Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          --------->YAB1                  --------->YAB1           <---------ARR14(2)           --------->GLK1(2)           --------->ARR14(2)  --------->AHL20(2)          --------->RVE1(1)--------->AHL20(2)        --------->AHL20(2) <---------AHL20(2)   --------->AHL20(2)   --------->AHL20(2)                                      <---------GLK1(2)  --------->AHL20(2) --------->YAB1                                          --------->HSFB2a(2) -------->TOE2(3) ----------->GT1                                            <---------HSFB2a(2) -------YAB1    <---------MYB52(1)           <-------TEIL             <-----------GT1    <----------DOF2   ttcattaaaaaaaaatccgatagtaataaaaaaataaacaaactaaattcatgtgaaaacatcgcacaaaattatccctctagaatttctacttttgagt  7091000                                                                                   --------->MYB52(1)                                                                                  ----------->HVH21                                                                                --------->ANAC55(1)                                                                                --------->ANAC55(2)                                                                                --------->ANAC58                                                                                <---------ANAC55(2)                                                                                --------->ANAC58                                                                                --------->ANAC46                                                                          <---------ANAC46                                                                          <---------ANAC58                  ---------->DOF2              --------->ANAC58          --------------->AtSPL8             ------->TEIL <-----------GT1      --------->ANAC46     <---------AHL20(2)   ------>NtERF2         --------------->AtSPL8  <---------AHL20(2)                --------->AHL20(2)   --------->DEAR3(1)         <---------------AtSPL8 --------->AHL20(2)   <---------ATHB12    --------------->AtSPL3      <---------YAB1    --------->AHL20(2)     --------->ANAC58   <---------MYB52(1)  ------->GAMYB      --------->ICU4<---------ATHB12    <------ZmHOX2a(2)------>ZmHOX2a(2)<---------ANAC58      -----   agaatgagataattgtaccccaaagattaaacaattttatagatcaaacacacaaatgatccaactccattaattttcgtacacgtaacggcgactatcc  7091100                                          <---------PCF2                                --------->ARR14(3)               --------->ARR11(3)         <---------PCF5               --------->AHL20(1) ------>ZmHOX2a(2)               <---------AHL20(1)<------ZmHOX2a(2)             --------->AHL20(1) <---------ARR14(3)                                                ---             <---------ARR11(3) --------->ARR11(3)                                                ---  --------->ANAC46              <---------ARR14(2)                                              <----  --------->ANAC58              <---------ARR11(3)              --------->ZAT14           --------->ARR14(2)  --------->ANAC58              --------->ARR14(2)          <---------ICU4                <---------ARR14(2) ---->TOE2(3)<---------AHL20(1) <---------AGP1    ----------->GT1--------->ZAT6  --------->HSFB2a(2)<   ataaacgaaactcaaaatattttgtttagtttaagatctcgacgggcccaatgtgtaatacatcattacactaacatgggcttctaaaatcgaatcgggt  7091200          ----------->GT1         ----------->GT1                                                     <----------DOF2     --------->LBD16                                                       ------->TEIL   <---------LBD16       --------->LBD16                                <---------MYB52(2)  --------->MYB52(1)    <---------LBD16                               --------->MYB52(1) <---------ARR14(2)  --------->ARR14(2)                             --------->DOF5.7(2) --------->ARR14(2)  <---------ARR14(2)                           --------->ANAC58 ------>ANAC58     --------->ANAC46                               --------->ANAC58 ------>ANAC58 <-----------GT1  ----------->HVH21                 --------->ANAC46      ----------->GT1 ----P ---------->DOF2 <---------LBD16                  <------ZmHOX2a(1)------->GAMYB------->TEIL ------ZmHOX2a(1)  ----------->HVH21                 <------ZmHOX2a(1)<---------DOF5.7(2)     <------   aaggaaccggaaagttaaaacccgacccgggaatttgacaccgagacagagggaaggaggaagagtctacgctaacgaactttagacgaatcgaaacatt  7091300                                                                          --------->LBD16                                                                         --------->LBD16                                                                        --------->HSFB2a(2)                                                   <-------TEIL         <---------HSFB2a(2)                                          <---------MYB52(1)         <---------ARR14(2)       <------ <---------ANAC58           --------->LBD16<---------MYB46(3)       ------>ZmHOX2a(1)         <------ <---------ANAC58     ------->TEIL       <-------GAMYB          --------->ARR14(2)            <------ ------CBF   <---------AHL20(2)     <-----------GT1*TSS         <---------ARR14(2)         XXXXXXXXXX   gtttcgtctctgaatttttttttgaatctccagagttgtttcccgttgttagattcatcgatttcgaatcctatcccgaagaattgttcttcaatctcgt  7091400                 --------->LBD16        ------>NtERF2       <---------DEAR3(1)     <---------ATERF1(1)     ------>NtERF2 --------->ARR14(2)    ----------->HVH21        --------->ETT(2)             ----------->GT1                    --------    --------->DEAR3(1)       <---------ZAT14              <---------MYB46(3)         ---------->DOF2 ---ANAC58     <---------LBD16                          <-------GAMYB               ================= ---ANAC58 <----------DOF2   --------->ZAT14  --------->ARR14(2)                    <------ZmHOX2a(1) ---ANAC46<---------GLK1(2)  <---------ETT(2) <---------ARR14(2)        --------->GLK1(2)   <-------- XXXXXXXXXX>MIR870 <---------ARR14(2)        <------ZmHOX2a(1)         <---------GLK1(2)<------------   gtttctccgacggcttctccggatatatcagtcgactgagaagagaaggatttgtttcggttgtgaaatcggagaatcgctgcataggaaagcgatgata  7091500                    --------->ZAT2       --------->GLK1(2)       <---------ARR11(1)             <-------TEIL       --------->ARR14(2)            --------->ARR14(1)       <---------ARR14(2)           <---------ARR14(2)      <---------At4g35610<---------ETT(2)   <------ZmHOX2a(2)--------->At4g35610            --------->ATHB12            --------->ETT(2)  <---------ARR11(3)<---------ZAT2  --------->ARR14(2)      --------->At4g35610--------->DEAR3(1) ->YAB1------->TEIL <---------At4g35610           --------->ICU4               --------->WRKY38(1) =========HOX2a_HOX2a               <---------GLK1(2)<---------WOX13(1)        --------->WRKY12 -YAB1<---------ARR14(1)     ---------->TaMYB80   <---------YAB1    --------------------->WRI1  <<<<< ---------WRI1      ----------->RAV1(2)         --------->YAB1      <----------DOF2         <--------   acaagatcgaatctagcagagcagctgagggaatatcagattcgatctaagcatgattgggcttctgtctctttcttctcgtcgacctcgaatttttctt  7091600                                     ------>ZmHOX2a(2)                   <---------DAG2   <------ZmHOX2a(2)             --------->ATHB12      --------->AGP1            <-------TEIL   --------->ATHB12                                                --------->At4g35610          <---------ARR14(2)       <---------ARR11(3)                                      <---------At4g35610          --------->ARR14(2)    <---------HSFB2a(2)                                     ---------->DOF2         ==================================HOX2a_HOX2a                             <---------At5g28300 <---------HSFB2a(2)    <-----------GT1                                           <-----------GT1 --------->HSFB2a(2)<----------DOF2--------->ARR11(3)                        <-------GAMYB<---------AGP1 <<<<TBF1===================================HOX2a_HOX2a                     --------->MYB52(2) ---GT1  <------ZmHOX2a(1)<---------YAB1   ------->TEIL                     <---------MYB46(3)   cttctaggtgaggattcattgcctttttatgattcgagatctatgcatttttggttctccaatttgtgtttgtgtagtttgttgttaccgtagagctgtg  7091700                                                                                                <----                                                                                             ========                                                       <---------O2                          ------>ZmHOX2a(2)                                                       --------->ANAC55(2)                  ---------                                                       <---------ANAC58                     <------ZmHOX2a(2)                                                       <---------ANAC55(2)                  =========                                                       <---------ANAC46                     ---------                                                       ----------->GT1                     <---------ARR11(3)                                                       <---------ANAC55(1)                 --------->ARR14(2)                                                       <---------ANAC58                    --------->ARR11(3)                                                   <-------GAMYB                           <---------ARR14(2)                                        --------->GLK1(2)                                  <---------ARR14(3)                                        --------->ARR14(2)                                 <---------AGP1                              --------->ATHB12    <------MYB46(1)                          --------->AGP1                             <---------YAB1       <---------MYB46(3)                      <---------GLK1(1)                             --------->ICU4       <------MYB83                  <---------TOE1(3)                           <---------ICU4       <--------P                      <---------TOE2(3)----        <---------ARR11(3) --------->YAB1      ------------>MYB.PH3(2)<-------MYC3        --------->GLK1(1)     <---------TOE1(2)    --------->ICU4<---------ARR14(2)            ------->MYC3 --------->ALFIN1--   tttttcgctggatattagctctggttgaataatgatttagagaatttggagttggttacgtgaatttgaacatgtggaagttagggtttgggagatctga  7091800       <---------GLK1(2) -----GLK1(2) ====================HOX2a_HOX2a                                        <---------ARR11(3) >CCA1(2)                          <---------ANAC46             <---------HSFB2a(1) ====================HOX2a_HOX2a   <---------ANAC58           ----------->RAV1(1)           --------- >At4g35610                        ----------->GT1         --------->ANAC58             --------->ARR14(2) --->TEIL     ------>ZmHOX2a(1)    <---------ANAC58        --------->ANAC58     <----------DOF2 ------->TOE2(3)     ----------->GT1        <---------YAB1 --------->ANAC46 <---------CCA1(2)   atctcaatagaaactcctaaaatttgttaattcagagtcgtgaattctgatttagagaattaagcaacattcgatatcatctctttgttaaatctgctcg  7091900  Previous    Next  AGI:  At1g20460.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G76185.1); similar to unknown [Brassica juncea] (GB:ABO71663.1) Range:  from: 7091351    to: 7092983    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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