Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           ------>NtERF2        --------->ANAC58        --------->ANAC46        --------->bZIP60(1)        --------->bZIP60(2)        --------->ANAC58     <---------DEAR3(1)     --------->DEAR3(1)   <-----------HVH21<------ZmHOX2a(2)  =====================bZIP_bZIP  --------->TGA1a   <---------GLK1(1)  <---------TGA1a   --------->GLK1(1)  --------->O2     --------->ARR11(3)  <---------O2     <---------ARR11(3)  --------->bZIP60(2)------>ZmHOX2a(2) ---------ALFIN1   <---------ARR14(2) ----------------->TaNAC69(2)                        <---------ARR14(2) -ARR14(3)         --------->ARR14(2)                --------->ARR14(2) >ARR14(3)   <---------TGA1a                        <---------GLK1(1) >AGP1<---------ATERF1(1)                           --------->GLK1(1) -ARR14(2)   <---------O2                     <---------ANAC58 >ARR14(2)   --------->TGA1a                  <---------ANAC46                                   <xxx >ARR11(3)   --------->O2                     <---------ANAC58                          <---------MYB52(1) -ARR11(3) <---------ALFIN1                   <-----------RAV1(1)                      <----------DOF2   ggccacgtcgacgccacttgggatctcgtcttcatcgaagacaacattgtgtgggtatccagcgttgttcttgaacacaatcttctctcctttagctata  7043000                                                                             --------->ANAC58      --                                                                             --------->ANAC58   -----                                                                           ---------->DOF2     ------                                                                        ------>NtERF2          ------                                                                       --------->LBD16         ------                                                                       ------>NtERF2          -------                            <---------ALFIN1                          <---------RAP2.6(2)    <-------                           --------->MYB46(3)                        <---------LBD16         --------                     --------->MYB52(1)                            <---------ARR14(2)        ------>NtERF2                     <---------DOF5.7(2)                        <---------ANAC58          --------->At4g35610               ---------->DOF2                 --------->ARR11(3)  --------->ARR14(2)     <---------At4g35610      <---------MYB52(1)------->GAMYB ------>ZmHOX2a(1)         <---------ANAC46       --------->At4g35610    <---------MYB46(3) --------->MYB46(3)      <---------ARR11(3)<----------DOF2       <---------At4g35610 xxxxxxxxxxxxxxxxxsmallRNA(s2)    <---------ALFIN1              <---------ANAC58    <xxxxxxxxxxxxxxxxsmallRNA(s)   gagaagtcgttgggaataaaagctaacgacccatcccctcctcccaagagaacttctattgccatggcgtttccggccaaagcaattgaagctgcagccg  7043100                                                                                      <-------GAMYB                                                                                      <------NtERF2                                                                                      <---------At4g35610                                                                                     <---------MYB46(3)       <---------ATERF1(1)                                                          <---------ANAC58       ------>NtERF2                                                                <---------RAP2.6(2)      ----------->HVH21                                                             <---------ANAC58     ------>NtERF2                                                                  <---------ANAC46     --------->LBD16                                                               <------NtERF2     <------NtERF2                                                                 --------->ATERF1(1)    <---------ATERF1(1)                   --------->HSFC1(2)                       <---------LBD16    --------->RAP2.6(2)                   <---------At4g35610                     <---------MYB46(3)   <---------DEAR3(1)            --------->ZAT14           <---------At4g35610<---------DEAR3(1) ------->SPL7                    --------->ZAT18           --------->At4g35610<---------DREB2C(2) ---->At4g35610                  <---------ZAT14          ------->GAMYB<---------GLK1(2) --->RAP2.6(2)                 --------->bZIP60(1)       --------->MYB46(3)----------->TGA1 --->ANAC46               <---------At4g35610 <---------DEAR3(1)       <---------ARR14(2)--------->ATHB12 --->RAP2.3(2)      <----------DOF2       --------->At4g35610 --------->At4g35610 ------>NtERF2   <-- -->RAP2.3(1)    --------->ARR11(3)       <---------HSFC1(2)  <---------At4g35610--------->ALFIN1<--- --At4g35610     <---------ARR11(3)--------------------->WRI1----------->RAV1(1) <---------DEAR3(1) ->At4g35610 --------->LBD16   <---------bZIP60(1)     ----------->RAV1(1) ----------->HVH21    <----   ctacggccgcgactccgaagttctttagagatgacttcactgtaagcttcggtgatgcaacagcagcagtttggattctgacggtggcggatgatttgat  7043200                                               <---------ARR14(2)                                            <---------TOE2(3)                      --------->YAB1                                            <---------TOE1(3)                     <---------ZAT6                                         <---------ANAC46              <----------DOF2                                        <------NtERF2              --------->ARR11(3)                                        --------->At4g35610        --------->ARR14(2)     --------->CCA1(2)                 ----------->HVH21      <---------At4g35610        <---------ARR14(2)    --------->ARR11(1)         ---------->DOF2               <---------MYB46(3)          <---------ARR11(3)    --------->ARR11(3)      <----------DOF2                  --------->MYB55(2)          <---------GLK1(2)     <---------ARR14(2)  <---------TOE2(3)---------->DOF2     ------>NtERF2             <---------YAB1 ----------->GT1 -----GAMYB   <---------DEAR3(1)      --------->ALFIN1      --------->YAB1    --------->ZAT14 ------MYB46(3)--------->At4g35610    <---------DEAR3(1)   --------->ICU4     <---------ZAT14    <--- -----YAB1   <---------ORA47(1)     ------->GAMYB      ------>NtERF2--------->GLK1(2)  ----------->ARR10   ggttgaggctttaaggccggtgaaagatgggattgcaacggtggctgaggttactgaggccatgatgaagattcttttagagtagtgataagatttgggt  7043300                                                             --------->DAG2                                                     *TSS   ---------->DOF2                   <---------MYB46(3)               ---------->DOF2        <---------ANAC46                        ----------->GT1       ---------->ID1                           <---------ANAC46         ------------>CBF  --------->ANAC58 <---------TOE2(3)<---------AtMYB61            --------->ALFIN1         <------ZmHOX2a(1)  --------->ANAC58 -------DOF2    <----------DOF2              <-----------RAV1(1)     --------->CCA1(2)   ---------->DOF2   tttaagtttttcgtttagctttggttcgatcgagtttatgagtttttatgtggtgaaagagagaaagtgagataggacaatggatggctctaaaagcaaa  7043400                                                                 <---------bZIP60(2)                                                                 <---------TGA1a                                                                 <---------O2                                                              ----------->HVH21                                                            ----------->GT1                                                            <---------O2                                                            <---------bZIP60(1)                                                            --------->bZIP60(1)                                         =============================MYC_MYB                                         <--------P         --------->TGA1a                                         ==================================MYC_MYB                                         <---------WOX13(1) --------->O2                                       <---------MYB46(3)   <---------TGA1a                                       <------MYB46(1)      <---------ANAC46                                       <------MYB83         <---------ANAC58         <------ZmHOX2a(1)                                    <------------CBF        <---------bZIP60(2)    <---------ANAC46                                   --------->ATHB12--------->ARR11(3)           --------->ALFIN1                                  <---------YAB1   <---------GLK1(2)    --------->ICU4                      ================================================bZIP_DOF<---------ANAC46    ---                      ---------->DOF2<---------WOX13(1)     <---------ANAC58  <---------bZIP60(2) <--   ctccataaaaaaacaagttatctataaagacgcgttgtgattggttgattttagatactgtgtcgtgacatggcattatgaggtggaggatgtttgtcca  7043500                                 <---------ANAC58                            --------->ANAC55(2)                            <---------ANAC46                            <---------ANAC55(2)                            <---------bZIP60(1)                            <---------ANAC58                            --------->TGA1a                            <---------ANAC58                            --------->bZIP60(1)                            <---------TGA1a                            =========================================bZIP_DOF                            <---------O2                            <---------bZIP60(2)                           ----------->STF1                  <-------TEIL   <---------ANAC58                 --------->ARR11(3)              --------->DAG2--------->O2                                                            -              <---------TOE1(3)  <---------ANAC46                                           <--------              <---------TOE2(3) <------NtERF2                 <---------ANAC46             --------->WRKY12       ---------->DOF2   ----------->HVH21                    <---------ANAC58             --------->WRKY38(1)       ===============================bZIP_DOF                <---------ANAC58             --------->WRKY45  --------->AHL20(2)     ----------->TGA1                  --------->DAG2                  ---------- ---->MYC3  --------->CCA1(2) --------->ALFIN1            ---------->DOF2                <----------DOF2 -----MYC3--------->YAB1<---------WOX13(1)            <---------YAB1           <----------DOF2     <-   cgttttaaataaagataaggttcttgaatgacgtggcgtttttatattagtattttgtgataaagcgtgtttacaaatgggccttaatgggctttgacca  7043600         --------->TOE1(3)        <---------O2        <---------ANAC58        <---------ANAC55(1)        <---------ANAC55(2)        <---------ANAC46       <----------------------TaNAC69(1)       <-----------------------TaNAC69(2)                                                          <-      --------->MYB52(1)      --------------->AGL15                                                <-    <---------MYB52(2)       ----------------->AG    --------->TOE2(3)                             <-   <---------ANAC55(2)       ========================================================================   --------->ANAC55(2)<---------RVE1(1)           --------------------->WRI1                       <-   --------->ANAC58   <---------CCA1(1)         ------>ZmHOX2a(1)                             -------   --------->ANAC58  <---------ARR11(3)        --------->TOE2(3)                             -------- -------->WRKY18(1)--------->ANAC58          ---------->ID1                 <----------DOF2 --------- -WRKY18(1)        --------->ANAC58         <-----------GT1  <---------ANAC58          --------->TOE2(3) ->HVH21<---------ANAC58   <-----------GT1<---------ICU4     <---------ANAC46          -------------- ----------HVH21   --------->ANAC46      --------->ICU4      <---------ANAC58          <-------------   tggtcaagtaacgtgaacaacacgatatttttccatttttgtaatttttcctcattcttagtttcgttttcaagggctcttttcttataccctaaaaagt  7043700                                                                                        <----------DOF2                                                                                  <---------DEAR3(1)                                                                     ------>ZmHOX2a(1) <---------ANAC46                                                                   ------>ZmHOX2a(2)  <-------TEIL                                                                  <------ZmHOX2a(2)  --------->ALFIN1                                                                 <---------ARR14(2)--------->ZAT2   *TSS                                                          --------->ARR14(2)<---------ZAT2 --------ANAC58                                               ------>ZmHOX2a(2)   <---------TOE1(2) --------ANAC55(1)                                            ==============HOX2a_HOX2a<---------ANAC58 --------ANAC58                                              <------ZmHOX2a(2)   <------NtERF2 ==MADS_MADS                                                 ===============HOX2a_HOX2a<---------ANAC58 --------ANAC46                                             --------->ARR14(2) <---------ANAC46 ---->GT1                                                   <---------ARR14(2) --------->ETT(1) ->DAG2                                --------->YAB1     --------->LBD16    <-----------HVH21    <-- ->DOF2<------ZmHOX2a(2)          --------->LBD16       <---------LBD16     <-----------RAV1(1)   <-- ->AGL15                     <---------GLK1(1)        --------->ARR14(2)    --------->bZIP60(1)  ---- --AGL15      ----------->GT1--------->GLK1(1)        <---------ARR14(2)    <---------bZIP60(1)  <---   tacttgtagatcaaaatcgaaaatcaatgggaactccagaatcatcgagagagccatgtccggatcggatcctagatgatgtcggaggtgcgtttgcgat  7043800                                                                           <---------ANAC58                                                                          <------NtERF2                                                                          --------->ATERF1(1)                                                                         ------>NtERF2                                                                         <---------ATERF1(1)                                                                         <---------RRTF1(1)                                                                         <---------DEAR4(2)                                                                         <---------ORA47(2)             <------ZmHOX2a(2)                                           <---------RAP2.3(1)             =============================HOX2a_HOX2a                    <---------ERF1            <---------ARR14(2)                                          <---------RAP2.3(3)            --------->ARR14(2)                                          <---------RAP2.3(2)          <---------MYB46(3)                                           <---------ABI4(1)       <---------MYB46(3)                                              --------->ATERF1(1)       <------MYB46(1)                                    <---------ZAT2--------->ATERF1(2)       <------MYB83                                       <---------At4g35610 --------->WRKY18(1)      <---------AtMYB61                                   --------->GLK1(1)<---------ANAC46      <---------MYB46(3)                                  --------->ZAT2--------->DEAR3(1)      --------->MYB55(2)                                --------->ATERF1(1)<---------ANAC58     <---------MYB52(1)                                 <------NtERF2 <---------RAP2.3(1)    <-------GAMYB                                      --------->LBD16--------->LBD16   <-----------RAV1(1)                               <------NtERF2    <---------ATERF1(1)   <---------MYB46(3)                               ------>NtERF2     ------>NtERF2 <---------At4g35610               <------ZmHOX2a(1)--------->LBD16  <---------DEAR3(1)           --- -------ANAC58        <-----------GT1             <---------LBD16   <---------LBD16              ---- -------ANAC58      <-----------ARR10           ----------------------->TaNAC69(2)             ------ ----->MYB55(2)    <---------ARR14(1)     --------->REM1(1)    <---------CCA1(2)    <----------DOF2 ------MYB46(3)    <---------CCA1(2) --------->GLK1(2)<---------DEAR3(1)<---------DEAR3(1) <---------KAN4(2)   gggtgctgttggtggatcagcgtatcacctcataagaggaatctacaactctcccggcggagctcgtctctccggcggcgttcaagctttgagaatgagc  7043900  Previous    Next  AGI:  At1g20340.1    Description:  DRT112 (DNA-damage-repair/toleration protein 112); copper ion binding / electron carrier. Identical to Plastocyanin major isoform, chloroplast precursor (DRT112) [Arabidopsis Thaliana] (GB:P42699;GB:Q9LN26); similar to plastocyanin [Arabidopsis thaliana] (TAIR:AT1G76100.1); similar to Plastocyanin, chloroplast precursor (GB:P00289); contains InterPro domain Blue (type 1) copper domain; (InterPro:IPR000923); contains InterPro domain Blue (type 1) copper subtype; (InterPro:IPR011572); contains InterPro domain Cupredoxin (InterPro:IPR008972); contains InterPro domain Plastocyanin; (InterPro:IPR002387); contains InterPro domain Blue (type 1) cop Range:  from: 7042419    to: 7043353    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g20350.1    Description:  ATTIM17-1 (Arabidopsis thaliana translocase inner membrane subunit 17-1); P-P-bond-hydrolysis-driven protein transmembrane transporter. similar to ATTIM17-2 (Arabidopsis thaliana translocase inner membrane subunit 17-2), P-P-bond-hydrolysis-driven protein transmembrane transporter [Arabidopsis thaliana] (TAIR:AT2G37410.1); similar to ATTIM17-2 (Arabidopsis thaliana translocase inner membrane subunit 17-2), P-P-bond-hydrolysis-driven protein transmembrane transporter [Arabidopsis thaliana] (TAIR:AT2G37410.2); similar to protein translocase [Brassica rapa] (GB:ABL97987.1); contains InterPro domain Mitochondrial import inner membrane translocase Range:  from: 7043703    to: 7044582    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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