Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     <-------MYC2                                                   ------->MYC3                                                   ------->MYC2                                                   <-------MYC3                                                ------->GAMYB                                                <---------ALFIN1                                               --------->MYB46(3)                                      --------->TOE2(1)                                      --------->TOE1(1)                              <---------O2    -------->P                         --------->ANAC58 --------->ANAC58                 <-----------GT1         <-                         --------->ANAC46 --------->ANAC58             <----------DOF2          -----                    <---------At4g35610   --------->ANAC55(2)     <---------ARR11(3)            =====        --------->AHL20(2)    --------->O2--------->ANAC46        --------->ARR11(3)          <------        <---------AHL20(2)   ----------------------->TaNAC69(2)  <---------CCA1(2)            -------      <----------DOF2    --------->ANAC58--------->SPL7    <---------ARR14(2)       --------->CCA1(2) ----->YAB1         --------->At4g35610<---------SPL7      --------->GLK1(2)       <---------ARR11(3) ----->TOE2(3)    ---------->CDC5    <---------------AtSPL3--------->ARR14(2)      --------->ARR11(3)   cttaatgtctttaaattccctcagcacaagacacttgtcatcgtacgcaaccacgttcgagtatctaatatctcttttatccatagatatgttcttgatc  7014800           --------->ZAT18           <---------ZAT18                                                       <--------P         --------->PCF2                                                         <-------GAMYB    <---------ANAC58                                                           <---------MYB46(3)  --    <---------ANAC58                 <---------ZAT14                           <---------DEAR3(2)  -- --------MYB52(1)       ------>ZmHOX2a(1)                                      ----------->GT1    --- ->ZmHOX2a(2)       <---------ARR14(2)                      <----------DOF2   <---------DEAR3(1) <--- ==============================HOX2a_HOX2a            <---------At5g28300 <-----------RAV1(2)<------- ---ARR14(2)        --------->ARR14(2)        --------->GLK1(2)         <-----------HVH21  <---------ANAC58 -->ARR14(2)<---------ALFIN1    <---------ANAC46     <-----------GT1 ---------->DOF2       <---------ANAC58   cgcttggcgagagcccacttcgaatcctcgagtagtgtgtaaactgatattctttttaccgtctttgatatcaaagtcaggcggttgatattttcgtttg  7014900 ---->NtERF2                  ------->TEIL                    <---------LBD16 ------->LBD16               <---------CCA1(2)             <-----------HVH21 ------>RAP2.6(2)       <---------ARR14(2)              ------>ZmHOX2a(1)      --------->YAB1       - ------LBD16            --------->ARR14(2)     <---------ANAC58        ---------->DOF2             -- --MYB52(1)    ------>ZmHOX2a(1)               <---------ANAC58<---------LBD16<---------YAB1       --   ccgcaaataatgtattcctgtgatcaaatctgaatcttgaaggaatcagtcgtgcttcctctgtctcgggattaaaagctatgatgctcccatcgtttct  7015000                                                     <----------DOF2                                                     <---------DAG2                                                 <------ZmHOX2a(2)                                                <---------ARR11(3)                                                --------->ARR11(3)                                               --------->At4g35610                                               <---------At4g35610                                               <---------bZIP60(1)                                               --------->bZIP60(1)                 <---------MYB52(1)                                          ======================bZIP_DOF      --------->ARR14(2)                                          <---------ANAC46                    <---------ARR14(2)                                          <---------TGA1a                   <---------DEAR3(2)           --------->ALFIN1               --------->TGA1a                  <---------MYB46(3)    <---------ATHB12                      --------->O2                 <---------AtMYB61            < -------->MYB46(3)  --------->ANAC58      <---------O2              <---------AtMYB61             <-- ------->ANAC58     --------->ANAC46   <---------ANAC58             ----------->HVH21             --- ------->ANAC58     --------->ANAC58   <---------ANAC58             --------->ALFIN1              ---   caaccaatgaagagtgttgtccaagtaaacaggtttcattagcgtcgtgagatcactttttgagctaggggtgatggtcgtttccgataatctccatgag  7015100                                                          ------->TEIL                <---------ARR11(1)                       <---------CCA1(2)            --------->HSFB2a(2)                          <---------GLK1(2)                         --           ------>ZmHOX2a(2)                         ------>ZmHOX2a(2)                            ---         --------->ARR11(3)                         <------ZmHOX2a(2)                            <---     <---------At4g35610                           <---------ARR11(3)                           -----    <---------DEAR3(1)                             <---------ARR14(3)                           -----  <-----------HVH21                                --------->ARR14(2)                          ------ --------->ANAC46                           <---------At4g35610     --------->MYB55(2)        ------- ------------AtMYB77            <---------ANAC58   --------->ARR14(3)                        -------- -------ARR14(2)------->TEIL    <---------ANAC46   --------->ARR11(3)                   --------->ANAC46 ------>GLK1(2)<---------CCA1(2)<---------ANAC58   <---------ARR14(2)               <---------At5g28300 ------>ARR14(2)--------->GLK1(2)           --------->At4g35610     <---------MYB46(3) --------->LBD16   tatccgtcgctgatctcgaatctatacagcgtttgcgtctcgagtatgcagacgatcttgaatctcatggtggttcgatttcgagttaccgcgaaaccaa  7015200                                                          --------->HSFB2a(2)                                                          <---------HSFB2a(2)         --------->GLK1(1)                                                       --------->ARR11(3)             <---------GLK1(1) --------->ANAC46                          --------->WRKY45                          <---------ARR14(2) ------->ANAC46                          <----------DOF2 ------>ZmHOX2a(2)           --------->ARR14(2) ---->GAMYB            <---------At4g35610 --------->WRKY38(1)                    --------->LBD16 ------ALFIN1          --------->At4g35610 ----------->HVH21                     --------->ANAC55(2) ->MYB46(1)       --------->YAB1<------MYB83  -------->ZAP1   --------->ARR14(2) <---------ANAC55(1) ->MYB83         <---------YAB1 <------MYB46(1)      <---------KAN4(1)           <---------ANAC46 ----->RAV1(1)--------->ICU4   <---------TOE1(2)     --------->KAN4(1)           <---------ANAC55(2) -->AtMYB61   ------>ZmHOX2a(1)<---------TOE2(2)    <---------KAN4(2)           <---------LBD16 ->MYB46(3)---------->ID1   --------->YAB1 --------->WRKY12--------->LBD16     <-----------GT1   cacacatcgctctgtccttatgatcagctatcgtaggtataagctttgacccagaatgatccagaattcgaaactgttttgttacgggatttgcgatgaa  7015300             --------->YAB1             --------->ATHB12            <---------YAB1     --------->AtMYB61         <------NtERF2    --------->MYB46(3)        <------NtERF2                                                     -----    ------------>CBF          --------->LBD16                                               <--------   ------>NtERF2             <---------DEAR3(1)                            ------------>CBF <--------  --------->RAP2.6(2)       <---------LBD16                        --------->ANAC58      <-----------GT1 --------->ZAT18  <------ZmHOX2a(1)            ----------->GT1     --------->ANAC58  <---------AHL20(2)   gaggccaccaatgtatgataggagaagaaggccggagcatgagccaaaaatgtaacatcgctcagtagtaagcacattacaatctattttttttccttgt  7015400                                                    >>>>>>>>>>>>>AGL25                                                 --------------->AGL15                                                 <---------------AGL15                                                <-----------------AGL2                                                ----------------->AG                                                <-----------------AG                                                <-----------------AGL3                                                ----------------->AGL1                                                <-----------------AGL1            <------ZmHOX2a(1)          ----------->HVH21         ---------->DOF2          <---------TOE1(2)         --------->AHL20(1)        --------->TOE2(3) ------>HVH21                      --------->AHL20(2)        ----------->GT1            --------->DAG2 -ANAC58  <---------TOE2(2)  <------NtERF2      ----------------->AGL3                 ---------->DOF2 -ANAC58 <-----------RAV1(2)----------->GT1     ----------------->AGL2         ----------->HVH21   gacatagagtcgcaggaagagaccgaaggctggcaaaatatatgacatgagccaaaaatggaaatgttaaagaaacttggtctgacccaaaaagtgtatt  7015500                                                                                                    -                                                                                                    -                                                                                                    <                                --------->ICU4                                                      <                           ----------->GT1                                                          -                       --------->ATHB12                                                            --                      <---------YAB1                                                               <-                     <-------TEIL                                                                <---                    --------->CCA1(2)                         <---------CCA1(1)               -------                    --------->ARR14(1)         --------->ANAC58                               <------                   --------->ARR11(1)          --------->ANAC58     <---------ANAC58  <---------ARR14(2)                   <---------ARR14(2)   <---------ANAC58      <---------RVE1(1)       <-----------ARR10                   --------->ARR14(2)   <---------ANAC58     <---------ARR11(3)       --------->ARR14(2)                 ----------->ARR10  <---------AHL20(2)       --------->ARR11(3)       --------->GLK1(2)            <-----------RAV1(2) --------->AHL20(2)  <---------ICU4  <---------ANAC58 <---------GLK1(2)   ttttgtatttagggccagatagatacgattggaaatatttattcgtgcaacgcatcatcgctagatatttgggttccaatctgaagagaatctcgtctag  7015600    ---------->DOF2  ------>ZmHOX2a(2) --------->CCA1(2) <------ZmHOX2a(2) -------->AGP1 -------->ARR11(3) ---------ARR11(3) ---------ARR14(2)                         <---------YAB1 -------->ARR14(2)                        --------->ARR11(3) ------->GLK1(1)                          <---------ARR11(3)                       <---------ATHB12 --------GLK1(1)            --------->At4g35610                                    <---------YAB1 ---ZmHOX2a(1)      <---------YAB1       --------->YAB1                        ------>MYB46(1) -->HSFB2a(2)      <---------TOE2(3)    --------->ICU4         <-----------GT1 ------>MYB83 ---HSFB2a(2)     --------->YAB1 ------->TEIL       --------->ANAC46        --------->MYB46(3)     --   gagatctaaaggtaaaccattgatgatggaagatgaatcgaaatgatcatttacatgctactgtttttctcttcgtaaaccatccatgattcagagataa  7015700  Previous    Next  AGI:  At1g20240.1    Description:  metal ion binding. similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G20940.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043) Range:  from: 7012104    to: 7015207    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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