Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->AHL20(2)     --------->YAB1    --------------->AGL15 <-----------GT1 ------AHL20(1) ----->AHL20(2) ----->AHL20(1) --->AHL20(1)                <------ZmHOX2a(1) ----AHL20(1)               --------->LBD16 ----AHL20(2)             <-----------RAV1(2)                          --------->ANAC58 >AHL20(1)  <---------YAB1<---------LBD16                              --------->ANAC58       <------ -AHL20(2)  --------->AHL20(2)                ----------->GT1     <----------ID1              ------- >AHL20(2)  <---------AHL20(2)      <---------TOE2(3)           ---------->DOF2              --------   attttactcataatataaatgcaaaaattcaggagattgagatagaaaatgttatattcaaactgaaaaagacaagtatggaaaacaatagagaaattaa  6904600                                                --------->YAB1                                              --------->ANAC58                                   --------------->AGL15                                   ------>ZmHOX2a(1)                                  <-----------------AG                                  ----------------->AGL3                                  ----------------->AG                                  <---------MYB59                                  <-----------------AGL1                   <---------WRKY18(1)   <---------TOE2(3)                  ----------->HVH21<---------------AGL15                     <-----------GT1      --------->AHL20(1)          <-----------------AGL3                --------->YAB1      <---------ARR11(3)    <---------AHL20(2)--------->ANAC58         <---------YAB1   --------->At4g35610 ---AHL20(2)      --------->WRKY45----------------->AGL2              <-----------GT1   <---------At4g35610 -->AHL20(2)      --------->WRKY12<-----------------AGL2          <----------DOF2       ----------->RAV1(2) ->AHL20(2)       --------->WRKY38(1)  <---------ICU4<-----------GT1 --------->YAB1   <-----------GT1   taaaccaatatactatagagttgaccagttttaattcctaattaaggcaagaatattacattttaggccttttatcattttacaaaattcacctgagaaa  6904700                                                                      <---------At4g35610                                                                      --------->At4g35610                                                                   --------->TGA2(2)                                                                  <-----------TGA1                                                                  <-----------HVH21                                                                 --------->ANAC58                                                                 <---------O2                                                                 --------->bZIP60(2)                <                                                                 --------->O2                     <--                                                                 --------->TGA1a                 ----                                                                 --------->bZIP60(1)             <---                                                                 <---------bZIP60(1)            -----                                                                 <---------ANAC55(2)       ----------                                                                 --------->ANAC55(1)       --------->MYB46(3)                            ----------->RAV1(2)                  --------->ANAC55(2)      --------->ANAC58                           <---------ALFIN1                      --------->ANAC58         --------->ANAC58                          --------->ZAT18                        --------->ANAC46        --------->WOX13(1)                        --------->PCF2                          <-----------STF1        <---------WRKY38(1)                 <---------ARR11(3)                            <---------ALFIN1--------->ANAC58 -----                 --------->AHL20(1)                           --------->MYB46(3)       --------->WRKY18(1)                 --------->ARR11(3)                         <-----------GT1    --------->ANAC58<-----     <-----------GT1  --------->MYB59                    --------->YAB1    --------->MYB46(3)--------   atttgataaaccctatggatatattaggcccactggcccagagcgagacaaaaacccattagtaaccacgtcatctatccaacgcattagtcaaccaatt  6904800                       <-----------bZIP910(2)                      --------->TGA2(2)                     <-----------HVH21                    --------->ANAC58                    --------->bZIP60(2)                    <---------TGA1a                    --------->ANAC46                    --------->ANAC58                    --------->O2                    --------->TGA1a              --------->GLK1(1)              <------ZmHOX2a(2)             <---------ARR14(2)             <---------ARR11(3)             --------->ARR11(3)                                                     --------->ATHB51             <---------ARR14(3)                                                     <---------ICU4      ========================bZIP_DOF                                              --------->YAB1      <----------DOF2<-----------TGA1                                       <----------DOF2 ------------CBF    <---------O2                                        ------->GAMYB -------YAB1 <-----------ARR10                                         <------------MYB.PH3(1) ----->AHL20(2)   <---------ALFIN1                                     <------------AtMYB77 ------AHL20(2)------>ZmHOX2a(2)                                      <---------At5g28300 ---->YAB1   --------->ARR14(3)                                      --------->MYB52(1)<---------AHL20(2) -->CBF   <---------TOE2(3)                                        <---------MYB52(2)  --------->AHL20(2) ---->AHL20(2)<---------GLK1(1)                                   ------>MYB83     --------->AHL20(2) ----ATHB12  --------->ARR14(2)                    --------->AHL20(2)<-----------GT1<--------HAHB4 ->WOX13(1) <------ZmHOX2a(1)                    <------------CBF ------>MYB46(1)  --------->ICU4 <--   aaaattgactttgaggatctccacgtcagccttctatttcaaaaattccaaaattgaataccaaaaccaaataaccgtcttttgaataattaaaaaaccg  6904900                                                                                                    -                                                                                                    <                                                                                                 <---                                                                                        <---------MYB46(3)                                                                                  <------------CBF <-                                                                    --------->GLK1(2)------------>AtMYB77                                                           --------->ANAC58   --------->ANAC58   ----                                                           --------->ANAC58  <---------TOE1(2)  <----                                           ------->TEIL--------->ANAC58 <-----------HVH21<-------GAMYB                                       --------------->AtSPL8  ---------->DOF2--------->ANAC58------- --------DOF2    ----------->TBP      <------------CBF --------->ANAC58<-----------RAV1(1)   <-------   ctataacatgagagacactatataagtgaaatctctagtacattgtacccattactctcgcaaacaaaagaaactgtcgcaagttattgacggttatcat  6905000   <---------ICU4  <---------YAB1                      --------->MYB52(1) -------->YAB1                --------->SPL7 ---------ICU4              --------->TOE1(2)                                                    <--- ------ICU4                 <---------SPL7       <---------GLK1(1)                 --------->ANAC58 --------YAB1              --------->ANAC58      --------->GLK1(1)      --------->ANAC58       <----- ----->YAB1                --------->ANAC58<---------ANAC46             --------->ANAC46    --------- -----YAB1                 <---------ANAC55(2) <------ZmHOX2a(1)        --------->ANAC58   <---------TOE2(3) -->YAB1     --------->HSFB2a(2)  --------->ANAC58               --------->DAG2    --------->ANAC58 --YAB1      <---------HSFB2a(2)  --------->ANAC58             ---------->DOF2     --------->ANAC46--   catcatcatcgttctctcgaagaaatggcacgtacgaagcaaactgcgaggaaatctactggtggaaaaggtccaaggaaggaactcgctaccaaggttc  6905100                                                   <---------ANAC46                                                   <---------ANAC58                                                   --------->ANAC55(2)    <---------ARR11(3)                             <---------ANAC58                         ---------    --------->ARR11(3)                        <---------YAB1                               <---------GLK1(2)   <---------CCA1(2)                      --------->ARR11(3)                             <---------YAB1 -------DOF2                            <---------TOE2(3)     --------->ARR11(3)       <-----------GT1 --TEIL<----------DOF2                  <---------TOE1(3)     <---------AHL20(1)  <---------TOE1(2) >HSFB2a(1)                      --------->YAB1  <-----------GT1                  <---------TOE1(3) ------->AHL20(2)    <----------DOF2    <---------YAB1        --------->AHL20(1)  <---------TOE2(3)   tttatatatctttgattttctaacttttgtatcagtgatattaagattatgttacgttgttgaatattttgagaatgggtttctaaggtttacgattctg  6905200                                                                            <-----------HVH21               <------ZmHOX2a(1)                                           --------->DEAR3(1)           --------->DEAR3(1)                                             <------------AtMYB77           <---------ANAC46                                               --------->HSFC1(2)          --------->ATERF1(1)                                             <---------HSFB2a(1)          <-----------------------TaNAC69(2)                              --------->HSFB2a(1)          <------NtERF2                                                   --------->DEAR3(2)         <---------RAP2.3(1)                                              --------->MYB46(3)         <---------DEAR4(2)                                               <---------HSFC1(2)         <---------ORA47(2)                                             --------->ARR14(2)         <---------ATERF1(1)           --------->ALFIN1              --------->HSFB2a(2)         <---------ERF1                <---------ANAC46              <---------HSFB2a(2)          <--        <---------RAP2.3(2)          <---------MYB46(3)              ------>ZmHOX2a(1)       --------        <---------RAP2.3(3)         --------->ALFIN1                <---------LBD16         ---------        <---------DEAR3(1)        <---------ANAC46              <---------ANAC58            <--------        <---------ATERF1(2)       <---------ANAC58              <---------ANAC58            <--------        --------->ATERF1(2)       <---------ANAC58           <---------ARR14(2)            <---------At4g35610       --------->ATERF1(1)      --------->SPL7               --------->ARR14(2)        <-----------HVH21    <-----------RAV1(2)       <---------SPL1(2)             <---------MYB52(1)   <----------DOF2<---- >GLK1(2)------>NtERF2        <---------SPL7          ----------->HVH21 <---------ARR14(2)-----------   tttttatcaggcggcgaggaaaactagacgaccgtaccgtggtggagtcaagagggctcaccgtttccgtcctggaaccgtcgctcttcggtcagattct  6905300                                                                                             --------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                           <---------LBD16                                                                                          --------->CCA1(2)                                                                                          <------ZmHOX2a(2)                                                                                          --------->ARR14(1)                                                                                         --------->ARR11(3)                                                                                         <---------ARR11(3)                                                                                         --------->ARR14(2)                                                                                         <---------ARR14(2)                                                              <---------ANAC58           --------->AGP1     <----------DOF2      --------->YAB1                      <---------ANAC46          <---------GLK1(1) --------DOF2            --------->KAN4(1)                    <---------ANAC58  --------->MYB52(1) ->GLK1(2)               <---------KAN4(1)               <---------At4g35610 <------ZmHOX2a(1)     -- >ARR14(2)              <---------KAN4(2)              <--------P            ====================HOX2a_HOX2a -GLK1(2)             --------->LBD16                --------->ATHB12      <---------ANAC46------>ZmHOX2a(2) -ARR14(2)       <-----------GT1       <---------TOE1(2) --------->At4g35610 =====================HOX2a_HOX2a --------------------ANAC81--------->GLK1(2)         <---------MYB46(3) --------->ALFIN1--------->GLK1(1) >ARR10    <---------MYB52(1)<---------ICU4  ----------------->AGL3   <---------ANAC46 ----------->ARR10   cttttctctttctgtttttttacccgaataatcttttctctcatgttctcaaaaatggttgctgtcttgttgatgtggaggataacagtgagatccgcaa  6905400                         --------->ANAC58                         --------->ANAC46                         --------->ANAC58                        <---------LBD16      <---------------AtSPL3      <---------------AtSPL8        <----------DOF2 <---------HSFB2a(2)    ------>ZmHOX2a(2) --------->HSFB2a(2)  --------->ARR14(2) ->LBD16      ------>MYB46(1)      <---------DAG2 >ANAC58      ------>MYB83--------->LBD16                                 <---------TOE1(3) >ANAC46    <---------MYB59       <---------ANAC58                        <---------TOE2(3) >ANAC58   --------->DEAR3(2)     <---------ANAC58                  --------->ARR11(3) ------->MYB52(1)     <---------ARR14(2)   --------->MYB46(3)       <---------ARR11(3)           <---   ataccagaagagtaccgacttgttgatccgcaaattgcctttccaacgacttgttcgtgaaatcgcccaagattttaaggtttattctaacttctctcga  6905500  Previous    Next  AGI:  At1g19890.1    Description:  ATMGH3/MGH3 (MALE-GAMETE-SPECIFIC HISTONE H3); DNA binding. Identical to Histone H3-like 2 (MGH3) [Arabidopsis Thaliana] (GB:Q9FXI7); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT5G10980.1); similar to histone H3.2 [Arabidopsis thaliana] (TAIR:AT4G40040.1); similar to histone H3.2 [Arabidopsis thaliana] (TAIR:AT4G40040.2); similar to Histone H3.3a (Somatic-like histone H3-2) (Histone soH3-2) (GB:Q402E2); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone H3; (InterPro:IPR000164) Range:  from: 6905025    to: 6906009    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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