Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            <---------At4g35610                                                                                    --------->ICU4                --------->WRKY45                                                    <---------YAB1              <----------DOF2                    --------->HSFB2a(2)              <---------ICU4       <---------ZAT6                            <---------HSFB2a(2)             --------->ICU4   <---------ZAT14                         ----------->GT1             --------->YAB1     --------->At4g35610   --------->ZAT14     ---------->DOF2---------->DOF2               --------->YAB1<--------HAHB4 ->TOE2(3)  <---------YAB1        --------->At4g35610              <---------YAB1<---------YAB1   aaaactatagtgtcatctttgactataaggcccattagccgaaagtggtttctagtagcacattgtgctataatagtaagagcattattattagctgtct  7023400                                                                               --------->YAB1                            --------->ATHB12                                  <---------YAB1                            <---------ICU4                                    --------->ICU4                       <---------YAB1                                       <---------ICU4                       <---------AHL20(2)                                   --------->YAB1                  <---------AHL20(2)                                       <---------ATHB12                <---------RVE1(1)                                          <---------ATHB51                <---------CCA1(1)                                          --------->ICU4               <---------ARR11(3)                                     --------->ANAC58               --------->ARR11(3)                                     --------->ANAC58               <---------GLK1(2)                                      --------->ANAC46  <----------ID1             <---------TOE2(3)           --------->ARR11(3)       --------->CCA1(2) <----------DOF2             <---------TOE1(3)           <---------ARR11(3)      <----------ID1-------->HAHB4   cttagattagtttttaagatttttttttattgattactaagaacatcttattctatctcttatataagagacaagcaataatgatgctttaagacaaatg  7023500                                                                                               <-----                                                                                               <-----                                                                                           xxxxxxxxxx                                                                                         <---------DAG2                                                                                         <----------DOF2                                                                                         xxxxxxxxxxxx                                                                                        xxxxxxxxxxxxx                                                                                        xxxxxxxxxxxxx                                                                                    xxxxxxxxxxxxxxxxx                                                                                   <xxxxxxxxxxxxxxxxx                                                                                  xxxxxxxxxxxxxxxxxxx                                                                                  <---------ANAC58                                                                                  <---------ANAC46 xx                                 --------->LBD16                                  <---------ANAC55(1)                                <---------HSFB2a(2)                               --------->ANAC55(2)                                --------->LBD16                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                ----------->GT1                   --------->DAG2  <---------ANAC55(2)                                --------->HSFB2a(2)              ---------->DOF2  <---------ANAC58xxx                               <---------LBD16                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                               <---------ANAC46     --------->ANAC58         <---------AHL20(2)<-----                               <---------HSFB2a(2)  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)xxxxxxxxxxxxx                              <---------LBD16       --------->ANAC58        --------->AHL20(2) xxxxxx                        <------------CBF            --------->ANAC46       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                    ----------------->AG   <---------ANAC58      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                    ----------------->AGL1 <---------ANAC46    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)xx  <---------ANAC46 <-----------------AGL1  <---------ANAC58  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)xxxx   gaagacgtagagtttcaacgtttccaaattggtccgggaaaaatgtcgttttatacgcaaactttcaaaaagtgaccatttaatacgtgaactttttgtg  7023600                                                            --------->ANAC46                                                            --------->ANAC58                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                          <xxxxxxxxxxxxxxxxsmallRNA(i)                                                        <xxxxxxxxxxxxxxxxsmallRNA(s)                                                       <xxxxxxxxxxxxxxxxsmallRNA(i)                                                       <---------WRKY18(1)                                 <---------DEAR3(2)   --------->WRKY12                                --------->MYB52(2)    --------->WRKY45                 <---------AHL20(2)                   --------->WRKY38(1)          --------->YAB1      <---------MYB52(1) <------------CBF      --------->AHL20(2) <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)--------->ANAC58 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)         xxxxxxxxxxxxxxxx>smallRNA(s) ----ANAC58     --------->YAB1<-----------HVH21<---------YAB1 ----ANAC58  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxx>smallRNA(l2)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)              <---------MYB52(1) xxxxxxxxxxx>smallRNA(si3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)      <xxxxxxxxxxxxxxxxsmallRNA(s) xxxxxxxxxx>smallRNA(le3)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      <---------ARR14(2) xxxxxxxxxx>smallRNA(si3)<---------WRKY18(1)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxx>smallRNA(le3)    --------->WRKY38(1) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<---------ARR11(3) xxsmallRNA(se3)--------->AHL20(2)     --------->ANAC46<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxx>smallRNA(si3)xxxxxxxxxxxxxxxx>smallRNA(s)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <----------DOF2 xxxxxxxxxxxxxxxxxxx>smallRNA(le3)  <xxxxxxxxxxxxxxxxsmallRNA(i)   --------->ARR14(2)              -- xxxxxxxxxxxxxxxxxxx>smallRNA(le3)<xxxxxxxxxxxxxxxxsmallRNA(s) xxxxxxxxxxxxxxxxxxx>smallRNA(se3) <--- ------RAV1(1) xxxxxxxxxxxxxxxx>smallRNA(i) xxxxxxxxxxxxxxxx>smallRNA(i)       --------->DOF5.7(2)--- xxxxxxxxx>smallRNA(le3)--------->WRKY12 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <-------GAMYB--------->MYB52(1) xxxxxxxxxxxxxxxx>smallRNA(le3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)<xxxxxxxxxxxxxxxxsmallRNA(s) <---- xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<xxxxxxxxxxxxxxxxsmallRNA(s)  xxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxxxxxx>smallRNA(si3)<---------MYB46(3)<---------YAB1<xxxxxxxxxxxxxxxxsmallRNA(s)    -----   tggccaaataaaacataataaaaatgttgaccggtcgtttcacacaaatgttattgttgaccaggccaaaatccccataccgttatctttttctaacgga  7023700                    <---------MYB52(1)                     <------------CBF                  ----------->GT1                   --------->TGA2(2)                  --------->ANAC58                 <-----------HVH21          <---------MYB52(1)                       <-----------TGA1         <-------GAMYB                            --------->O2        <---------ANAC58                          --------->ANAC46        <---------ANAC58                          --------->TGA2(1)        <---------ANAC55(2)                       <---------O2        --------->ANAC55(2)                       <---------bZIP60(1)     ------------>MYB.PH3(1)   <---------ANAC46   --------->bZIP60(1) <---------MYB52(1)--------->TOE2(3)              --------->bZIP60(2) --------->GT1    --------->ANAC46                <---------TGA2(1) ---ZmHOX2a(2)    --------->ANAC58               <-----------STF1 --->ZmHOX2a(2) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     --------->ATHB12             <------------CBF -----ARR14(2)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    <---------AHL20(2)       <xxxxxxxxxxxxxxxxxx ---->ARR14(2)  <---------ALFIN1 ------>ZmHOX2a(1)<<<<<<<<<<HY5            --------->YAB1 --------->ATHB12   tccgttaattccgttaccacacgttaattagtttcctgtaatactcaaaacgacgtcatttcattgaaatcaaaaaatcaaaattcccaaattgatttca  7023800                                                              --------->REM1(1)                                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                            ----------->RAV1(1)     --------->TOE2(3)                                                      <---------O2               <---------GLK1(2)                                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                  <-----------HVH21             <------ZmHOX2a(1)                                                  <---------------AGL15 <---------------AGL15  ------                                                  ======================================MADS_MADS                                                --------->At4g35610     --------------->AGL15  ------                                             <---------At4g35610       <-----------------AGL1 <------ xxxxsmallRNA(si3)                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<----------DOF2   <-------GAMYB   aaatccctaaattccaaaatggaatccaattcatttttcttcaatccatctgcttcacatggcaacatcatgttcttctttaggaatctcaatcccgttg  7023900                                                                                                   --       <----------DOF2                                                        --------->AHL20(2)   --     <-------TEIL                                                             <---------AHL20(2)  <xx  --------->HSFB2a(1)                        --------->HSFB2a(1)       ----------->GT1           ---- <---------TOE1(2)       --------->YAB1      --------->HSFC1(2)      <---------ANAC58            ---- --->WRKY38(1)           --------->TOE2(3)   <---------HSFB2a(1)     <---------ANAC58            <--- --->WRKY12            <---------ARR11(3)    <---------HSFC1(2)  ---------->ID1                  ---- ---MYB52(1)       --------->YAB1  <---------ICU4              <-----------RAV1(1)     <xxxxxxxxxxxxx   tccaaggttcttttctcactctcataatcttatttcatcatgttggaagtttccctgtttttgttttgttgtcttgtgaataaaatgttacgaacacaca  7024000 ------->ANAC46                                                                      <------ZmHOX2a(2) ------->TGA1a                  xxxxxxxxxxxxxxxx>smallRNA(s)      --------->ANAC46   ================ xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                    --------->MYB52(2)            --------->ARR11(3) ----->ANAC58                 --------->TOE1(2)     <---------MYB52(1)              <---------ARR11(3) ----->ANAC46              <-----------GT1        <---------MYB46(3)         ===============HOX2a_HOX2a ------ALFIN1           <---------ICU4          <---------At4g35610          <------ZmHOX2a(1) ----->ANAC58      <---------YAB1               --------->At4g35610     --------->ALFIN1  --------->YAB1 xxxxxxxxxxsmallRNA(i2) --------->YAB1        --------->MYB46(3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   cacatcagaaccaatttgaatatgaataataacattcgactattgacaacagctgttcgtttgaattcacgaagggggaggaacaagatcgatgatgaac  7024100                                                                                                 xxxx                                                                                               <xxxxx                                                                                               <-----                                                                                              <------                                              <----------DOF2                                 <xxxxxx                                             ------>ZmHOX2a(2)                                xxxxxxx                                            <------ZmHOX2a(2)                                 <------                                           <---------ARR14(2)                                <-------                                           <---------ARR11(3)                                <xxxxxxx                                           --------->ARR14(2)                              xxxxxxxxxx                                           --------->GLK1(2)                              xxxxxxxxxxx                                           --------->ARR14(3)                            xxxxxxxxxxxx           ---------->DOF2                 <---------ARR14(3)                      xxxxxxxxxxxxxxxxxx          xxxxxxxxxxxxxxxx>smallRNA(s)     <-----------ARR10                     <xxxxxxxxxxxxxxxxxxx        --------->TOE2(3)                  --------->ARR11(3)        ------>NtERF2 <xxxxxxxxxxxxxxxxx   <------ZmHOX2a(1)           --------->At4g35610                  --------->DEAR3(1)  xxxxxxxxxxxxx  ----------->GT1              <---------At4g35610              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) =========HOX2a_HOX2a      <----------DOF2<------ZmHOX2a(1)<---------YAB1       xxxxxxxxxxxxxxxx>smallRNA(i)   aaggaggaaacatcaaagcgaaggcccttctttagctctcttgaggatctttacgacgatgactattacgacgaccaattgctgaaaataagaggctgtt  7024200        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     <------MYB83     <------MYB46(1) --------->ARR14(2) <---------ARR14(2) xxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxxxxxxxxxxxxxxxxxsmallRNA(s2) ----MYB52(1) -----HVH21 xxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxx>smallRNA(i) -GAMYB xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) --MYB46(3)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    ---------->ID1 xxxxxxxxxxxxxxxxsmallRNA(se3)                      --------->ARR14(2) xxxxxx>smallRNA(s)                                 <---------ARR14(2) xxxxx>smallRNA(s)                                 <------ZmHOX2a(1) xxxxxxxxxx>smallRNA(l2)                         <---------TOE2(3)                  <---------ATHB12 xxxx>smallRNA(se3)                              <---------TOE1(3)          --------->GLK1(2) xxxsmallRNA(si3)                          <------ZmHOX2a(1)               --------->ARR11(3)       < xxxxxsmallRNA(si3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                 <---------GLK1(2)<-------- xxxxxxxxxx>smallRNA(fl3)                <---------TOE2(3)                 <---------ARR11(3) <------ZmHOX2a(1)   agggatttggtttttagaatttagggatttgatttttggaatttaggaattaaggatttgtttttttggaatttagagattttgaaatcaattttaggaa  7024300  Previous    Next  AGI:  At1g20280.1    Description:  homeobox-leucine zipper protein-related. similar to homeobox-leucine zipper protein-related [Arabidopsis thaliana] (TAIR:AT1G61200.1) Range:  from: 7023819    to: 7024202    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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