Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               <---------WOX13(1)                                            <---------ANAC58                                            <---------ANAC58                                            <-------GAMYB                                           --------->MYB55(2)                                  <-----                                           <------MYB83                                   <---------AtLEC2                                           --------->MYB52(2)                             <---------ANAC58                                           <---------MYB46(3)                             <---------ANAC58  --------->AHL20(2)                       <------MYB46(1)                       <---------ANAC58 --------RVE1(1)                          <---------AtMYB61                      <---------ANAC58 ------>ARR11(3)                          <---------TOE2(2)                      <---------ANAC46 -------ARR11(3)                   <----------DOF2                         <---------TOE2(3)   <----- ------>ARR10                   <-----------GT1      <---------ICU4    --------->YAB1<---------AtLEC2 --ANAC46                  --------->YAB1<---------MYB52(1) ------>ZmHOX2a(1)   --------->MYB52(2)   gatttttaatatgctattgtcagtttttttcatatttctttacgttggttgacaaacatttcctagtcgtcaattctaatgttacttgcattgcatggct  7112200                                                            --------->ANAC55(2)                                                            --------->ANAC58                       --                                               --------->YAB1                                     ---                                               <---------ICU4                                     ---                                             --------->ARR11(3)                                   ---                                 --------->MYB52(1)  --------->ANAC58                             ---                              <---------ANAC55(2)    --------->ANAC58      <----------DOF2      -----                              --------->ANAC55(2)  ---------->DOF2        <---------ANAC58    -------                      <---------ICU4 <-----------HVH21  <-----------HVH21 <---------ANAC58    <------    --------->YAB1    --------->ATHB12    --------->AHL20(2)<---------ANAC55(2)      --------->O2 --- ----ANAC58          <---------YAB1 ------->GAMYB<---------YAB1      <-----------RAV1(1)  --------->DOF5.7(2) ----ANAC58        --------->ANAC46<------------MYB.PH3(1)  --------->ANAC58         <---------O2 ---   tcgcaaaaatactcaaaaaacacatcattgttaagtaacggtcataaaatcatgaaagcatcacgtactatctgtggctttactaagacgtcgttaacaa  7112300    --------->YAB1    -------->HAHB4    <---------ICU4   --------->ICU4   <---------YAB1 ---------------->ATHB9 ------>ANAC55(2)                    <---------ARR11(3) ------>ANAC46                     <---------YAB1 ------>ANAC55(1)                  --------->ICU4 ------>ANAC58                   --------->YAB1 ---->MYB52(1)             <---------WOX13(1)                                            <---------MYB59 -->MYB46(3)             <---------MYB46(3)             <---------ANAC58        ----------->HVH21 ---MYB52(2)             --------->ATHB12               <---------ANAC58      <---------ICU4 ------>YAB1            <---------YAB1  <---------AHL20(2)                   --------->ICU4 ------>ANAC58<----------DOF2   <-------TEIL   <----------DOF2          ----------->GT1------>NtERF2   acgtaatgataacattcttttttctggtgattgattcatgattttatgccttttttttgggtgatcaaacaacgttgtaactatgaccgggcctaataga  7112400                                                                  <---------HSFB2a(2)                                                                  --------->HSFB2a(2)                                                           <---------YAB1                                                           --------->ICU4                              ----------->GT1            --------->YAB1                           <---------MYB52(1)           ----------->GT1                     <---------WRKY18(1)                <---------ZAT6                    --------->WRKY38(1)               ----------->GT1                    ----------->HVH21               <---------ZAT14                                 -                    --------->WRKY12           <---------ZAT6  <---------AHL20(2) ------->TEIL  -----   catctatgggactctaattccattgacccgttttgtaacatatatactagagtgagtagtgataatttatagaaatttgatatgtatatgtctctgagta  7112500                                                                                                -----                                                                                           --------->ZAT2                                                                                           <---------ZAT2                                                                                     --------->At4g35610                                            --------->MYB59                       --------->At4g35610                                          <<<<<<<<<MYB98                         --------->GLK1(2)              --------->TOE2(2)  --------------->AGL15                --------->ANAC46     <---------At4g35610              --------->TOE1(2)  <----------DOF2                      --------->ANAC58     --------->At4g35610        ----------->GT1          <---------------AGL15                --------->ANAC58 <-----------HVH21      <------------CBF           <---------DAG2                     --------->ZAT6<---------At4g35610 ---------->GT1              ----------->HVH21                --------->ZAT6     --------->ARR14(2) ---->MYB111(1)      <------------CBF   <---------TOE2(3)  --------->WOX13(1)   <---------GLK1(2)   gttagtgaaattgtaacataagagattgggcctgactttattaagttaggcccattaatgtctatcactaacacgaaaaccagcatctgcttcagctcgt  7112600                                 ----------->HVH21                               <---------ZAT2                               <---------At4g35610                               --------->ANAC55(2)                               --------->At4g35610               --------->ARR14(1)                               <---------TGA1a                  --------->ARR11(1)                               --------->O2                     --------->ARR14(2)                               --------->ZAT2                   <---------ARR14(2)       --------->YAB1                      ----------->RAV1(2)         <------ZmHOX2a(2)                     <-------TEIL                    <---------ANAC58             <-----------ARR10                --------->ANAC55(2)         --------->TOE2(3)     --------->TGA1a   --------->ARR14(2)               <---------ANAC55(2)        ----------->RAV1(2)    <---------O2      <---------ARR14(2)               --------->At4g35610       -------->P   <---------ANAC58             --------->ARR11(3)             <-----------RAV1(2) *TSS  ==================================MYC_MYB <---------ARR11(3)           <-----------HVH21 ----->ID1     <---------ICU4<-----------RAV1(2)<------ZmHOX2a(1)--------->CCA1(2)<---------At4g35610   cgtcttctctacctgaatcagtgcgtctggctcaggtgacaatgcaaggaggatcatcgggtattggatacggtttgaagtatcaggtgattcatcatct  7112700                                      --------->ANAC58                                 ---------->DOF2                           --------->GLK1(2)                          <---------ARR14(2)                          --------->ARR14(2)                          --------->ARR11(3)                          <---------GLK1(2)                          <---------ARR11(3)                         <---------HSFC1(2)                         <---------HSFB2a(1)                  ------>ZmHOX2a(1)   --------->ANAC58                                              -                 --------->TOE2(3)    --------->ANAC46                                   --------->ANAC55(2)              <-----------GT1 <----------DOF2                                            <---------ANAC55(2)        ------>ZmHOX2a(1)--------->HSFB2a(1)                                          --------->ARR14(2)       --------->TOE1(3) --------->HSFC1(2)                                           <---------ARR14(2)       --------->TOE2(3)----------->ARR10 --------->GLK1(1)                          <---------RAP2.6(3)    <-----------GT1   <------ZmHOX2a(1)   <---------GLK1(1)        ------->TEIL---------->DOF2      -   tcatattttccttaattttccttaggaagattctttaaagacggaattcattttgtttcagtctagatgtatatcggatgtgaaagccgatacggattac  7112800                                                                                                 ----                                                                                           <---------ARR14(2)                                                                                           --------->ARR14(2)                                                                                           --------->ARR11(3)                                                      <---------ANAC58                     <---------ARR11(3)                                                      <---------ANAC58                   ----------->ARR10               <---------GLK1(1)                   <---------CCA1(2)                  <------NtERF2   <----------DOF2                       <---------ANAC46           <---------ANAC58 <---------HSFB2a(2) -------->ANAC58                         --------->At4g35610        <---------ANAC58 --------->HSFB2a(2) -------->ANAC58           ---------->DOF2    ------->TEIL    <---------YAB1        <---------LBD16   acaagctttctcactggaactcttagtttaaaagaagaaaatgaggtgaacccatgtcttgattttgatttcgtcttctattttagtcgggaagatactg  7112900                                                                        ------>ZmHOX2a(2)                                                                       <---------At4g35610                                                                      <---------AGP1                                                                      <---------ARR11(3)                                                                      --------->ARR14(2)                                                                      <-----------ARR10                                                                      <---------ARR14(2)                                                                    <---------MYB46(3)                                           <-------TEIL         <-----------RAV1(1)                                  <----------DOF2             --------->At4g35610                    ----------->RAV1(1)<---------TOE1(3)      ----------->RAV1(2)       <---------MYB52(1)    <---------At4g35610       <---------MYB52(1)   <---------At4g35610 ------>DOF2       --------->ANAC46    <---------TOE2(3)      <---------At4g35610            <-------   aaagttttcgttttttgttctccaccatttgagatgcttttaaggttcatcttcttcgtttgtcatctggtggatctgagcttatatgtgagggtttgtt  7113000                                                                                             <-------                                    <----------DOF2         --------->DEAR3(1)     <---------ANAC58                             <---------ANAC58 --------->ANAC46                --------->ARR14(2)                          <---------ANAC58    --------->ANAC58                <---------ARR14(2)-----              --------->CCA1(2)  ---------->ID1          <---------ALFIN1----------->GT1<---------ANAC58      ------>ZmHOX2a(1)   <---------ANAC58 <---------WRKY38(1)       <---------ALFIN1   <---------ANAC58 --MYB46(3)----------->ARR10 <---------ANAC58 --------->ANAC58      <---------ZAT14<---------ANAC58   ctctcatcctaatgagatttgggaccttgcttcttgcccttttgatcaacgcattttctccaccgtcttctccactggtaaattcgcttgtcttgagttg  7113100  Previous    Next  AGI:  At1g20540.1    Description:  transducin family protein / WD-40 repeat family protein. similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT1G76260.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62019.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 7112601    to: 7115352    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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