Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  <----                                                                                                -----                                                                                               <-----                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                            <--------     <------NtERF2                                                                          <--------    ------>NtERF2                                                                  ----------->GT1   <---------ANAC58                                                                <---------MYB46(3)   <---------ANAC58                                                               --------->ALFIN1   <---------ANAC46                                                               <---------DEAR3(1)  <------NtERF2                                                                   <---------AtMYB61 ---------->HVH21                                                                <---------ABI4(1) ------>ZAT2                                                                     <------NtERF2 <----- -------ZAT2                                                                     <-------GAMYB------- -------At4g35610                      --------->GLK1(2)                        <---------MYB46(3) -------->RAV1(2)                     --------->WOX13(1)                       <---------RAP2.6(2) ------>At4g35610                   <------NtERF2                              <---------ANAC46------ -->NtERF2                        <---------ETT(2)                             <---------DEAR3(1)---- -----ATERF1(2)                   --------->ETT(1)                             <---------DREB2C(2)--- ---->ATERF1(2)                   --------->ATERF1(2)                         <------NtERF2--------->ANAC46 -------RAV1(2)                   <---------ATERF1(2)      --------->LBD16  <---------DEAR3(1)<------ -NtERF2   --------->ZAT14       --------->RAP2.6(3)     <---------LBD16 <-----------RAV1(1)<-------- --->ATERF1(1)                 <-----------RAV1(1)     <-----------GT1   --------->ALFIN1--------->MYB52(1)   agctggcgcgtagtgaagacgagagttggattactgtcggcaatctgtttggagatttcaccggaagtattgagagtgttggcggtggtgaaaacggcgc  7102500                                                                    <------NtERF2                                                                   ------>NtERF2       --------->MYB52(1)                                         <---------DEAR3(1)      ----------->HVH21                                           --------->DEAR3(1)      ----------->TGA1                                           --------->ATERF1(1) --NtERF2                                                       <-----------HVH21 ---->ATERF1(1)                                                 <---------ATERF1(1) ----RAP2.3(1)                                                 <---------DEAR3(1) ->ATERF1(1)                                                   <---------TGA1a --ABI4(2)                                                     --------->bZIP60(1) ->RAP2.3(1)                                                   --------->O2 -ATERF1(1)                                                    <---------O2 -RAP2.3(1)                                                    --------->TGA1a ----ATERF1(1)                                                 <---------bZIP60(1) -->DEAR3(1)             ------->GAMYB                         --------->bZIP60(2) >NtERF2 <---------ANAC46================================================MYC_MYB ----->DEAR3(1)       --------->MYB52(1)                       <---------bZIP60(2) --->NtERF2        --------->ANAC58                        --------->SPL7 ---DEAR3(1)       --------->ANAC58                       <------ZmHOX2a(1)              <---------YAB1 -DEAR4(2) <---------------------WRI1               <------ZmHOX2a(1)        <---------ARR14(2)   cgagagacatgacggagaggcaaacaacgggaatgaagatggagtttggagaaaggatgaggacgacgtcgcctcttcgtattccgacttcatgatatag  7102600                  ------>NtERF2                 <---------DEAR3(1)              ----------->HVH21              <---------ETT(2)              --------->ETT(2)             <------ZmHOX2a(2)         ------>NtERF2        --------->ANAC58        --------->ANAC58       --------->ATERF1(1)       <------NtERF2      <---------ATERF1(1)                                     <---------ANAC46      ------>NtERF2                                           --------->DEAR3(1)     --------->DEAR3(1)                                      --------->At4g35610     <---------DEAR3(1)                                 ----------->HVH21    <---------ARR14(2)     ----------->HVH21                      --------->ANAC58 --------->ATERF1(1)          --------->ALFIN1    <------NtERF2<---------RAP2.3(2)        --------->ANAC58 <------NtERF2   --------->ARR14(2)    --------->ATERF1(1)         ------>ZmHOX2a(2)     <-----------RAV1(1)   =========================    --------->RAP2.3(1)        <------ZmHOX2a(2)    <---------ANAC58        <-------GAMYB <---------RAP2.6(2)   <---------RAP2.3(1)       --------->GLK1(1)      <---------ANAC46      <---------DEAR3(1)        <   <---------ATERF1(1)       <---------GLK1(1)      <---------ANAC58 ---------->DOF2    --------->ALFIN1   <---------ORA47(2)     --------->LBD16 ---------->DOF2    <---------At4g35610        <-----------RAV1(1)  <---------DEAR3(1) --------->GLK1(1) ----------->GT1--------->ALFIN1    <---------RAP2.6(2)<-------   acagtcggcgacgcgatcgacggctctccagagatcggagaaggttaagcactggcctgtggcagcgtcgataaaggcggttttgccacggtgtggctga  7102700                         ---------->DOF2                       --------->ANAC58                       --------->ANAC58                       --------->ANAC46                     --------->ANAC58                     <---------ANAC55(2)                     --------->ANAC58                  ----------->HVH21                  --------->TGA2(2)                 <-----------HVH21                ====================bZIP_DOF                --------->bZIP60(1)                <---------TGA2(1)                <---------bZIP60(2)                <---------bZIP60(1)                --------->ANAC58                <---------ANAC58                --------->bZIP60(2)                <---------TGA1a                <---------ANAC58                --------->TGA2(1)                <---------ANAC55(2)                --------->ANAC55(2)                ===========================================MYC_MYB                ================================================MYC_MYB                --------->ANAC58                --------->TGA1a      <------NtERF2                <---------O2 --------->ARR11(3)         <-------GAMYB                --------->O2 --------->ARR14(2)         <---------ANAC58               <-----------STF1     --------->LBD16     --------->ATERF1(1)               ----------->STF1    <---------ANAC58     <---------ANAC58              <---------TGA2(2)    <---------ANAC46    <---------MYB46(3)             ----------->TGA1<---------ARR14(2)      <------NtERF2             ----------->HVH21--------->CCA1(2)     <------MYB46(1)                                 =       ------->TEIL  <---------O2  <---------ANAC58 <------MYB83                                    <  --------->At4g35610--------->O2 <<<<<<<<<E2Fc    <---------DEAR3(1)                               = =========================MYC_MYB <<<<<<<<<E2Fd --------->ATHB12                                 <--- ------ZmHOX2a(1)<-----------TGA1 <---------LBD16 <--------P                  --------->ATHB12   ---- --ANAC46 --------->ALFIN1   --------->ARR11(1) <---------MYB46(3)       <---------ZAT6          ----   gaggagatgaatgtggtgacgtcacgcgaaagatttggcgggagacttaatggttggcgcttgctatagaatgtagagtttgatttgcagaaaccacttc  7102800                            --------->ANAC58                            --------->ANAC58                            --------->ANAC55(2)                            --------->ANAC46                          --------->CCA1(2)                          --------->ARR14(1)                         --------->ARR11(1)                         --------->ARR14(2)                         <---------ARR14(2)                        <------ZmHOX2a(1)                 ==============HOX2a_HOX2a                --------->GLK1(1)                                          ---------->DOF2                <------ZmHOX2a(2)                                      ------->TEIL               --------->ARR11(3)                                 <------ZmHOX2a(1)               <---------ARR11(3)                             --------->LBD16              <---------GLK1(1)                              <---------HSFB2a(2)              --------->GLK1(1)                              <-----------RAV1(2)                <----  <------ZmHOX2a(2)   <---------TOE1(2)                    <------ZmHOX2a(2)                    -----  =============================HOX2a_HOX2a                 ==============HOX2a_HOX2a           ------ ======================HOX2a_HOX2a                        <---------ARR14(2)                   <----- ------ZmHOX2a(1)------>ZmHOX2a(2)                        --------->ARR14(2)         >>>>>>>>>GT-1 =======================HOX2a_HOX2a    <-----------GT1    --------->AGP1  <---------AHL20(2)   <----- ------HSFB2a(2)===============HOX2a_HOX2a                --------->ARR11(3)      ----------->GT1 <-- ----->HSFC1(1)----------------------->TaNAC69(2)    ----------->RAV1(1)  --------->AHL20(2)   ------ ----->HSFB2a(2)<---------GLK1(1)    <-----------GT1 ====================RAV      <---------MYB46(3)   taggatcaacaatgagagatctctcaggatacgccattttttctctatacgagtacaacagatccagaggatgaatttaaagagtggttaatacaaattt  7102900        <----------DOF2     <-----------GT1     *TSS    ---------->ID1 -----AHL20(2)                 <---------AtLEC2 ---->AHL20(2)        ----------->GT1 --->AHL20(1)  --------->LBD16 <---------ANAC58 ----AHL20(1) --------->LBD16  <---------ANAC58 ----AHL20(2)<---------HSFB2a(2)    <---------ANAC46                         --------->ZAT6 -------YAB1<---------LBD16   <-------TEIL          ----------->GT1     --------->At4g35610 --->AHL20(2)--------->HSFB2a(2)------->TEIL ---------->DOF2 <---------YAB1 <---------YAB1          -   atttttgtttcttttcccgaagagtgctaaaatgcatgtcgagtagataaagagtcgtttattttgatgaaaacagctatcactgaaaacttcacatagt  7103000                                                                                  ===================                                                                             --------------->AGL15                               <---------AHL20(2)                           =========================                       --------->LBD16               --------->ANAC58       ----------------->AGL3                       ----------->GT1       --------->YAB1                 ----------------->AGL1                      --------->ANAC46      <---------ATHB12                ----------------->AGL2          <-----------GT1     <---------AHL20(2)     --------->ANAC58--------->ANAC58            ----     ----------->GT1  --------->LBD16     --------->WOX13(1)<---------AHL20(2)    ---------->DOF2<---     <----------ID1  <---------LBD16    <---------ATHB12   --------->AHL20(2)<---------------AGL15 -------->YAB1 <----------DOF2--------->AHL20(2)     --------->ANAC46--------->ANAC58        --------   aatgaaaacgataaacccttttacccggaaaattaaatagctatcaatcaaaaccacgatataaaattcgcaagtaatgccaaaaaaaggaagagataga  7103100                            <----------DOF2                          <---------At4g35610                       <---------ZAT14                       <---------ZAT18                       --------->ZAT14                      --------->ALFIN1              =========================bZIP_DOF              --------->ANAC58              <---------O2--------->At4g35610                <---------At4g35610              --------->O2<---------ZAT2    --------------->AGL15              --------->bZIP60(1)           <---------------AGL15              --------->ANAC58             ----------------->AG =======================bZIP_DOF           ----------------->AGL2 ===========================================================MADS_MADS                            ---- ----->O2     --------->TGA1a              ----------------->AGL1                         <----------DOF2 ------O2     --------->ANAC46             <-----------------AG                           --------->TOE2(3) ->CCA1(2)    <---------TGA1a              <-----------------AGL1             <---------ZAT6---------   cgtcgaatttcgactcacgacacagtgcagctttgtgaagacttagcccaaattggaattgttagcacatatcaaaactagtctaaaaactactttaaat  7103200                                                                    --------->HSFB2a(2)                                                             <------MYB83                                                             <------MYB46(1)                                                    --------->ARR11(3)                                                    --------->AHL20(1)                     <---------                                                    <---------AHL20(1)                     <---------DAG2                                            --------->AHL20(2)      <---------HSFB2a(2) <-----------GT1 ----->AHL20(2)                           <----------DOF2   <---------MYB46(3)    --------->AHL20(2) >AHL20(2)     <-----------GT1            --------->TOE2(3)<---------ANAC46       <---------AHL20(2)   gaaatattggtgagttttcacatatcaaaactactctaaaattactttaaatgatatattggtgggttttctaaaactcgttgataaattttactttttg  7103300                                                                     <-----------GT1             <---                                                              <---------DAG2                    <----                                                     --------->ARR11(3)                         <----                                            ----------->GT1 ------->TEIL                       <-----               --------->ANAC58           ---------->DOF2  <-----------GT1                   <-------               --------->ANAC58        ----------->GT1  --------------->AtSPL8               --------               --------->ANAC46   --------->AHL20(2) <---------AHL20(1)                     --------- -DOF2<---------YAB1<-----------GT1<---------AHL20(2)--------->AHL20(1)                     <--------   tttttgttatgtttcacaagaaataccattttcatataaaatagtaaagttaaaaaatattgaaccttttttcacaataaacaaaactcaagttataatt  7103400  Previous    Next  AGI:  At1g20500.1    Description:  4-coumarate--CoA ligase family / 4-coumaroyl-CoA synthase family. Identical to 4-coumarate--CoA ligase-like 4 (4CLL4) [Arabidopsis Thaliana] (GB:P0C5B6;GB:Q9LMV7); similar to AMP-dependent synthetase and ligase family protein [Arabidopsis thaliana] (TAIR:AT1G20490.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62012.1); contains InterPro domain AMP-dependent synthetase and ligase; (InterPro:IPR000873) Range:  from: 7101474    to: 7102905    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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