Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     --------->ZAT18                                                --------->ALFIN1                                              <---------O2                                              --------->TGA1a                       ------>NtERF2          <---------TGA1a                      <---------ANAC46       <------NtERF2                      <----------ID1        ------>NtERF2               --------->MYB46(3)          --------->DEAR3(1)                                  <-----              ==========================================MYC_MYB                                <-----              -------->P<------NtERF2      ----------->HVH21                                ------->TEIL           --------->LBD16            <---------DOF5.7(2)                                   <--------          --------->ANAC46       <---------TOE1(2) <---------ZAT18                  ------>MYB46(1)        <---------At5g28300 ------->TEIL  --------->RAP2.3(1)                  <-----------GT1<------    <---------ZAT6 --------->ALFIN1 --------->DOF5.7(2)            <------ZmHOX2a(1)------>MYB83  ---   tagcgagagttaccgcaaccagtggcgacgaatcgaatgttaacgccgacgagtggccttagccgagtaggagagaccaagttaccttccatcgcacctt  6903700                   --------->ANAC58                   --------->ANAC58               ------>MYB46(1)                   --------->ANAC46            --------->At4g35610 -----DOF2  --------->GLK1(1)             --------->At4g35610   <---------ZAT2 ----DAG2  --------->ARR11(3)          ---------->DOF2     ------>ZmHOX2a(1)       ------>NtERF2    - -TOE1(2) --------->YAB1        --------->ANAC46--------->DEAR3(1)                --------->DEAR3(1)- ---DAG2 <---------ATHB12     ----------->RAV1(1) ------>MYB83  --------->ZAT2    ----------->HVH21 - ------->ID1<---------GLK1(1) <---------ALFIN1 <---------At4g35610       <----------DOF2          <--   ttcgttttccaatgatatcccaagccgtagcaccacagaacaaaagctcacctcccttctcctccgagctctcatctttcttctccgacgaattcatcgc  6903800                                                                                      <------NtERF2                                                                                      --------->At5g28300                                                                                      ------>NtERF2                                                                                     --------->LBD16                                                         ---------->DOF2            <---------DEAR3(1)                                                      ========================HOX2a_HOX2a                                                      <xxxxxxxxxxxxxxxxsmallRNA(s) <---------LBD16               ------>NtERF2                          <------ZmHOX2a(2)           --------->ANAC46              --------->DEAR3(1)                     <---------ARR14(2)         --------->GLK1(1)     <---------MYB52(1)                              --------->ARR14(2)         <---------GLK1(1) --------->LBD16                                     <---------ARR11(3)         --------->CCA1(2) ------>NtERF2<---------ETT(1)                       --------->AGP1            <---------ARR14(2) -------->ANAC58                                    --------->At4g35610  --------->GLK1(1)--------->ARR14(2) -------->ANAC46                                    --------->GLK1(1)    <---------GLK1(1)<---------ARR14(2) -------->ANAC58            --------->YAB1     --------->DAG2          <------ZmHOX2a(1)  --------->GLK1(2) -------ATERF1(1) --------->AtMYB61           ---------->DOF2    <---------YAB1--------->ARR14(2)<---   ttccgccattacttctccgaccaaaaactttcaaaatttcaaatttcaaaaagcagatccaaagacgattataggaattcggatacgcggcgaatcgtgt  6903900                                                                                           ----------                                                 ------>ZmHOX2a(2)                         <---------               <------NtERF2                   --------->ARR14(2)      <---------WOX13(1) -----------             <---------ANAC46              <---------At4g35610       --------->ATHB12     -----------             <---------ANAC58          <---------WOX13(1) --------->ANAC58                -----------             <---------ANAC58        --------->ATHB12     <----------ID1          ----------->GT1            <-----------------------TaNAC69(2) <---------ARR14(2)  <---------WOX13(1)    >>>>>>>>>MYB2            <---------LBD16         <---------YAB1        --------->ANAC58      --------->DAG2          --------->ALFIN1        <---------ANAC46      --------->CCA1(2)      --------->DAG2------>MYB83      ---------->DOF2 --------->MYB52(1)   --------->At4g35610---------->DOF2 ---------->DOF2------>MYB46(1) ------REM1(1)--------->LBD16     <---------ZAT6<------ZmHOX2a(2)--------->ATHB12 <----------ID1   tgaagctagaaagtggcgggaaaacaacggctagtagtgtgattgagcagatcggaagagacgacaaagattgattgaagaaaagggagaaaaccaaatt  6904000                                        --------->ANAC58    --------->TOE1(3)                   --------->ANAC58    --------->TOE2(3)                   --------->ANAC46 --------->GLK1(1)                   --------->TOE2(2) ----->AGL15                         --------->TOE1(2)                                              - ------AGL15              <---------ZAT14                                      <------ZmHOX2a(1)   -- ------>AGL2              --------->ZAT14 ---------->DOF2   *TSS              ----------->GT1      <- ------>AGL3          <---------------AtSPL8           ---------->DOF2--------->DAG2     ---------->DOF2 ------>AGL1--------->ANAC46----------->GT1    ----------->GT1       ---------->DOF2  ----------->TBP   cagaaaccctaaacacaaaacaaaatagtacagagaaaaactacgaaagaagtaaaaaaaagagagagagataaagtgagaggaaaatataaaaagaggg  6904100              <---------LBD16           --------->CCA1(2)        ----------->ARR10                                                                 <---------DAG2  <---------WOX13(1)                                      <---------AHL20(2)              <----------DOF2 <------------CBF                                   <---------AHL20(2)                   <---------ANAC58 -------->ATHB12     <-----------GT1              <----------DOF2  <---------DEAR3(1)    <---------ANAC58 ------->AHL20(2) --------->ARR14(2)     <-------TEIL    <---------AHL20(2)         <----------DOF2 --------AHL20(2) <---------ARR14(2) <---------KAN4(2)   --------->AHL20(2)--------->ATHB12       <--   attaattgaagagatttggggattttctctattaccaagaatatacatatttcttttattttaatttcttcggctcttcattgggtcttttgcttttttt  6904200                                                                                                 <---                                                                                                 ----                                              <---------ZAT18                                   -----                                              --------->ZAT14                        <---------ANAC58                                <---------ARR11(3)                                   <---------ANAC58                            <-----------GT1   --------->ZAT18                      <-----------GT1            ---------->ID1 ---------->ID1     <---------ZAT14        --------->TOE2(3)         <-----   <-----------GT1 <----------DOF2         <---------ANAC46         <---------At4g35610     <-------- -------ANAC46     <---------DAG2  <----------DOF2                  --------->At4g35610  ---------->ID1   ttgtgtaacgttttgtctctactttttttgtcactatcttttgttttgtgcactcgtggaaatttgttttagcttaatgtgtttttttcttgttgttatt  6904300                                           <-----------GT1                                      <---------RVE1(1)                                      <---------CCA1(1)                                     <---------AHL20(1)                                     --------->ARR11(3)                                     <---------ARR11(3) ------AHL20(2)                  ---------->DOF2                   --------------->AGL15          <-- ----->AHL20(2)                --------->AHL20(2)                  <----------DOF2                <-- ---->YAB1                     <---------AHL20(2)                ---------->ID1         ----------->GT1 ----YAB1         ------>ZmHOX2a(1)  --------->AHL20(1)         <-----------GT1        --------->DAG2 -YAB1      ---------->ID1 --------->AHL20(2)              <----------DOF2            ---------->DOF2   aaaatacaaagtttgtcttcctaagaaaatgaattaaaagatatttttctctccctgttttctttttttcttttttttgctaatgtgttaaagtgaaatt  6904400                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                            <---------ICU4  ---------                                                                      --------->YAB1        ---------                                                                    --------->AHL20(2)      <--------                                                                    --------->AHL20(1)  --------->AHL20(2) -------ANAC58                                                     --------->YAB1      --------->AHL20(2) -------ANAC58  <-----------GT1                 <---------TOE2(3)--------->AHL20(2)    <---------AHL20(2)   gtttgtcagtttattgttttactatatgttagtgaatagaaatagtttttgatgtttttatacatgaaaaaataataaacattgcataaataaataaaat  6904500        --------->AHL20(2)     --------->YAB1    --------------->AGL15 <-----------GT1 ------AHL20(1) ----->AHL20(1) ----->AHL20(2) ----AHL20(1)                <------ZmHOX2a(1) --->AHL20(1)               --------->LBD16 ----AHL20(2)             <---------LBD16                              --------->ANAC58 >AHL20(1)  <---------AHL20(2)                                         --------->ANAC58       ------- >AHL20(2)  --------->AHL20(2)      <---------TOE2(3)             <----------ID1              <------ -AHL20(2)  <---------YAB1<-----------RAV1(2) ----------->GT1   ---------->DOF2              --------   attttactcataatataaatgcaaaaattcaggagattgagatagaaaatgttatattcaaactgaaaaagacaagtatggaaaacaatagagaaattaa  6904600  Previous    Next  AGI:  At1g19880.1    Description:  regulator of chromosome condensation (RCC1) family protein. similar to UVR8 (UVB-RESISTANCE 8) [Arabidopsis thaliana] (TAIR:AT5G63860.1); similar to UVB-resistance protein UVR8 [Brassica rapa] (GB:ABV89658.1); similar to Os04g0662800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054159.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61033.1); contains InterPro domain Regulator of chromosome condensation, RCC1 (InterPro:IPR000408); contains InterPro domain Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091) Range:  from: 6900406    to: 6904060    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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