Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          --------->SPL7                                                                                        ------->TEIL                                                                                      <---------ZAT18                                                                                      <---------SPL7                                                                                     --------->ANAC55(2)                                                                                     <---------ANAC58                                                                                     <---------ANAC58                                                                                 <xxxxxxxxxxxxxxxxxxx                                                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                           --------->GLK1(1)                                                                           <---------GLK1(1)       --                                                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)        --------->At4g35610                                          <---------LBD16xxxxxxxxxxxxxxxxx        <---------ZAT2                                               xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)        <---------At4g35610                                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)        --------->ZAT2                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      <-----------RAV1(2)                                      <---------ZAT18<xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   <------NtERF2                                         --------->DAG2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   --------->ATERF1(1)                                  --------->DAG2 --------->HSFB2a(2)      <----  <---------ATERF1(1)                            <---------ANAC46  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  ------>NtERF2<------NtERF2                     <---------ANAC58  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <---------RAP2.6(2)                            <-----------------------TaNAC69(2)  xxxxxxxxxxxxxxxxx --------->RAP2.6(2)                         --------->At4g35610  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <---------ATERF1(2)             <------ZmHOX2a(1)     ---------->DOF2<---------LBD16<---------ANAC46 --------->DEAR3(1)           <-----------RAV1(2)<---------ANAC58 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) --------->ATERF1(2)        <-----------HVH21<---------ZAT2    <------NtERF2----------------------->TaNAC69(2) -------->RAP2.6(3)    <---------ZAT2        <---------At4g35610  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) -------->DEAR3(2)xxxxxxxxxxxxxxxx>smallRNA(i)  <-------TEIL <---------DEAR3(1) xxxxxxxxxxxxxxxxxxxxx -------->ATERF1(1)    --------->ZAT2        --------->ZAT2--------->ALFIN1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) ------->ZAT2  <---------ATERF1(1)         <-----------RAV1(2) --------->ZAT18<-----------GT1<-------   gagccggcccagcaggccgaagcccagcctggtcaggatgtgagttcagctgcgtagaaaaggggggcactctcgggaattcaccttgcgtaccctacta  7075400                                                                                       --------->LBD16                                                                                      --------->ANAC58                                                                                      --------->LBD16                                                                                      --------->ANAC46                                                                                      --------->ANAC58                                                                                      --------->HSFB2a(2)                                                                                      <---------HSFB2a(2)                                                                                     <---------LBD16                                                                                  --------->ANAC58                                                                               --------->ZAT2     ----------->GT1                                                       <-----------HVH21    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                 ===========================bZIP_DOF   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                   --------->ANAC58   <---------ANAC46                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      ---- xxxxsmallRNA(si3)                                --------->HSFB2a(2)     --------->ANAC46       ---- ------->ANAC46                            xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  <---------At4g35610 xxxxxx>smallRNA(si3)         <---------LBD16     <---------HSFB2a(2)     --------->TGA1a        <--- -----ZAT14    <---------TOE2(3)--------->LBD16  <---------LBD16          --------->ANAC58---------->DOF2 xx>smallRNA(le3)            <---------LBD16    <---------LBD16  <------ZmHOX2a(1)--------->ANAC58 xx>smallRNA(le3)      ---------->DOF2    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<---------ZAT2    <--- -----------SPL14<------ZmHOX2a(1)        xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  --------->At4g35610  x   tacggacgggtataaataaggaatagaaagtctcgggagaagggacgtttttcgggacctggagaaaggatagcacaagtcagctcgcccggaagagcca  7075500                                                                                                    <                                                           --------->HSFB2a(2)                 ------                                                           <---------HSFB2a(2)                 ------               --------->ZAT2                              <-----------RAV1(2)         <---------ZAT2               --------->At4g35610                     --------->ANAC58              --------->MYB46(3)               <---------At4g35610                     --------->ANAC58            --------->MYB52(1)          --------->ANAC46                          --------->At4g35610           --------->AtMYB61 -          --------->ANAC58                   <------ZmHOX2a(2)                   --------->MYB46(3)<-          --------->ANAC58                  --------->ARR11(3)        --------->ZAT2 <---------ALFIN1   <xxxxxxxxxxxxxxxxsmallRNA(s)             <---------ARR14(2)        --------->At4g35610     -------   <xxxxxxxxxxxxxxxxsmallRNA(i)             <---------ARR11(3)        <---------ZAT2<xxxxxxxxxxxxxxxx ----->ZAT2    <---------ZAT2       xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) <---------ZAT18--------->At4g35610 ----->At4g35610       <xxxxxxxxxxxxxxxxsmallRNA(s) <---------At4g35610 --------->ZAT14--------->ZAT2 ------ZAT2<-----------HVH21     <---------ZAT2     --------->ZAT2    --------->bZIP60(2)    -------- ------At4g35610     --------->ETT(2)       --------->ARR14(2) ---------->DOF2 <<<<<<<ZML2--------->ANAC58 xxxxxxxxxxxxxxx>smallRNA(i)     <---------At4g35610<---------ZAT2    <---------At4g35610 --------->ANAC58   gctcatcgatacaagtcagctcgtcgagagaagtctgctcgtcgaagatcagccagctcgcccagaagagccagctcactagaaccaccagctcgaaacg  7075600 --------->DEAR3(1) ------NtERF2                                                                 --------->ZAT2 --->ANAC58                                                                   --------->At4g35610 --->ANAC58 --------->ZAT18                                                   <---------ZAT2 -------->ATERF1(1)                           <-----------HVH21   <---------At4g35610 --------ATERF1(1)                           <----------DOF2      <---------ZAT2  <-------PIF5 -->RAP2.6(3) --------->RAP2.3(3) --------->ANAC58                --------->At4g35610 xxxxxxxsmallRNA(s2)              --------->ANAC58                --------->ZAT2  ------->PIF5<------ ->MYB52(1) <---------ZAT18      <---------ZAT18      <-----------HVH21       <---------At4g35610<---   gcatcgcctcgtagcgccctcaactacgctctcagttcgcaataagcctttcagcccgtcgattgcccagcttcaagttcagctcgtggattagagattg  7075700                                                                                         <---------ANAC46                                                                                        <---------LBD16                                                                                       --------->ALFIN1                                                                                    --------->ANAC46                                                                                  --------->MYB52(1)           <---------LBD16                                                       ----------->HVH21           --------->LBD16             <---------ANAC58      --------->ANAC46   ------>ZmHOX2a(2)        ------>MYB46(1)                <---------ANAC58   --------->ZAT14      --------->bZIP60(1)        ------>MYB83              <---------AHL20(2)     <-----------HVH21     <---------At4g35610     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)       --------->ZAT6                --------->At4g35610   <-----------GT1      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<---------ALFIN1  <---------bZIP60(1) ---WOX13(1) --------->LBD16      --------->AHL20(2)--------->MYB52(1)        <---------ARR11(3) ------GLK1(2)         --------------->AtSPL3    --------->ANAC46             --------->ARR11(3)   attcttcaccttccccagagactcacccgtacttgtttaattcgtgcattaacacaaccgttcacacctccttgagaagtgatctcacggtgcggatgaa  7075800                                                                           ------->TEIL                                                                        --------->ANAC58                                                                        --------->ANAC58                                                                        --------->ANAC46         <---                           <---------ANAC58                            ------>MYB83           <------               <---------ALFIN1                                        ------>MYB46(1)        -------              --------->ZAT14                                     >>>>>>>>>>WRKY43            <------              --------->ZAT18                                     >>>>>>>>>>WRKY38           <-------GAMYB              <---------ZAT18                                     >>>>>>>>>>WRKY26          <--------              <---------ZAT14                                  --------->At4g35610         <---------ANAC46      <---------ANAC58     <---------ANAC58                  <-----------RAV1(2)       <---------At5g28300      <---------ANAC58    <---------MYB46(3)         <---------REM1(1)--------->MYB52(1)  <---------LBD16      <---------ANAC46  <---------MYB52(1)         <------------CBF  --------->AtMYB61<-----------GT1  <---------MYB52(1)  --------->ATHB12          --------->YAB1 <---------At4g35610   <---------AHL20(2)   acccgtttacttggaccgcactctccattggttgagaaacgatgggagcatcatattgtagcttcagatgaccaacgcatcccctatttaactgcggtta  7075900                                                                          <-------TEIL                                                                       --------->HSFB2a(1)                                                                       <---------HSFB2a(1)                  --------->ANAC58                                     <---------HSFC1(2)      <---------WOX13(1)                                               --------->KAN4(1)     <------------CBF--------->ZAT14             <-----------HVH21     <---------KAN4(1)    --------->ATHB12 <---------ZAT14     <---------AHL20(2)            --------->HSFC1(2)          <- ------YAB1       --------->ANAC58      --------------->AGL15         <---------KAN4(2)  <---------DAG2 ---MYB52(1)    ------->GAMYB           <---------------AGL15       <------ZmHOX2a(1)   <---------ANAC58 -->ARR14(2)  --------->ANAC58         <-----------------AGL3<---------WOX13(1)         <---------ANAC58 ---ARR14(2)  --------->ANAC46         --------->ANAC55(2)--------->ICU4--------->KAN4(2)<----------DOF2 -MYB46(3)    --------->ANAC58     <----------DOF2        ------>ZmHOX2a(1)--------->MYB52(2) <------   tgagactcattgatacaaccaagtaaactgtctcatgctttacttaatttgggtcatgtcctgatttacaggaatgttcgtttccaacttgcttttctaa  7076000                                                                                                 <---                                                    <---------AHL20(2)            --------->ARR11(3)                                      --------->bZIP60(2)              <---------At4g35610    -------    <----------DOF2     <---------DAG2--------->ANAC46        ----------------->AGL3         <-------    <---------DAG2      <----------DOF2           --------->ANAC55(2)  --------->At4g35610<---------WRKY38(1) ----------GT1         <---------ANAC58<-----------TGA1       ----------------->AGL2     ------------ ---YAB1 --------->YAB1<---------ANAC58<-----------HVH21------------>CBF          <---------ARR11(3)   ttagccctttatcaaaaaaaaacttgcttttctaatttcaacgtcatggtttatgtaattcaattccaaaatcagctctaagaagctcttagtcaatgat  7076100                                                                                   ------->GAMYB ----TEIL                                                                         --------->MYB46(3) -->YAB1                                   --------->CCA1(2)                     -------->P --ATHB12                                 --------->ARR11(3)    ----------->GT1 --------->WOX13(1) >CBF            ----------->TBP          <---------ARR11(3)    <---------ZAT6<---------ATHB12   ----   acatcagtatcaaaaacatatatatggaagttgaatgtaatggagatataactcaagtagaaactggtgttaaacggctaatcaaccaaaaactgagaat  7076200                                                                                           <---------                                                                                         <---------At4g35610                                                                                         --------->At4g35610                                                                                <---------ANAC58                                                                       ----------->HVH21 --------->ZAT14                                                                       <---------YAB1    --------->ZAT2                                                            <---------ANAC58    <---------ANAC58                                                            <---------ANAC58    <---------ANAC46                                                         <---------WOX13(1)   <-----------HVH21   ----------->GT1           ---------->DOF2 <---------HSFB2a(2)     --------->At4g35610 <---------ZAT2 ----->YAB1           ---------->DOF2        --------->HSFB2a(2)     <---------At4g35610 <---------ZAT14   gaaaatggaaaaatagataacattcaaagcggaaagaatgaaatgttctataactgtagattgctggagtcatatgactgtgtcgtctcactgctgtggc  7076300  Previous    Next  AGI:  At1g20400.1    Description:  myosin heavy chain-related. similar to myosin heavy chain-related [Arabidopsis thaliana] (TAIR:AT2G15420.1); similar to hypothetical protein 26.t00052 [Brassica oleracea] (GB:ABD65035.1); contains InterPro domain Protein of unknown function DUF1204 (InterPro:IPR009596) Range:  from: 7072182    to: 7075828    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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