Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       --------->ARR14(2)                  <---------ANAC46                ------>ZmHOX2a(2)               <------ZmHOX2a(2)               --------->GLK1(1)              --------->AGP1              --------->ARR11(3)              <---------ARR11(3)              --------->ARR14(2)              <---------AGP1              <---------ARR14(2)         ------>MYB46(1)                                          ------>MYB83         --------->MYB52(1)                                       ------>MYB46(1)    --------->ARR11(3)       <---------MYB59                              <---------AHL20(2)  --------->AHL20(2) ->ANAC46------>MYB83<---------ARR14(2)  ---------->DOF2<-----------GT1 --------->YAB1--------->CCA1(2)   accatcaaacctaacagatctcgtatacagtaccagacaaaacaaaagccctaagtaatttccaaaccaaacaattaaaaaccctaagatttagacaaaa  6898300                                                        <---------HSFB2a(1)                                               --------->AHL20(2)                                             --------------->AGL15                                             <---------------AGL15                                            ------>ZmHOX2a(2)                                          <---------ARR11(3)             --------->ARR14(2)                                          <---------AGP1--------->HSFB2a(1)                                  --------->YAB1        <---------HSFC1(2)                           --------->ANAC58 ----------------->AGL3       <---------ARR14(2)                           --------->ANAC58 <-----------------AGL3      <---------GLK1(1)      ------                           --------->ANAC46<------ZmHOX2a(2)   --------->ZAT2 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                      <---------ETT(1)    <---------ARR14(2)   <---------ZAT2--------->LBD16  <------ZmHOX2a(2)                      <----------ID1      --------->ARR14(2)   <---------At4g35610           --------                   <---------ARR14(2)     --------->AGP1--------->HSFC1(2)  --------->ANAC46 --------                   --------->GLK1(2)      --------->ARR11(3) --------->HSFB2a(2)             <-------                   --------->ARR14(2)    <---------CCA1(2)   <---------HSFB2a(2)             <-------   ttagaaactaagtaatgccaaaatccgacaagacactaatatcagatcttaaaatagaaacttcgagcagagacaaatccgaaacagaaattgaagatcg  6898400                                                       --------->ARR14(2)                                                       <---------ARR14(2)                                                      <------ZmHOX2a(1)                                                    --------->MYB59                                             --------->ALFIN1                                            <------NtERF2                                            <-------GAMYB                                            --------->ATERF1(1)                                           <---------ANAC46                                           <---------DEAR3(2)                <---------LBD16                                           <---------ORA47(2)        --------->YAB1     --------->CCA1(2)                                           <---------MYB46(3)  <---------AtMYB61<------NtERF2         ---------->DOF2                  --------->ALFIN1 <---------LBD16  --------->ABI4(1) >ZmHOX2a(2)                              <---------DREB2C(2) <------NtERF2 ------>NtERF2 ->ARR11(3)                               <---------DEAR3(1)<---------DEAR3(1) --------->LBD16 ->ARR14(2)                              <---------ABI4(1) --------->At4g35610--------->DEAR3(1) --ARR14(2)                            <---------DEAR3(1)------>ZmHOX2a(2)--------->MYB46(3)--------- --ARR11(3)              ----------->GT1 --------->ZAT18 <---------DEAR3(1)--------->DEAR3(1)   cgagaacattacaaagagggagagaaaatgtcaaaacctcgagggcggtggagttaggatcggcggaggtatcatcaccgccggagcaagagatgagacg  6898500                   ------>ZmHOX2a(2)                  <------ZmHOX2a(2)                 --------->ARR11(3)                 --------->ARR14(2)                 <---------ARR11(3)                 <---------ARR14(2)                 --------->ARR14(3)                 <---------ARR14(3)                 --------->AGP1                           >>>>>>>>>TBF1                 <-----------ARR10                     >>>>>>>>>TBF1          <-----------GT1                --------->GLK1(1)                   >>>>>>>>>TBF1        <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                <---------GLK1(1)                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)               ----------->ARR10                 >>>>>>>>>TBF1  >>>>>>>>>TBF1<-----------GT1          --------->At4g35610                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)         -------          --------->ZAT2   --------->ATHB12   >>>>>>>>>TBF1  >>>>>>>>>TBF1<---------MYB52(1)<------ZmHOX2a(2) -->HVH21--------->GLK1(2)----------->HVH21  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  <---------YAB1   gagacaagaagaagctggagatcttcccatgactggttcttacaagaagaagaagaagaagaagaagaagaagaccgttttatcttcttattggatcagt  6898600                                                                      <---------ARR14(2)                                        <-------GAMYB                 --------->ARR14(2)          <--                                       <---------ANAC46           --------->At4g35610            <---                                       <---------MYB46(3)      ---------->DOF2                  -----        ---------->DOF2                <---------ANAC58   --------->DAG2                 --------->AHL20(2) --------->AHL20(2)                    <---------ANAC58  --------->DAG2    ---------->DOF2   -------- ---->GT1                           <-----------RAV1(1) ---------->DOF2--------->GLK1(1) <---------AHL20(2)   aaaataaacacaaagagagagaccagtagtactaactagtgtcgttggaaaatggagcaaaaggggaaagcggaactcaaagggaaggcattaaaatacg  6898700                                                                               ------>ZmHOX2a(2)                                                                              --------->GLK1(1)                                                                              <---------GLK1(1)                                                                             --------->ARR14(2)                                                                             <---------ARR14(2)                                                                             <---------ARR11(3)                                                                             --------->ARR11(3)                    --------->LBD16                                          <---------AGP1                   --------->ANAC46                                          --------->AGP1                   --------->ANAC58                         --------->MYB52(1)<------ZmHOX2a(2)                   --------->ANAC58                         <-----------GT1 --------->At4g35610 -------MYB52(1)<---------ARR14(2)                    ----------->GT1       <---------CCA1(2) ----GAMYB--------->CCA1(2)   <----------DOF2     ---------->DOF2           <---------At4g35610 ------>GT1     --------->ARR14(2)              <---------AHL20(2)      <-----------HVH21 ---->MYB.PH3(1)*TSS------>NtERF2               --------->AHL20(2)<-----------HVH21   gttaagtctgagatttggaatccgccagtctcctttctcttctgtccaaattaaaagcgaaataacgctgtcactgtcagatctctctcgtgatgactca  6898800                                              <-----------GT1                                           <---------ICU4                               --------->MYB46(3)                              -------->P  --------->AHL20(2)                            <----------DOF2                             --------->MYB52(1)                                   <---------ARR14(2)         <---------ICU4  <-----------GT1  <---------AHL20(2)----------->GT1       ------->TEIL    <---------YAB1 <----------DOF2        --------->ICU4  ---------->DOF2         --------->ARR14(2)   cattttcttattcattccttcctttttttactaaccgatgagtattaattactatatagctaaagtaacaaattcagatagatgtatatgctttcgaatt  6898900                                                 <---------YAB1                                                 --------->ICU4                   <-------TEIL                --------->YAB1               --------->DAG2      ----------->GT1       ----------->GT1--------->ANAC55(2)     <---------YAB1             <-----------GT1          ---       <---------MYB46(3)          --------->ANAC58       --------->TOE2(3)                     <----  <-------TEIL---------->DOF2      --------->ANAC58 <---------YAB1--------->GLK1(2)   --------->ETT(2)   catatacatcggttaaaaaagttcatgtaacaacaacaagtaaaacttatgatgatgaaacatcaacgattctataaactacatgttatcgaccgtatta  6899000                                      <---------MYB46(3)                                      ----------->GT1                                      <------MYB83                                   <---------ANAC58                                      <------MYB46(1)   <---------YAB1          <---------ICU4                                    <---------WOX13(1)<---------ICU4            --------->ATHB51                                 <------MYB83        --------->ICU4             --------->YAB1                                 <------MYB46(1)  --------->AHL20(2)           <---------ATHB51                          ------------>AtMYB77 <---------ICU4                  <---------ATHB12                       --------->YAB1<---------AtMYB61--------->YAB1        <---------AHL20(2)                 <---------YAB1<--------P     <---------ATHB51          -------->ATHB1          <---- ------>ZAT6  <---------YAB1 <---------MYB46(3)--------->YAB1          --------->ICU4<---------ANAC58 -------GT1<---------YAB1 --------->MYB52(1)  --------->ICU4 --------->ATHB12  --------->ICU4  <-----   acacttgtattttctgattatactaaaataacggttggattggttgaaataatgaattatgaattagtggggaattattcaattatggctagtcgataat  6899100                             ------->MYC3                        --------->ANAC58                        --------->ANAC58                 --------->YAB1               --------->AHL20(2)              --------->YAB1 <-------MYC3   <----------DOF2                      <---------TOE2(3)            <---------AHL20(2)          ------->MYC3                             <---------TOE1(3)  <           --------->YAB1  ------->TEIL <-------MYC3         <----------DOF2 <----------DOF2     <--- -------RAV1(1)--------->AHL20(1)  <-----------HVH21      <-----------GT1 ------>ZmHOX2a(2)  <------- ----TOE2(3)--------->AHL20(2)----------->HVH21     <----------DOF2   ----------->HVH21      <-------   gttggctcacctataaaaataataagacgcatgtgactgtcatgtgcttcatgtcttttttttcttttctctctgatcgctttgaggtttattagctttt  6899200  Previous    Next  AGI:  At1g19870.1    Description:  IQD32 (IQ-domain 32); calmodulin binding. Identical to Protein IQ-DOMAIN 32 (IQD32) [Arabidopsis Thaliana] (GB:Q9FXI5;GB:Q570I0;GB:Q8LFD0;GB:Q8LPF6); similar to IQD31 (IQ-domain 31), calmodulin binding [Arabidopsis thaliana] (TAIR:AT1G74690.1); similar to hypothetical protein OsJ_015789 [Oryza sativa (japonica cultivar-group)] (GB:EAZ32306.1); similar to OSIGBa0099L20.2 [Oryza sativa (indica cultivar-group)] (GB:CAH66887.1); similar to Os04g0663100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054161.1); contains InterPro domain IQ calmodulin-binding region (InterPro:IPR000048) Range:  from: 6895006    to: 6898716    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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