Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              <------NtERF2           --------->LBD16          <---------DEAR3(1)          <---------ANAC46         <---------LBD16         <------NtERF2         <---------ABI4(1)         --------->ATERF1(1)         --------->At4g35610        <---------DEAR4(2)        <---------ORA47(2)        <---------RAP2.3(1)        <---------RRTF1(1)        <---------RAP2.6(1)        <---------ATERF1(1)        <---------ERF1        ------>NtERF2       <---------ANAC46       --------->ATERF1(2)       <---------RAP2.3(2)       <---------ATERF1(2)       --------->DEAR3(1)       <---------RAP2.6(2)       <---------RRTF1(3)       <---------RAP2.3(3)       <---------RRTF1(2)       <---------DEAR3(1)       --------->ALFIN1      <---------ABI4(1)      ------>NtERF2      <------NtERF2  --------->HSFB2a(2)      --------->ATERF1(1)     <---------RAP2.3(1)     --------->TOE1(2)     <---------ATERF1(1)    <---------HSFB2a(1)     <---------RRTF1(1)     <---------HSFC1(2)     <---------ERF1  <---------HSFB2a(2)    <---------RRTF1(3)      <---------ZAT2    <---------RAP2.6(2)     --------->ZAT2    <---------DEAR3(1)      --------->HSFC1(2)    <---------RRTF1(2)--------->LBD16    <---------RAP2.3(2)     --------->At4g35610    <---------RAP2.3(3)    --------->GLK1(2)   <---------LBD16  <---------LBD16                                                                <- ----------DOF2    <---------LBD16                                =======================HOX2a_HOX2a --->HSFB2a(1) --------->ARR14(2)                                 ------>ZmHOX2a(1)               --- ----At4g35610 <---------GLK1(2)                                  ========================HOX2a_HOX2a --->HSFC1(2)  --------->ARR11(3)                                --------->TOE1(3)            <------ ----HSFC1(2)----------->ARR10          <---------REM1(1)        --------->TOE2(3)            ------- ----HSFB2a(1) <---------ARR11(3)     <---------ANAC46  --------->ARR14(2)         ------>ZmHOX2a(2) --->At4g35610 <---------ARR14(2)    --------->ALFIN1   <---------ARR14(2)        <------ZmHOX2a(2)<- ----ZAT2<---------At4g35610<---------At4g35610   <------ZmHOX2a(1)              --------->ARR11(3)<-   ttctttgcggcggcggagattttcgggagaagctgcgatgtggtgaaggcgaggactggatttgaatccttaatctgtttagcgatctcgtttgaagtgt  7105500                                                                                             <-------             <---------MYB46(3)                                                              <-------            --------->ALFIN1                                                                 --------       <---------ANAC58                                                                      <-------       <---------ANAC46              --------->MYB52(1)                                      <-------       <---------ANAC58             ----------->TGA1                                         --------      <-------TEIL   <---------WOX13(1)                                                      <-------    --------->ARR14(2)   ------>NtERF2 <---------ANAC46                                      ========    <---------ARR14(2)  <---------ANAC46    <----------ID1                                   <------- --------ANAC58    --------->ATHB12 ----------->HVH21          <---------AHL20(2)       <------ZmHOX2a(1) ------>ATHB12     <---------ICU4 <---------bZIP60(2)         <---------AHL20(2)     <------ZmHOX2a(1) ---ZAT6    <---------AtMYB61     <---------bZIP60(1)         --------->AHL20(2)   --------->ALFIN1 -->ALFIN1  <---------ANAC46   ----------->HVH21   ----------->HVH21              <------ZmHOX2a(1) < --------ANAC58   <---------YAB1  <---------O2   --------->MYB52(1)             --------->ALFIN1  <-- --------ANAC46   --------->ICU4  --------->bZIP60(1) <---------ANAC46    <---------LBD16--------->SPL7   tgagtggattcgtggtggtgatgattgcgcctagtgacatgacggagagacaaacgacggggaataaaattgagtttggggagaggaggaggacgacgtg  7105600                                                 --------->bZIP60(2)                                                 --------->ANAC58                                                 --------->ANAC46                                             <-----------HVH21                                            --------->ANAC58                                            --------->bZIP60(2)       --------->ARR14(2)                   --------->O2    <---------ANAC58                        --------->ANAC46    <---------ANAC58                        --------->ANAC58 --ANAC46                                  <---------LBD16 --O2  --------->GLK1(2)              <---------ARR14(2) ->TGA1a                              --------->ARR14(2) --ANAC58                          <---------ANAC46 --bZIP60(2)                      --------->ATERF1(1) ->O2  <---------ARR14(2)         <------NtERF2 --------->SPL7----------->HVH21 --TGA1a                         <---------ATERF1(1)       <---------DEAR3(1)           --------->HSFB2a(1) ==========bZIP_DOF              ------>NtERF2 <---------ALFIN1                         <---------HSFC1(2) --ANAC58   <---------CCA1(2)   --------->DEAR3(1)      --------->ZAT2      ----------->HVH21 ----------DOF2                 ----------->HVH21--------->ANAC58   --------->ALFIN1    <---------HSFB2a(1) -------ANAC46  <---------LBD16 <---------DEAR3(1)      <---------ZAT2<---------AtMYB61 --------->HSFC1(2)   gcctttgcgaatccctatctcggagagacaatcggcgacggattccacggcacgccatagctcggtgaaggtgaggttttgacctgtggaagcgtcgatg  7105700                                                     <---------WOX13(1)                                           --------->TGA1a                                           --------->O2                                           --------->bZIP60(1)                                           <---------ANAC46       --------->ALFIN1                                           <---------O2 <---------ARR14(2)                                           <---------TGA1a      <------NtERF2                                           <---------bZIP60(2) --------->LBD16                                           <---------bZIP60(1)<---------ANAC46              =======================================MYC_MYB  <---------ANAC58        --------->At4g35610              <----------CDC5             ----------->STF1    <---------ANAC58     <---------MYB52(1)     --------->SPL7<---------ANAC58      <---------TGA2(2)   <<<<<<<<<E2Fc <------MYB46(1)    --------->CCA1(2)                   ----------->TGA1--------->ARR14(2) <------MYB83   <---------SPL7  <---------ANAC58     ----------->HVH21    <<<<<<<<<E2Fd<---------AtMYB61   --------->ARR14(2)            ====================bZIP_DOF<---------LBD16     --------->MYB52(2)   <---------ARR14(2)            ---------->DOF2  ----------->HVH21 --------->ALFIN1 --------->MYB52(2)   aaggcgatacggccacgatgagcttgtgaagaaatgaaagtagtgacgtcgagtgatggatttggcgggagtgggattggtgttcgtttgctgtagaatg  7105800                                                                                          <---------TOE1(3)                                     --------->ANAC58                              --------->AHL20(2)                                     --------->ANAC58                              <---------AHL20(2)                                   ---------->DOF2                     <---------ZAT14    <---------YAB1                            --------->ARR14(2)                         --------->ZAT14 <---------AHL20(2)                            <---------ARR14(2)                         *TSS       <---------AHL20(2)                        --------->HSFC1(1)                            <<<<<<<<<<<<<<<<<LFY<---------TOE2(3)                        <---------HSFB2a(2)                        --------->ZAT6 <---------AHL20(1)                        --------->HSFB2a(2)                 ------->TEIL          --------->AHL20(1)           <---------HSFB2a(2)     --------->ZAT14          <-----------GT1       --------->AHL20(2)   ttgagtttgagttgcagaaaccacttcgagaattcactgaagccatggattttgtttctatgtaacttgacactacagtggaaatttaatttatggttga  7105900                                                       <---------ANAC58                                                       <---------ANAC46                     --------->YAB1                    <---------ANAC58    <-----------GT1        <--                 <---------YAB1                       <------NtERF2--------->LBD16                ---               --------->YAB1                       <---------DEAR3(1)    <-----------GT1        ----             <-----------TBP          <---------At4g35610         --------->ANAC55(2)      <-------GAMYB           <----------DOF2            --------->At4g35610         <---------ANAC46         ==========           <---------DAG2---------->DOF2          <-------MYC3    <---------ANAC55(2)     <---------MYB46(3) <------ZmHOX2a(1)--------->YAB1---------->DOF2   ------->MYC3   <---------LBD16     <-----------RAV1(2)   gaaggaggtttgactttttataataagaaaagtctaaagcagccgaagaacacgttggcgttcttgttccgcgatatttccaattctccaggtcgttgtt  7106000            --------->GLK1(2)     ------->MYC2     <-------PIF5     ------->PIF5     ------->PIF4                                   <---------PCF2     ------->MYC4                                   --------->TCP20     <-------MYC2                                  --------->ATERF1(1)     <-------PIF4                           <---------ANAC55(2)     <-------MYC3                           --------->ANAC55(2)     ------->MYC3                           --------->O2     <-------MYC4                           <---------ANAC55(1)    <---------O2                            <---------ANAC46    --------->ANAC58                        <---------O2    --------->ANAC58                        <---------ANAC58    --------->O2                            <---------TGA1a    <---------ANAC55(2)                     ========================bZIP_DOF    <---------TGA1a                         ===========================================bZIP_DOF    --------->TGA1a                         --------->bZIP60(1)    --------->ANAC55(2)                     <---------bZIP60(2)              <---------MYB52(1)  <---------ALFIN1                       ----------->TGA1<----------DOF2    <----------DOF2 <------NtERF2               <---------TOE2(3)   --------->ALFIN1          <----------DOF2 -------At4g35610           --------->MYB52(1)--------->ALFIN1     <---------YAB1            -------- ------>At4g35610           <-----------GT1 <---------bZIP60(1)   <---------AHL20(2)       ---------- ----->MYB52(2)           <---------MYB52(2)<---------ANAC58     --------->YAB1     ---------->DOF2 =============MYC_MYB   --------->WOX13(1) ----------->STF1  <---------TOE2(3) ----------->GT1   agcggcacgtgaagaatatgttttttcaattaacgaattgaaaatgacgtggtggagcccttttagattataatgggcctttagttaaaagcccaaagag  7106100                                               <----------DOF2                                               <---------------AGL15                                          <------------CBF                                         <-                                         <------ZmHOX2a(1)                 ----------->HVH21     <---                                        <------MYB46(1)                  <---------ANAC58        <---                                        <------MYB83                     <---------AtLEC2     <------NtERF2                --------->ANAC58      <--------P                         <---------ANAC58     <------                --------->ANAC58   --------->LBD16                    <----------DOF2        <------- -->DOF2        --------->ANAC46  --------->LBD16      *TSS          <---------ANAC58        -------- >DOF2        <---------ALFIN1   <---------LBD16<---------ZAT14      <---------ANAC58      <---------LBD16   ccgaatcgatattcacacacgcttgaactgaatcacccgggtaggattgctatactgggagaagagcaagcgcttgcctgactgaaatgtgaagccggaa  7106200       <---------ANAC46      <---------LBD16    --------->ARR14(2)    <---------ARR14(2) <------MYB83                                                      <---------ARR14(2) <------MYB46(1)                                               <---------HSFB2a(2) ----------------------->TaNAC69(2)                            <---------HSFC1(1) -------P                                                      --------->HSFC1(1) ---MYB83                                                      --------->HSFB2a(2) ---MYB46(1)                                           --------->GLK1(1) ---MYB52(1)                                          <---------ARR14(2)              -------->P --RAP2.6(3) ------->TEIL   ---------->ID1            --------->ARR14(2)     --------->ICU4 ->LBD16--------->LBD16 <----------DOF2            <---------TOE1(3)       <---------MYB46(3)     <--   ggtagggttccggtgaacctctctctctttgtctctctgtaattgagcatgttagggatatgtttctagaattcgggtgattactacttaccttggattt  7106300                                      --------->ANAC58                                    --------->At4g35610                                 <------ZmHOX2a(2)                     <---------ARR14(2)        <---------YAB1                     --------->ARR14(2)     <---------AHL20(2)                    <------ZmHOX2a(1) --------->ANAC58           <---------YAB1       <-----------HVH21                               ---------->DOF2 ------->TEIL       ====================HOX2a_HOX2a                     ---------->DOF2 -------YAB1--------->YAB1     <------ZmHOX2a(1) <----------DOF2   <---------YAB1   atgaatcaatttgataataagaggaactgatcaggatcagaggcaatttatctttgtttctcatacattttgatcaaagaagtaatgcgacttggtttaa  7106400  Previous    Next  AGI:  At1g20510.1    Description:  OPCL1 (OPC-8:0 COA LIGASE1); 4-coumarate-CoA ligase. Identical to 4-coumarate--CoA ligase-like 5 (4CLL5) [Arabidopsis Thaliana] (GB:Q84P21;GB:Q9C5H2;GB:Q9LMV8); similar to 4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein [Arabidopsis thaliana] (TAIR:AT1G20480.1); similar to 4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein [Arabidopsis thaliana] (TAIR:AT5G38120.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74074.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62011.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62012.1); contains Inter Range:  from: 7103444    to: 7105871    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g20515.1    Description:  other RNA Range:  from: 7106155    to: 7107967    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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