Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               ------->GAMYB           --------->At4g35610           <---------At4g35610       --------->ANAC58     --------->ANAC58       --------->ANAC58     --------->ANAC58       --------->AtLEC2   <---------ALFIN1   --------->ARR11(3)   <---------ALFIN1  <---------CCA1(2)     --------->AtMYB61                                                  --------->ZAT2 ------->TEIL----------->HVH21                                          --------->At4g35610--------->At4g35610 -------ANAC46      ----------->HVH21                                <------ZmHOX2a(1)     <---------ZAT2 ----->HVH21<---------MYB52(2)                         --------->TOE2(3)<---------At4g35610<---------At4g35610 --->RAV1(2)<------------AtMYB77           --------->YAB1       <----------DOF2    ------->TEIL   atgtatatcatgcaactgaccagtgaccacacccattagcatctagtataactcttacattagtttctttaggaagctcatattgcatctagcagctgtg  6934800                                                              --------->At4g35610                                                              <---------At4g35610                                                             --------->ARR11(3)                     <---------ANAC58                    <------NtERF2                     <---------ANAC46                   --------->LBD16                     <---------ANAC58                  <---------ANAC58         --------->ARR11(3)             -------->ATHB1        ---------->DOF2     <---------ANAC46     ---------->DOF2             --------->ATHB51    --------->MYB46(3)    <---------ANAC58  ----------->RAV1(1)            <---------YAB1  --------->TOE1(3)         <---------LBD16   <----------ID1      <--------      ------>ZmHOX2a(1)     ------------------------>ANAC81  <---------ARR11(3) <---------ARR11(3)   tttatttcctctgtattattgtgtcttgaagcttaaccaaagaagaaaacagcaatggcggaacatctgccaatgcaacaaagatttcaagcggctttga  6934900             --------->LBD16           <---------LBD16          <-----------GT1                        <---------AtLEC2     <---------AHL20(2)                      <------------------SPL14             <----------DOF2   <---------CCA1(1)                  --------->GLK1(1)                          <---------ANAC58   <---------RVE1(1)                  <---------GLK1(1)                    --------->ATHB12  <---------GLK1(2)                   --------->ARR14(2)                  <------ZmHOX2a(2)  <---------ARR11(3)                  <---------ARR14(2)                 <---------ARR11(3)  --------->ARR11(3)           --------->At4g35610                       --------->ARR11(3) <-------- --DOF2  <-----------GT1       <---------At4g35610               <---------YAB1  <---------ANAC58 <--   agaagattttttttccggttttattttgtttatagctgagaattccctcttgtatggatttgatattttgaataagatcatttgcttcttggtattggtg  6935000                              <----------DOF2                            <---------At4g35610                            --------->At4g35610                          --------->ZAT18                                                      ------                          <---------ZAT18                                                      <-----                     ---------->DOF2                               <---------ANAC46  <---------ANAC58 -AtMYB61        <---------ZAT6                                 --------->GLK1(2)    <---------ANAC58 -------ANAC46 <---------ANAC46    <---------At4g35610         <---------GLK1(2)     <---------ANAC46   ttgtatgtcgaatcactgagtgtgaaagtgagctttctgcttcgcaccaattcaaatccaacttcgattctgtatacaacaagtatggcttattgcagaa  6935100                                                                                              -------                                                                                              -------                                                                                       ------>NtERF2                                                                                       <---------ATERF1(1)                                                                                      --------->DEAR3(1)                                                                                     <------NtERF2                                                                                     --------->RAP2.3(1)          <-----------GT1                                   --------->ARR11(3)       --------->ATERF1(1)   <---------ANAC55(2)                             <---------ANAC46                 ------>NtERF2   <---------ANAC58                              <-------TEIL                       <---------ATERF1(1)   --------->ANAC55(2)                           --------->ZAT14   <----------DOF2 --------->DEAR3(1)   <---------ANAC46        <-----------GT1       <---------ZAT14  <---------ANAC58 --------->ANAC46   <---------ANAC58       ---------->DOF2       <-----------HVH21 <---------ANAC58 <---------DEAR3(1) --->ARR14(2)          <----------DOF2    <---------SPL7   --------->ATHB12     --------->ANAC46 ----ARR14(2)  <---------MYB52(1)       --------->MYB59   --------->ICU4      <-----------GT1 -------   acgtttcgtatttaaccggtttcttctttaaaccgctaaatttcggtccggttcagtggaatgattttgcttttgggtttaaacgacgccgtctccaagc  6935200         *TSS      <---------YAB1        <---------LBD16  --------->ARR14(2) ------>ZmHOX2a(1)         --------->MYB52(1)<---------ARR14(2)                            <---------DAG2 -->ANAC58                ----------->HVH21<---------MYB46(3)                              <--------- -->ANAC58         <---------ZAT18       <---------At4g35610                     <---------TOE2(3) -->ANAC46         --------->ZAT18<------ZmHOX2a(1)      <---------CCA1(2)     ---------->DOF2    ---   ctcctcttatttttggattagggcacaattgacggaggaacacagcggtttctcttctcaaatctctcacaaaaatttcatcaaaggtttcgactttttt  6935300                                                                             <---------ARR11(3)   <------MYB83              <------ZmHOX2a(1)                               --------->ARR11(3)   <------MYB46(1)     <---------LBD16                         <---------TOE2(3)  --------->MYB111(1)--------->AtMYB61                     <---------At4g35610 <---------ANAC58  --------->MYB59   <---------ZAT2         --------->YAB1  --------->At4g35610 <---------ANAC58   >>> -DOF2       --------->At4g35610   ---------->DOF2      <------ZmHOX2a(1) --------->YAB1 <----------DOF2 ------>ATHB12     ------>NtERF2 ----------->HVH21---------->DOF2<------ZmHOX2a(1)  <---------GLK1(1)   tgatttggtagaagaagatgccaccttcggaggatgtgaaagctatgaagatgaaagaggaggctgaggaagacaataagagcttgagttcctttgcgaa  6935400              --------->At5g28300              --------->DOF5.7(2)                                                               -----          --------->MYB52(1)                                               <---------MYB52(2)   <----        --------->ANAC46                                              --------->YAB1       <---------At4g35610        --------->ANAC58                                             <---------YAB1        --------->At4g35610        --------->MYB46(3)                                         --------->YAB1     --------->ANAC58        --------->ANAC58                                          --------->ICU4      --------->ANAC58        <---------MYB52(2)                                        <---------YAB1   <---------ATHB12     --------->TOE1(2)                                          --------->YAB1    ------>MYB46(1)     --------->TOE2(2)   <---------MYB46(3)---------->DOF2     --------->ICU4     ------>MYB83  ----- >>>>>>TBF1  ----------->GT1      --------->ARR11(3)     ----------->TGA1  --------->MYB46(3)  <-----   gaagaaacccacgaacggtaacaatgctggttcgaagaaattgaagaaagaagagaacgatgacgatgatgatgataacaaacctatcaagtcatctgta  6935500                                                                                       <------MYB83                                                                                       <------MYB46(1)                                                                                      <---------AtMYB61                                                                                     <---------MYB52(1)                        >>>>>>>>>TBF1                                               <-------GAMYB -->TEIL     --------->ANAC58                                                      <-----------RAV1(1) -----ARR14(2)      <---------ZAT14       ---------->DOF2                   --------->GLK1(1)     <-- ---->ARR14(2)      --------->ZAT14    --------->YAB1                       <---------GLK1(1)     --- ----CCA1(2) --------->ANAC58        <---------WOX13(1)                   <------ZmHOX2a(1)    ------   tctgggtctcgagctaagccagtgaagaagaaggaagagattgataaagacgatgagaagaagcctgtttctaagaggaattcttctgttggtgtctcaa  6935600                                                       <---------AHL20(2)                                                       <---------AHL20(1)                                                       --------->AHL20(1)                                                  --------->At5g28300        <---------YAB1                           <------MYB83 <-------TEIL  <----------DOF2                   <------MYB46(1)                  <---------YAB1 -------HSFB2a(1)                             <------ZmHOX2a(1)                 <---------ICU4 ------>HSFB2a(1)                           <---------TOE2(3)                  --------->ICU4 ---->DOF2  <-----------GT1    <---------ANAC46  ----------->GT1            <---------YAB1    <------   aggttcgatttttatttctttctctctctgtttgagtataaatattgaggatggtaaaatatttgatgaggcattgttttgattatgagtctctctcttt  6935700  Previous    Next  AGI:  At1g19980.1    Description:  cytomatrix protein-related. similar to myosin heavy chain-related [Arabidopsis thaliana] (TAIR:AT1G77580.1); similar to myosin heavy chain-related [Arabidopsis thaliana] (TAIR:AT1G77580.2); similar to unknown [Populus trichocarpa] (GB:ABK94224.1) Range:  from: 6933007    to: 6934993    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g19990.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G11600.1); similar to unknown [Populus trichocarpa] (GB:ABK92449.1) Range:  from: 6935209    to: 6936684    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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