Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             <---------ANAC58                           <---------ANAC58                           <---------ANAC46                    --------->AHL20(2)                    <---------AHL20(2)                    <---------AHL20(1)                    --------->AHL20(1)                <---------AHL20(2)                --------->AHL20(2)               <---------AHL20(2)            --------->AHL20(2)           --------->AHL20(2)                                                 --------->TOE2(3)           <---------AHL20(2)         ------->TEIL                            --------->TOE1(3)<----- ----------DOF2--------->AHL20(2) <---------TOE2(3)                 >>>>>>>>>>GT-3b          xxxxxxxx -YAB1   <----------DOF2 --------->ARR11(3)    ----------->GT1   <---------TOE2(3)           <-------   ggctttaatctctttaaattaataaaatgtcttgttaatgaatttagtttagtaaaattttagatttaagaaaaataaaactttaaactctaagactttg  7076800                                                                                         <---------AHL20(2)                                                                                        <---------AHL20(2)                                                                                        --------->AHL20(2)                                                                                     <---------AHL20(2)       <---------AHL20(2)                                                           --------->AHL20(2)       --------->AHL20(1)                                                       --------->AHL20(2)       --------->AHL20(2)                                                       <---------AHL20(2) ----YAB1   --------->YAB1             --------->ALFIN1     ----------->GT1    <---------WOX13(1) xxxxxxxxxxxxxxx>smallRNA(si3) <---------TOE2(3)          ---------->DOF2   <---------YAB1 ---DOF2   --------->AHL20(2)<---------AHL20(2) <----------DOF2      <----------DOF2<---------AHL20(2)   attacaaaataaaataaaaatcgaaaactttttaatgtaaggtgtttgaactttgaatacaaaagaaaaaactttgttttgattaattaaataaatgagt  7076900                                                       --------->ATHB12                                                      <---------YAB1                                                   <---------AHL20(2)                                                  <---------AHL20(2)         --------->TOE2(3)                                                  --------->AHL20(2)       --------->ARR11(3)                                                  --------->AHL20(1)       <---------ARR11(3)                         <---------MYB46(3)    <---------AHL20(2)   --------->ANAC58                        <---------YAB1       <---------AHL20(2)     ----------->GT1               <---------TOE2(3)             --------->AHL20(2)     --------->ANAC58           ------               <---------YAB1    <---------HSFB2a(1) <---------TOE2(3)     --------->GLK1(2)  <------ <----------DOF2        <---------TOE2(3)--------->AHL20(2)       <---------AtLEC2            -------   tagctttgctattcattaagataactatggttgaaatgttcgattatataaatttaatgaatggttttgcaagtaaaaatctaaatagagctatatttaa  7077000                                                                                                    -                                                                                               ------                                                                                               <-----                                                                                              -------                                                                                              <------                                                                                           <---------YAB1                                                                                           <---------AHL20(2)    <------------------------ANAC81                                                     --------->ARR11(3)   <---------AHL20(2)                                                                   <---------ARR11(3)   --------->AHL20(2)                                                                   --------->AHL20(1)   <---------YAB1---------->ID1                                --------->HSFB2a(2)      <---------AHL20(1)  <---------AHL20(1)                                --------->AHL20(2)                  <---------AHL20(2)  --------->AHL20(1)                               --------->AHL20(2)                   --------->AHL20(2)  --------->AHL20(2)<----------DOF2             --------->AHL20(2)                 <---------AHL20(2) ---->DOF2 ---------->ID1                      --------->AHL20(2)           --------->YAB1 --------->AHL20(2) ---AHL20(2)     <-----------GT1               <---------AHL20(2) ---------->DOF2  --------->AHL20(2) -->AHL20(2)    <-----------GT1            --------->AHL20(2)  <---------HSFB2a(2)--------->YAB1 <---   agaatataattttgtttttttcctttttttcttacaaaatgcttataaaataaataaaaaatgttctataaagtttaagcataattttaatatattatta  7077100                                                                                                  ---                                                                                                <----                                                                                               <-----                                                                                               <-----                                                                                              <------NtERF2                                                                                              -------                                                                                             ------>NtERF2                                                                                             <-------                                                                                             <-------                                                                                             <-------       <---------ATHB51                                                                      <-------   ------------>CBF                                                       <---------SPL7    <-------- -------->At4g35610                                                    <-----------HVH21    <-------- --->YAB1                                                       <---------ANAC58            <-------- ----ICU4           --------->CCA1(2)                      <---------AtLEC2                 <-------- -->ICU4--------->AHL20(2)           <---------AHL20(2)  *TSS   <---------ANAC58         --------->MYB46(2) ---YAB1--------->YAB1   <------ZmHOX2a(1)        <---------ZAT18 <---------ARR14(2) <---------ZAT6 ------YAB1    ---------->DOF2 <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<---------SPL7     <---------YAB1---   ttatctgcaattatacaaaaagatagaggacataaatgttttatttgcatagggcattcttacatggcgaaccggtcgtatgacttattgttaggcggcg  7077200     <---------ALFIN1     --------->ANAC46  ------>ZmHOX2a(2) ------>WRKY12 ---GAMYB ----DEAR3(1) ----ANAC46 -->ATERF1(1)                                                        xxxxxxxxxxxxxxxxxxxx>smallRNA(si3) --ERF1                                                             <---------YAB1           <------- --RAP2.3(1)                                                      <---------ICU4           <--------- --ORA47(2)                                                       <--------HAHB4        <---------ARR11(3) --DEAR4(2)                                                      --------->ICU4         <---------ARR14(2) -DEAR3(1)                                                     --------->YAB1           --------->ARR11(3) -RAP2.3(3)                                                  <-----------GT1           --------->RVE1(1) -RAP2.3(2)               <---------MYB59              <---------TOE2(2)      --------->ARR11(3) -RAP2.6(2)              --------->ANAC46              <---------TOE1(2)      <---------ARR11(3) ------>WRKY38(1)      <-----------GT1         --------->MYB52(2)<---------YAB1  <----------DOF2    <   ttgatccacacatcggctctgaattttacccaattgacttcttggaggtttgtttcatatgtttttcattattattcaaacatctttgaatatctttatt  7077300                                                                      <---------At4g35610                                                                      --------->ATERF1(1)                                                                      <------NtERF2                                                                      --------->At4g35610                                                                     <---------ERF1                                                                     <---------ORA47(2)                                                                     <<<<<<<<<AtERF-3                                                                     <---------RAP2.3(1)                                                                     ------>NtERF2                                                                     <<<<<<<<<AtERF-4                                                                    <---------bZIP60(1)                                                                    <---------RAP2.3(3)                                                                    <---------ATERF1(2)                                                                    <---------RAP2.3(2)                                                                    --------->bZIP60(1)                                                                    --------->ATERF1(2)                                                                    <---------DEAR3(1)                                                                    <---------RAP2.6(2)                                                                   <------NtERF2                                                                 --------->ALFIN1                                                               --------->O2                                                    <----------DOF2--------->RAP2.6(3)                                                --------->ZAT14<---------ANAC58          <---------PCF2                        <---------ZAT14<---------O2   <---------YAB1          <---------ZAT14 --------->ZAT18     <---------bZIP60(2)               <--- --------->YAB1          <---------WOX13(1)--------->ZAT14     <---------ANAC55(2)        xxxxxxxxxxx --AHL20(2)  ------>ZmHOX2a(2)             <---------ZAT14     <---------ANAC46       --------->ALFIN1 -DOF2   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->ANAC46 <---------ANAC58       <---------ZAT6 ---------YAB1         --------->ATHB12   xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   ---------->DOF2   <---   tgatcataagtgggatcgcgttgtttgattgcagagcaatatgactccactgaactttgccaactacgtggcggcacacagaaaagaagtgttcgaattg  7077400                                                                                                <----                                          --------------->AtSPL8                                <----         --------->TOE2(3)               <---------ANAC46                                  --------->ARR14(2)    <---------MYB52(1)    <---------HSFC1(2)                                   --------->ARR14(2)   <----------DOF2        <---------HSFB2a(1)                                  <---------ARR11(3) ------ANAC58             --------->HSFC1(2)    <----------DOF2                <---------ARR14(2)<--- xxxxxxxxx>smallRNA(si3)  --------->HSFB2a(1)   <---------DAG2           -------->P------>ZmHOX2a(1) ------ANAC58             --------->At4g35610<-----------GT1          <---------MYB52(2)   <---------ARR14(2)   tttgcctttagccttatagtcgcagagaagcttccaagtacttgtttgtactttattttggtgaatgtagccactaaccagtatcctcgtgaatatttgc  7077500                                      ----------->GT1                             -------->ATHB1                             --------->AHL20(2)                             <---------AHL20(2)                             --------->ATHB12                                  --------->ARR11(3)    <---------AHL20(2)       <--------HAHB4            --------->MYB52(1)      --------->AHL20(1)   --------->AHL20(2)        --------->ATHB51        --------->MYB46(3)        <---------AHL20(1) --------------->AGL15       <---------ICU4          <---------MYB52(2)        <---------ARR11(3) -----ANAC58                --------->ICU4     --------->CCA1(2)          ----------->GT1           < -----ANAC58                <---------ATHB12  --------->AHL20(1)   --------->TOE2(3)         <------- -------DOF2  <---------ZAT6<---------ATHB51 --------->AHL20(2)    --------->TOE1(3)         --------   tttcatttaatagtcagtgttcgtttttcaattatttgtattgtaaaatatatgaactaacgcttaaaactttaaactgaaaatatttgagttaatatct  7077600                                                 --------->ATHB12                                                <---------AHL20(2)                                                <---------YAB1                                               <---------AHL20(2)                                               --------->AHL20(2)                                               <---------AHL20(1)                                               --------->AHL20(1)                                            --------->AHL20(2)                                           <---------AHL20(2)   ------->GAMYB                       <---------YAB1                                      --------->LBD16  <------------MYB.PH3(1)            --------->YAB1                        --------->ARR14(2) <---------At5g28300                 ----------->GT1                       <---------ARR14(2)    <--- -----------GT1    <----------DOF2  ----------->GT1                 ---------->DOF2      ----------->RAV1(2) --ARR11(3)<----------DOF2          <---------YAB1           <---------At4g35610  --------->AHL20(2) ->ARR11(3)<---------DAG2       --------->AHL20(2)      <------ZmHOX2a(2)----------->ARR10<---------LBD16   attaaccgtcttacttttcttctttgttacaaaaaaaaatgataaataatataattggatcacatctgatcaaagtagatactaaaaaataccctggaac  7077700  Previous    Next  AGI:  At1g20405.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G20680.1) Range:  from: 7077157    to: 7077596    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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