Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           ---------->DOF2                                  <---------HSFB2a(1)  <---------ZAT14                                         --------->HSFB2a(1)  --------->ZAT14                                  <---------ZAT2 ---------ZAT14                                    --------->At4g35610 -------->ZAT14                                --------->TOE1(3)                                   -- -------->ZAT18                                --------->TOE2(3)                                ----- -------------AtSPL8     <------ZmHOX2a(1)     --------->YAB1                                   ----- ------ANAC58    --------->ANAC58              --------->AtMYB61       --------->ZAT6           ----- ------ANAC46    --------->ANAC58             --------->MYB46(3)       <---------ALFIN1--------->GLK1(2) ------ANAC58    --------->ANAC46 ---------->DOF2  --------->ZAT2    ----------->RAV1(1) --------->YAB1   agtgtacagagcaaagctccagccataggaacaccaaaatgcaattcaaccatagctggaacgtttggagccaacactgaaaccttgagaatcagaaaac  7121400                                  ------>ZmHOX2a(2)                                 <------ZmHOX2a(2)                                 --------->GLK1(1)                                 <---------GLK1(1)                                <---------ARR11(3)                                       --------->GLK1(1)  ------->GAMYB                 --------->ARR11(3)                          <----------ID1 --------->MYB46(3)             --------->ARR14(3)                   --------------->AGL15 <---------MYB52(2)             --------->ARR14(2)                 <---------STY1(2)----------->GT1 --------->RAV1(1)              <---------ARR14(3)            <-----------GT1       <----------ID1 ---->ANAC58                    <---------ARR14(2)          <---------AHL20(2)   --------->DAG2 ---->ANAC58                   --------->RVE1(1)        --------->AHL20(2) ----------->GT1 ---->ANAC46                ---------->DOF2 <---------AtLEC2--------->AHL20(2)  ---------->DOF2   gcaacaaactaagtttcgatctatgaacagaaaagatctccaaatagcatggaatcaactaattaaactagctaagaagggaaaaagggagaaatcgatg  7121500                                                                                                -----                                                                                             ------->TEIL                                                                                         ------->MYC2                                                                                         <-------MYC2                                                                                         ------->MYC4                                                                                         <-------MYC3                                                                                         <-------MYC4                                                                                         ------->PIF5                                                                                        --------->TGA1a                                                                                        --------->O2                                                                                        <--------ABF1                                                                                     <------NtERF2                                                                                     --------->ATERF1(1)                                                                          <---------O2  <---------TGA1a                                                                          --------->TGA1a------->MYC3                                                                          <---------TGA1a<-------PIF5                                                                          ========================bZIP_bZIP                                                                       ----------->HVH21<---------O2                                                               --------->ANAC58     ------>NtERF2                                    <---------ZAT2             --------->ANAC58     <----------------                                    --------->At4g35610        --------->ANAC46     <---------RAP2.3(1)                                    <---------At4g35610     ----------->HVH21      --------->PCF2----                                 <---------ANAC58           ----------->TGA1       <---------bZIP60(1)                                 <---------ANAC58        <---------ARR14(2)        --------->bZIP60(1)                       <---------MYB52(1)                --------->GLK1(2)--------->O2  <---------ANAC55(2)                      --------->LBD16                    --------->ARR14(2)        --------->ANAC46                    <---------LBD16 --------->ZAT2   <------NtERF2 <---------At4g35610  <---------ANAC46             <---------ALFIN1 --------->GLK1(2)--------->At4g35610 --------->At4g35610<---------ALFIN1         ----------->HVH21    <---------ARR14(2)   <---------DEAR3(1) <-----------HVH21------>NtERF2      <---------ARR14(2)     <---------GLK1(2) <---------At4g35610 <------NtERF2 <---------ATERF1(1)   aacgagaagttctgaccacatctccggtagagattccgagctgggagagagcggaggcgattctgacgcagcggtcacgagtctggcgccacgtgtactt  7121600                                                         <---------ZAT2                                                         <---------At4g35610                                              ===============HOX2a_HOX2a                                              ===================================HOX2a_HOX2a                                              ------>ZmHOX2a(2)                                             ====================================HOX2a_HOX2a                                            <---------ARR14(2)                                            <---------ARR11(3)                                            <---------AGP1                                            --------->AGP1                                            --------->ARR14(2)                                            --------->ARR11(3)                                        <---------At4g35610                                   --------->ANAC46      --------->At4g35610                              --------->ZAT14================HOX2a_HOX2a                  -----------                             <---------ANAC46<------ZmHOX2a(2)                           <------NtERF2                            --------->At4g35610       ================HOX2a_HOX2a       --------->LBD16   ------>NtERF2            <---------At4g35610       <------ZmHOX2a(1)                 <------NtERF2 ------>HVH21               <------NtERF2   <-----------ARR10             <------ZmHOX2a(1)  -------- -PIF3(1)               <-----------HVH21  <---------CCA1(2)   ------>ZmHOX2a(2)      <---------LBD16 ----->MYB52(1)     --------->GLK1(2)   --------->At4g35610    ==================HOX2a_HOX2a<--------   gacggagccataaacgatggagactctgtcagcgtagacgacagcagatctatcgaggaagctgatcggagtgagaggaacgtagttggccggagatttg  7121700                                         <---------ZAT18              <---------HSFB2a(2)                                  --------->DAG2                      --------->HSFB2a(2)                                 ---------->DOF2               <-------MYC2                               <------NtERF2                   <-------MYC3                              --------->LBD16                  ------->MYC3                             --------->LBD16                   ------->MYC2     --------->ANAC46 <---------AHL20(2) --------->ZAT18       <-------PIF5  <---------ZAT18  --------->ARR11(3)    <---------ZAT14 <---------ZAT18 >ARR10            <---------ARR11(3)<---------------AtSPL8    ------->PIF5      <---------AHL20(2) ->CCA1(2)     --------------------->WRI1--------->ZAT14<---------ANAC58   ----------->GT1 -ARR14(2)   <---------YAB1 <---------LBD16             <---------ANAC58 <------ZmHOX2a(1)  <--------   atagttccctccattttcatagattttatcgccggaaaagtagtacagtagtagttttgctcgctcgtgcatcgaggaggtatataatataagttaacta  7121800                                                                                                  ---                                                                                             <-------                                                                                          <---------ANAC58                                                                                          --------->At4g35610                                                                                          <---------bZIP60(2)                               <---------YAB1                                             ===========                        <---------ANAC58                                   ------>NtERF2  <---------At4g35610                        <---------ANAC46                               <---------ZAT18    <---------ANAC58                        <---------ANAC58<----------DOF2                <---------DEAR3(1) -----------                       ---------->ID1--------->ARR11(3)                --------->ZAT18   <-----------                   <-------GAMYB--------->YAB1                --------->YAB1            --------->ZAT18                  <---------MYB46(3) <---------ARR11(3)      <---------ATHB12          ----------->HVH21          ----------->RAV1(2)--------->YAB1                --------->WOX13(1)    <---------ZAT6  <--- ---GT1*TSS       --------->MYB52(2)<---------CCA1(2)    ------------>CBF  <---------ATERF1(1)  -----   ctctgtaatctagcctgagtttgttgtcgtattatcatatatcttttctatttgaattttgcaatcagactagtgggcgactactggtagtgacctgtcc  7121900                                        <---------AHL20(2)                                       --------->AHL20(2)                                       <---------AHL20(2)                                    <---------AHL20(2)                                    --------->AHL20(2)                                    --------->YAB1                                    <---------AHL20(1)                                    <--------ATHB1                                    <---------ICU4         <---------AHL20(2)        --------->ICU4       <---------AHL20(2)          <---------YAB1 ----------->RAV1(1)             --------->YAB1 --->NtERF2                      <---------ICU4 ----HVH21<---------YAB1        <---------YAB1 ============RAV                --------->ICU4 >RAV1(2)<---------AHL20(1)   --------->YAB1                                                       <- ------------TaNAC69(2)      --------->ICU4                                                <---------HSFB2a(2) ------ETT(1)                <---------YAB1                       --------->ATHB12         --------->HSFB2a(2) ---->DEAR3(2)             --------->YAB1                        <-------TEIL           ------->TEIL<   cgaccacatattatttttgctcaaacatgtcataataataattttatgttttttttttttgcacacattcatttgggatttagttcaatggacctggaag  7122000                                                              <---------WOX13(1)                    -                                                           <---------YAB1                          <-                                                         --------->YAB1                --------->At4g35610                                                     <---------YAB1                    <---------At4g35610            <---------HSFB2a(2)                      --------->ICU4                  <-----------RAV1(2)            --------->HSFB2a(2)                    --------->YAB1                   <---------------- <------MYB46(1)                     <-----------HVH21<---------ICU4          ------>MYB46(1)     --- <------MYB83                       <---------ZAT6----------->GT1             ------>MYB83       ---- -------P  ------>ZmHOX2a(2)<---------At4g35610   <---------ZAT6       <-----------HVH21         <--- ---------AtMYB61           --------->ZAT2      ----------->GT1  <---------GLK1(2)  -----------------   agttggtctatgatccagaagcagtcatcgagcttccagtgtcagacatgtagtgataattgtaattgattctggtcaccaaatcagccagatgagggaa  7122100                                                                                --------->DEAR3(1)                                                                               --------->ANAC58                                                                               --------->ANAC58   <---------ALFIN1                                                         --------->ZAT18 -------->PCF2                                                              <---------ZAT18 ----------HVH21                                                            --------->ZAT14 -AG       <<<<<<<<<TBF1                                             ---------->DOF2 ------>ALFIN1                         <---------MYB52(1)         --------->ANAC58 ----->HSFC1(2)                      <---------YAB1<-----------GT1--------->ANAC58 ------HSFC1(2)                   --------->ARR14(2)   <---------ZAT14      <---------ZAT14 >AGL1<---------GLK1(2)           <---------ARR14(2)   --------->ZAT14      <---------ABI4(2)   gtgtcccacattcttcttcgaagtcaatacctgcaagttccgatagtacatatttactaaactgagacaagaaaagagtgcaccgaagtttggatagagt  7122200                 --------->ANAC58                 --------->ANAC58                                                                 <--               ---------->DOF2                                                                    ---              <------ZmHOX2a(1)           <---------HSFB2a(2)                                    ----           <------ZmHOX2a(1)              --------->HSFB2a(2)                                   -----         <---------TOE2(3)    <---------HSFB2a(2)                                             <------     <---------------AGL15    ------>ZmHOX2a(1)                                           --------->At4g35610     --------------->AGL15    --------->HSFB2a(2)                                <---------At4g35610    --------->ZAT6     --------->ZAT14   <-----------------AGL1                  --------->At4g35610   ggtcttactctaaggaggaaagcaatacagtcctcgaattgtttctcgatgcggtctatctccatctcccatctagccttgatagctgaaactgctccac  7122300  Previous    Next  AGI:  At1g20560.1    Description:  AMP-dependent synthetase and ligase family protein. similar to AMP-dependent synthetase and ligase family protein [Arabidopsis thaliana] (TAIR:AT2G17650.1); similar to Putative AMP-binding protein [Oryza sativa (japonica cultivar-group)] (GB:AAN05508.1); similar to hypothetical protein OsI_005461 [Oryza sativa (indica cultivar-group)] (GB:EAY84228.1); similar to Os03g0133500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048876.1); contains InterPro domain AMP-dependent synthetase and ligase; (InterPro:IPR000873) Range:  from: 7119666    to: 7121807    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g20570.1    Description:  tubulin family protein. similar to EMB1427 (EMBRYO DEFECTIVE 1427), tubulin binding [Arabidopsis thaliana] (TAIR:AT1G80260.1); similar to hypothetical protein OsI_037774 [Oryza sativa (indica cultivar-group)] (GB:EAY83815.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61281.1); similar to hypothetical protein OsJ_006743 [Oryza sativa (japonica cultivar-group)] (GB:EAZ23260.1); contains InterPro domain Spc97/Spc98; (InterPro:IPR007259) Range:  from: 7122008    to: 7126549    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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