Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         ------>ZmHOX2a(2)                                                                                  ------>NtERF2                                                                                  <------NtERF2                                                                                 <---------RAP2.3(1)                                                                                 --------->LBD16                                                                                <---------DEAR3(1)                                                                                <---------RAP2.6(2)                                                                               <-------TEIL                                                                               <---------LBD16                                                                              --------->ALFIN1                                                                            <---------GLK1(1)                                                                            <---------At4g35610                                                                            --------->GLK1(1)                                                                            --------->At4g35610     -                                                                       --------->SPL7  ==============                                                                       <---------LBD16 ==============                                                                     <---------ZAT14  ===============                                                                     --------->ZAT18  ===============                               <-----------ARR10                     <---------SPL7   <------ZmHOX2a(2)                        <---------GLK1(1)                            --------->ZAT14 <---------ARR14(2)                        --------->GLK1(1)                          <---------------AtSPL3          <-          <---------ANAC46     --------->GLK1(2)                   <---------------AtSPL8       <----          <---------ANAC58    <---------GLK1(2)                   <------------------SPL14   -------- --ATHB12 <---------ANAC58<------ZmHOX2a(2)                 ---------->DOF2----------->ARR10---------   acaaaaacaatggcgttaagagacagagatcagaatctcatcaacaaggctattgagagagagaaagagagtgtacggagatgcggcgatcggaatcatc  7117800   --------->ALFIN1  <------ZmHOX2a(1) -------->ALFIN1 ========HOX2a_HOX2a                                                                              <-- =====HOX2a_HOX2a                                      <---------At4g35610                        <-- =====HOX2a_HOX2a                               --------->LBD16                               ------- ========HOX2a_HOX2a                       --------->At4g35610                           <---------MYB46(3) -----ZmHOX2a(1)                           --------->GLK1(1)                           <-------GAMYB -------RAV1(2)                           <---------ARR11(3)                          <---------MYB46(3) ->YAB1                                   --------->ARR11(3)    ---------->DOF2    ------------>AtMYB77 >ICU4                           <------ZmHOX2a(1)     --------->At4g35610   --------->MYB52(1)  ----   aggaggaggggaaagaatggagagaagagcgaagaggatgagaagagctccagagacagcgcaaatgaaaggaagaagacgacggagacggttgtagtaa  7117900          <-------GAMYB         --------->DEAR3(1)       --------->ABI4(1)       ------>NtERF2      <---------DEAR3(1)      --------->RAP2.3(3)      --------->RRTF1(3)      --------->RAP2.3(2)      --------->RRTF1(2)      --------->DEAR3(1)     --------->ERF1     --------->RRTF1(1)     --------->DEAR4(2)                        <-----------GT1     --------->DEAR3(2)                     <----------DOF2     --------->ORA47(2)                     <---------DAG2     --------->RAP2.3(1)                  ------>NtERF2     <------NtERF2                      --------->DEAR4(2)     --------->RAP2.6(1)                <------NtERF2     --------->ATERF1(1)                ------>NtERF2    ------>NtERF2                       --------->RAP2.3(1)    <---------ATERF1(1)                <---------ATERF1(1)    <---------RAP2.3(1)                <---------DEAR4(2)    <---------RRTF1(1)                --------->ANAC46   <---------RAP2.3(2)                <---------DEAR3(1)         ----------->HVH21            <------   <---------ANAC58                  <-------MYC3             ------>NtERF2         <---------ANAC58   <---------ANAC58                  <---------LBD16         --------->ANAC46       <---------ANAC58 ---------RAV1(1)--------->ANAC58    ------->MYC3            --------->ANAC58       <---------ANAC46 -------ICU4     --------->ANAC58   --------->ANAC46         --------->ANAC58      <-------TEIL  <--- -->ICU4<------NtERF2               <---------O2        <-----------ARR10         --------->GLK1(2) ----->ICU4    ---------->DOF2   <---------REM1(2)--------->TOE2(3)              <---------GLK1(2)   ttgttgcgccgccgttgaaaagccattgaaggctatacacgcggcgcttttaccttcgtctctacgccagacagagagagagagattcgtgttccaatgg  7118000                              <<<<<<<<<<<<<<<<<LFY                             <---------ZAT14                             --------->ZAT14                             <---------ZAT18                         --------->ZAT6                                         <---------AHL20(2)        ---------->DOF2  <---------------AtSPL8                                <---------AHL20(2) ---ATHB12          <----------DOF2                      ---------->DOF2   <---------MYB52(1) -------ID1   <----------DOF2--------->ZAT18     <-------TEIL        <---------ZAT14  <---------YAB1   agacaaaaccaaaagtctttctctttaagagtacacactggtttcaagagattcaaaatgaaagtattgtctgttctgttttttatttgtgattcttctc  7118100                                      <---------GLK1(2)                                <---------YAB1                              --------->YAB1                              --------->ATHB12                              <---------ICU4                              -------->ATHB1                             <---------ATHB12               --------->YAB1                             <---------YAB1                <---------ATHB12    <---------AHL20(2)      --------->ANAC58       --------->ICU4              --------->WOX13(1)--------->AHL20(2)      --------->ANAC46     --------->YAB1          *TSS------------>CBF  --------->AHL20(2)      --------->ANAC58     <---------ICU4       <----------DOF2  <------------CBF        <-------TEIL    <-----------GT1       --------->ICU4    <---------CCA1(2)   --------->ATHB12        --------->CCA1(2)   tggttttcacgacatttccatcaccacaataatcattgttgattctctatcttttgcttcaatcaaagattgaatttttatatacttgagatacagaaac  7118200                                                                                                    -                          ---------->DOF2                                                           -                  <---------YAB1                                                                    -               <---------AHL20(2)                                                                   <               --------->AHL20(2)                                                                   -            --------->AHL20(2)   ----------->GT1                                                    -            <---------AHL20(2) ---------->DOF2                                                     <-     <------------CBF ----------->GT1   <------------CBF                 <---------GLK1(1) --------->CCA1(2)    --------->ATHB12<------------CBF  <---------YAB1              <---------YAB1      ---------->DOF2   agagaaagattgaattttttaatattgtaaaaggaaagtgaatattgttttttggttttgagacagttcttatagatttctgggctctgaaagaaatgag  7118300                                                  <-----------GT1          <---------ALFIN1                       <---------YAB1     ------>NtERF2                             -------->ATHB1    --------->DEAR3(1)                         --------->YAB1  ------>NtERF2                                <---------ICU4  --------->ABI4(1)                            -------->HAHB4  <---------ATERF1(1)                          <--------HAHB4 --------->DEAR3(1)                            --------->ATHB51       --------->AHL20(1) <---------ALFIN1                             --------->ICU4          --------->AHL20(2) --------->DREB2C(2)                       <---------AHL20(2)         <---------AHL20(2) -------->DEAR4(2)                         --------->AHL20(2)        --------->AHL20(2) -------->ATERF1(1)                    <---------YAB1            --------->YAB1 -------->RAP2.3(1)                 <---------AHL20(1)       --------->AHL20(2) ------NtERF2    <---------MYB52(1) <---------AHL20(2)  ------>ZmHOX2a(1) -------->ORA47(2)                  --------->AHL20(2) --------->TOE2(3) -------->DEAR3(2)            <----------DOF2 <---------ATHB51--------->WOX13(1)   <----------DOF2 --------ATERF1(1)            <---------DAG2  <---------YAB1 <---------AHL20(2) <-----------GT1   gcaccgcctccagcacttcgttgttctaacagctttattttatttttaattattactccttaattaatcaaattaattgtttttactttggtgataaact  7118400                                                                    <---------AHL20(2)           <---                                                                ----------->GT1               <------                                                            <---------AHL20(2)                ------- --------->At4g35610                                   <---------ANAC58                      -------- <---------At4g35610                                   <---------ANAC58                <---------ANAC58 --------->ZAT2             ---------->DOF2<---------ANAC58 <---------YAB1  ------>ZmHOX2a(1)<------- <---------ZAT2      <---------AtLEC2      <---------ANAC58--------->AHL20(2)          <---------ANAC58   atgagctggattttaagagttttgcaagatgaaagttattctatttcttgctctatttcgttttaattgttaaatttcctgttttttttgcttaatttta  7118500 ------YAB1 ---AHL20(2)                                                                --------->ANAC46 -->AHL20(2)        --------->CCA1(2)                          ---------->DOF2 ->AHL20(2)--------->ICU4                 --------->ZAT6   --------->ZAT6   --------->ANAC58 --AHL20(2)<---------YAB1              <---------ZAT18   >>>>>>>>>WRKY18    --------->ANAC58   ttcttatctagacattattaagagataagtttagcattttgtgaacactaactaaattttgacagtagagcaagttgcaagctatgtgtttattctgaaa  7118600                                              <---------ICU4                                             --------->ICU4                                        ----------->GT1                                        <---------ANAC46    <----------DOF2                         -                                   --------->YAB1          <---------ANAC58                 <--------                                   <---------ICU4          <---------ANAC58                <---------ICU4                                --------->TOE2(3)<-----------GT1                      <-----------GT1      <----------DOF2          ----------------->AG   <----------DOF2              <---------AHL20(2)   tgaaatcactttagaaccattactgtctaaatttccataatggtgtaaatattactctttggctttacatttgtatcatccctatttttttcatctttat  7118700  Previous    Next  AGI:  At1g20550.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G76270.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62021.1); contains InterPro domain Protein of unknown function DUF246, plant (InterPro:IPR004348) Range:  from: 7115231    to: 7118151    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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