Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               --------->GLK1(2)                                             <---------ARR14(3)                                             --------->ARR11(3)                                             --------->ARR14(3)                                             --------->ARR14(2)                                             <---------ARR11(3)                                             <---------ARR14(2)                   --------->ARR11(3)    <------ZmHOX2a(1)                          --------->ALFIN1        --------->TOE2(3)        <---------GLK1(2)                  <---------TOE2(2)     --------->ARR14(2) --------MYB46(3)  <---------ARR11(3) <---------LBD16               <---------TOE1(2)     <---------ARR14(2) -------AtMYB61---------->DOF2 ----------->ARR10            --------->ZAT14       <---------ARR14(2)   gtggtcgtaaccttggtgaaagttctcaatggtttgattctcaggaaaatcttcaaactctctgcaatcgctggttttggttcggattgtgggatttgga  6956100                                                 --------->ANAC58                                               <-----------RAV1(2)                                           <---------ANAC58                                           <---------ANAC58                    ---------->DOF2        <---------ANAC46                ------>ZmHOX2a(2)       <---------ARR14(2)               --------->MYB52(2)                ==================HOX2a_HOX2a--------->ANAC46         <---------ANAC46            --------->ETT(2)            --------->ARR14(2)            <---------ANAC58      <-------GAMYB     --------->GLK1(2)                <---------ANAC58                <---------ANAC58     <---------DEAR3(1)     --------->ARR14(2)               <---------ANAC58             --------->ALFIN1     --------->ANAC46     <-----------ARR10           <---------ANAC46--------->ANAC58<---------O2         --------->MYB52(1)     <---------ARR14(2)    <------ZmHOX2a(1)<---------LBD16<------ZmHOX2a(1)<---------REM1(1)<<<<<<<<    <---------GLK1(2)--------->DAG2--------->ALFIN1  ---------->DOF2 <------NtERF2    <---------DOF5.7(2)   tagagagaatctcgtcgatcggaaaagtaggaacgtcgtggggtttcgcgcaggctaaagaggagagaggtggcttagttgtagtagtaaacggcgttgc  6956200                    <-----------HVH21                <------ZmHOX2a(1)                    --------->LBD16               --------->ATERF1(1)                   <---------ANAC58             <---------ANAC46                   <---------ANAC58             <---------DEAR3(1)               <---------ARR14(2)              <---------LBD16               --------->ARR14(2)            <---------TGA1a              <------ZmHOX2a(1)              --------->TGA1a              --------->HSFB2a(1)            <---------O2              <---------HSFB2a(1)            --------->O2            <---------TOE1(2)                --------->ANAC58            <---------TOE2(2)                --------->ANAC46         --------->TOE1(1)                   --------->ANAC58        <---------HSFB2a(2)                  <---------DEAR3(1)        --------->HSFB2a(2)                  ============================bZIP_DOF                   <        <---------LBD16        <---------At5g28300<------NtERF2             ------>ZmHOX2a(1)      <- <MYB2  ------>ZmHOX2a(1)  <---------ZAT6<------ZmHOX2a(1)    <----------DOF2          <----------DOF2   tctagctctcctcggaggattccgtcgcactgttacagtggaaggacacggcggaggactgagacttttctgtttctcctccattgtctctttctctcta  6956300                                                                               --------->ANAC58                                                                              --------->SPL7                                                                            <---------SPL7                                                                           <---------DEAR3(2)                                                                           <------MYB46(1)                                                                           <------MYB83                                                                          --------->MYB46(2)                                                                          --------->MYB59                                                                          --------->MYB111(2)                                                                          <---------MYB46(3)                                                                          --------->MYB111(1)                                                                      <---------TOE2(3)                                                                      <---------YAB1                                                                --------------->AGL15         -------                                                                <---------------AGL15     --------->AHL20(2)                                                               ------------>CBF--------->ANAC58                                                               ----------------->AGL3 --------->AHL20(1)                                                               <-----------------AG   --------->AHL20(2)            <---------ANAC58                                   ----------------->AGL2 <---------AHL20(2)            <---------ANAC58                                   <-----------------AGL3<---------AHL20(2)      --------->DAG2                                      --------->YAB1 <---------MYB55(1)   <------     ---------->DOF2               ------->GAMYB         <---------YAB1<---------MYB46(3) <---------AHL20(2)  <------NtERF2                  --------->At4g35610    <---------ARR11(3)<---------------AtSPL8 --------->LBD16       ------------>CBF                --------->CCA1(1) <--------P--------->YAB1 ---------ANAC46      <-----------GT1    ----------->GT1--------->ARR11(3)<---------------AtSPL3 --------LBD16  ------------>CBF <---------At4g35610   --------->RVE1(1)<-------GAMYB--------->AHL20(2)   tggcggaaaaaggagcgtttcaattttcaattttcaactgaaaatgtaaaatcaaaaatatcatcaccaattttggttggtacgaaaataatttaaataa  6956400                                                                                         <---------At4g35610                                                                                      ------>NtERF2                                      <---------YAB1                                 <---------ALFIN1                                   <----------DOF2                                   --------->DEAR3(1)                            <------------CBF                  <----------DOF2      ------>NtERF2        <---------ZAT18   --------->AHL20(1)            <---------ICU4             <---------ATERF1(1)        <-------TEIL      --------->AHL20(2)            <---------AHL20(2)        --------->DEAR3(1)    --------------->AtSPL3<---------AHL20(2)         --------->YAB1               --------->ANAC46 <----------DOF2          <---------AHL20(1)        <---------ATHB12             <---------LBD16 -->AHL20(2)             --------->AHL20(2)         --------->AHL20(2)   ------>ZmHOX2a(1)         <- ---AHL20(2)             --------->YAB1         ------------>CBF      ---------->ID1--------->ATERF1(1)   atactttcggtacacatttgaagcccattatattgggcttttgatttaagcccaataaatatttctttcttcgtcctcttgtctccgcctccgctcttaa  6956500            *TSS            <------NtERF2           --------->LBD16          --------->DEAR3(1)         --------->RAP2.3(1)         <------NtERF2         --------->ATERF1(1)         <---------LBD16        <------NtERF2        ------>NtERF2        <---------ATERF1(1)       <---------DEAR3(1)       --------->ATERF1(2)       <---------ATERF1(2)       --------->DEAR3(1)       --------->RAP2.3(2)      --------->RAP2.3(1)      --------->SPL7      --------->ERF1      --------->ATERF1(1)     ------>NtERF2     <------NtERF2     --------->ATERF1(1)     <---------ATERF1(1)     --------->DREB2C(1)     <---------DREB2C(1)    <---------ATERF1(1)    --------->DEAR3(1)   --------->ATERF1(1)                                    <----------DOF2   <------NtERF2   ---------->DOF2                <---------DOF5.7(2)                            ----   <---------RAP2.6(2)                         <----------DOF2                                  -----  <---------ATERF1(1)                    --------->ARR14(2)             ----------->GT1   <---------At4g35610 ----------HVH21 <----------DOF2<---------MYB52(1)<-----------GT1--------->ZAT6           --------->At4g35610   tcgtcgcggccgccggagactttaagcacaaaccgttggaccctataccctttaacgtctctttttctcactacttgtaaatttcttctctctgctcata  6956600                                <---------YAB1                             --------->GLK1(2)                             <---------ARR14(2)                            <---------GLK1(2)                                                   <----                         <-----------RAV1(2)                                                   ------                       ----------->RAV1(1)                                                     ------                       <---------ALFIN1                 <-----------GT1                        <-----                    --------->ANAC46          <-----------GT1                                 <------                    --------->ANAC58     <---------RVE1(1)                                   <-------                    --------->ANAC58     <---------CCA1(1)                                   <-------                --------->ARR11(3)      <---------ARR11(3)                                   <------- ----->DAG2     <---------ARR11(3)      --------->ARR11(3)    <----------DOF2           <-----------RAV1(1) ----->DOF2   --------->MYB59--------->ARR14(2)        <<<<<<<<<<GT-3b     <---------YAB1    <-------GAMYB   aagtcagtgtttaagtaaggtctcgccacaggttctgtttgagatattttgctatatttttcttctttttgtgttttctgattctatgtaatgtgggttg  6956700  <-----------GT1 ---GAMYB --->MYB111(2) --->MYB55(2) ----MYB46(3) --P             <---------ZAT2 --ANAC46       --------->ALFIN1 --ANAC58      <---------ZAT14  <-----------GT1  <---------TOE2(3)               --------->HSFB2a(2) --ANAC58      --------->ZAT14  <---------AHL20(2)<-----------RAV1(1)            <---------HSFB2a(2)   ttgttaactatctatactgtgctggtcattctattaacttgtgtttgtgtttatgttggctcttggaaactagtgtctctgtttcagaaattttcttact  6956800                                                                --------->ATHB12                                                               <---------YAB1                                                              <---------TOE2(3)                                                          ------>ZmHOX2a(1)                 <---------ANAC58                         <----------DOF2                      <-----                 <---------ANAC58               ------>ZmHOX2a(1)                            <-------             <---------ZAT6                   ----------->RAV1(2)                      <-----------RAV1(1)    --------->AHL20(2)                <---------ZAT2  --------->ARR14(2)              <---------TOE2(3) <---------ANAC55(2)                ------>ZmHOX2a(1) --------->GLK1(2)      ---------->ID1  <-------   atcacataaattttagagttcgtgcttaaatatggttcctagctgttctcctgtagaatcctttgatgtttggagttttgttcccattaatgttgtcttg  6956900                                 <----------DOF2                                <---------ANAC58                           <----------DOF2                       <---------ANAC58                                            <---------GLK1(1)                       <---------ANAC46                                            --------->GLK1(1) --------->ANAC58      <---------ANAC58                                     ---------->DOF2 --------->ANAC58 <-----------RAV1(1) <-----------RAV1(1)           --------->ARR11(3) ----ANAC46     --------->YAB1  <---------ANAC46    <---------GLK1(2)   <---------ANAC46     -------- --ANAC58      --------->ICU4   <---------ANAC58  <---------TOE2(3)--------->GLK1(1)<---------ARR11(3) --ANAC58      <---------ATHB51---------->ID1     <---------TOE1(3)<---------GLK1(1)--------->ARR11(3)   tgtaagcaaatgaaacaattatgttgcttctttggcgtttttgttgttgtttaaggttctctaatggagaaatctcgtgaaagtgatatcttgttctgta  6957000  Previous    Next  AGI:  At1g20060.1    Description:  kinesin motor protein-related. similar to kinesin motor protein-related [Arabidopsis thaliana] (TAIR:AT1G18550.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO60965.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752) Range:  from: 6950714    to: 6956284    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g20065.1    Description:  other RNA Range:  from: 6956512    to: 6958066    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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