Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   <------ZmHOX2a(2)                                                                              <---------DEAR3(2)                                                                          --------->DEAR3(1)                                                                         --------->DEAR3(2)                                                  --------->TOE1(2)    <---------ALFIN1                                                  --------->TOE2(2)   <---------ZAT14        <---------AtLEC2       <-----------HVH21 --------->YAB1       --------->ZAT14               < ----->TEIL               --------->SPL7 <-----------HVH21        --------->GLK1(2)                 - --------->AtSPL8       <---------SPL7 --------->LBD16    ----------->HVH21<-----------HVH21 <-------   gtacttccttccatggcgattaaactcgtaccgagtcaaaccgggtcagaatcatacgaactgacaacaatctgcaccgtcggatcaccagatagctttc  6872800                 --------->MYB46(3)         <---------ANAC58               --------->MYB52(1)           <---------ANAC58            --------->ANAC58               --------->STY1(2)            --------->ANAC58            ------>ZmHOX2a(2)     ------>NtERF2                    --------->ARR11(3)    --------->DEAR3(1)                --------->ARR14(2)    --------->ANAC58                  <---------ARR11(3)    --------->bZIP60(2)               <-----------ARR10    <---------bZIP60(1)               <---------ARR14(2)    --------->ANAC58                  --------->AGP1                                           ------    --------->bZIP60(1)               <---------AGP1                                           ------    --------->ANAC46            <---------ICU4      <---------YAB1                         <------ZmHOX2a(1)  <---------ATERF1(1)           --------->YAB1   <----------DOF2                    ==============HOX2a_HOX2a ----------->HVH21------->GAMYB<---------ATHB12 <---------ANAC58                    <------ZmHOX2a(2) --------->DEAR3(1)          --------->WOX13(1) <---------ANAC58     <---------MYB52(1) <---------ICU4 ---------At4g35610        <-------TEIL<------ZmHOX2a(2)            <-------GAMYB  --------->ARR11(3) -------->At4g35610  <---------ETT(2)<---------CCA1(2)        ------>ZmHOX2a(2)    <---------ARR11(3) ---DOF2  ---------->DOF2 --------->GLK1(2)<---------STY1(2)  ====================================HOX2a_HOX2a   tcagcgacgccatgaagcaacggtcgagattcaatcatcagatctagcttgcttttgattttgatccctccgttacatttctgaagatcatcaggacaag  6872900                                                                                          <---------MYB46(3)                                                                                         <---------TOE1(2)                                                                                   ------->GAMYB                                                                                 ------>MYB83                                                                                 ------>MYB46(1)                                              <----------DOF2                   --------->MYB52(1)                                           ------>ZmHOX2a(2)          --------->ANAC58   <---------TOE2(2)                                         <---------ARR14(2)           --------->ANAC58  ------>ZmHOX2a(1)                                   <-----------GT1                --------->ANAC46--------->MYB46(3)                          <---------LBD16--------->ARR14(2)  --------->ARR14(2)------->GAMYB        <---------WRKY18(1)--------->LBD16<------ZmHOX2a(2)  <-----------ARR10<---------MYB52(2) --->ANAC58        --------->GLK1(2) <---------LBD16        <---------GLK1(2) --------->MYB46(3) --->ANAC58 <---------HSFB2a(2)--------->CCA1(2)    --------->HSFB2a(2)   <---------KAN4(2)   taaaccggctagaccgagaagaatcagaccgggatataaaccggatcgcttcttcgaaaaccgattcttcgcaaggaataaccaacggtccttggttagc  6873000                                                                                               ------                                                                   ----------->RAV1(1)         ------                                                                   ------->TEIL                ------                                                                   =======================RAV========                                                                --------->ANAC46          ===========                                                                --------->ANAC58          -------->P                                                                --------->ANAC58       --------->At4g35610                                                            --------->ANAC58          --------->ANAC46                                               <------MYB46(1) ------->TEIL           ===============                                               <------MYB83 --------->ANAC58          ------->GAMYB                <---------At4g35610            <---------MYB46(3) --------->ANAC46   --------->MYB46(3)                <---------ZAT2              <------ZmHOX2a(1)<---------SPL7          ================                --------->At4g35610    --------->ATHB12 <-------TEIL            ------>ZmHOX2a(1)             ------>ZmHOX2a(1)         --------->YAB1   --------->SPL7        =======================            --------->TOE2(3)         <---------YAB1<---------------AtSPL8    ----------->RAV1(2)    ------>MYB46(1)               <---------ANAC58  <---------TOE1(3)     --------->ARR14(2) --------    ------>MYB83--------->ZAT2    <---------ANAC58 <-----------RAV1(2)    <---------ARR14(2)---------  <---------MYB59                 <---------ANAC46 ============================RAV   <------------AtMYB77   aaaaccaaactcttcctcagcttgaaccagaagattgcttatgataggatggttcaggtacgacgcacgcaccacaaatctcctgcaaccgctacccaca  6873100        ------->PIF5        <-------PIF5        ------->MYC3        ------->MYC4        <-------MYC2        <-------MYC3        ------->MYC2       <<<<<<<<<<HY5       <--------ABF1       <<<<<<<<<<AtMYC2       ===========================MYC_MYB       --------->O2       <---------O2       --------->ANAC55(2)       <---------ANAC55(2)       <<<<<<<<<<ABI5       --------->bZIP60(2)                                           --------->bZIP60(1)       --------->TGA1a                      <---------WRKY18(1)      --------->ANAC58       <---------TGA1a                     ----------->HVH21         <---------bZIP60(1)     <------------OsbHLH66            --------->RAP2.6(3)            --------->ANAC55(2)     <---------ALFIN1                --------->MYB52(1)              --------->ANAC46   <-----------HVH21              --------->ANAC58        <---------ZAT18 --->ANAC58                       --------->ANAC58        --------->ZAT18       <------NtERF2 --->ANAC58            --------->TOE1(2)   --------->WRKY12          --------->ANAC58 --->ANAC46           <---------HSFB2a(1)--------->At4g35610         <---------ANAC55(2) ========================RAV     <-------TEIL          <---------At5g28300     --------->LBD16 ================MYC_MYB      <---------DEAR3(2)      --------->MYB52(1)      --------->DEAR3(1) ================MYC_MYB  ----------->HVH21--------->WRKY38(1)     <-----------GT1 ================MYC_MYB  ------->GAMYB--------->MYB46(3)------->GAMYB     --------->DEAR3(1) ====RAV<-------MYC4  --------->HSFB2a(1)<---------At4g35610  <----------DOF2<---------LBD16 --->RAV1(1) <---------HSFB2a(2) --------->ZAT14    --------->ARR11(3)   <---------ATERF1(1) >MYB46(3)   <-----------RAV1(2) <---------ZAT14    <---------ARR11(3)  --------->DEAR3(1)   caaactgccacgtgtccagatggaacatccgacggtacacaacggctgaccgaagataaccgcgctttgttacgccatcgccggagcatttgtctgagtc  6873200             ------>ZmHOX2a(2)            <------ZmHOX2a(2)                        <-------MYC3           <---------ARR11(3)                       --------->TGA1a           --------->ARR11(3)                       <---------TGA1a           ------->TEIL                             <---------O2           --------->ARR14(2)                  <-----------GT1           <---------ARR14(2)         ------>NtERF2<---------TOE1(2)           <---------AGP1            ------>NtERF2 <---------TOE2(2)           <-----------ARR10         --------->LBD16--------->O2        --------->ANAC55(2)          --------->ANAC46------->MYC3           ---------->DOF2         -        <---------ANAC55(2)        <---------LBD16<---------ALFIN1    --------->ZAT6                <        <---------ANAC46          --------->MYB52(1)===================================bZIP_DOF   ---     ----------->HVH21   <-----------GT1      <-----------GT1     <---------MYB52(2)              <--   tcacaatgtgacggatcttgctgcattttacaagacttccggccattttttcccacgtttgaagtcaaactaactctgaaaagttctgaagttatatttt  6873300                                                                                                   --    --------->DAG2                                                                  ------------>CBF<   ---------->DOF2                                                          ----------->GT1      <--- -------->HSFB2a(2)            <------ZmHOX2a(1)                        --------->ZAT14          <--- ---------HSFB2a(2)       --------->ALFIN1                              <---------ZAT14     ------>NtERF2 ------>HSFB2a(2)     <-----------RAV1(2)     --------->ALFIN1  <-----------TBP    <-----------GT1 <- -------HSFB2a(2)   <-----------HVH21<---------GLK1(1)          --------->AHL20(2) --------->YAB1----   ctcgagaaagtgagagaaaatgtttcaggtggaggagggatttgtgaggtttgggagagaccaagtttatatagtgaagagaaaataacaatgccaccag  6873400             --------->ANAC55(2)             --------->ANAC58             <---------ANAC55(2)                     <---------WOX13(1)             --------->ANAC58                       <------------CBF             --------->ANAC46                      --------->ATHB12           <-----------GT1                     --------->ATHB12       <---------AHL20(2)                      --------->ATHB51       --------->AHL20(2)                     <---------YAB1    ----------->GT1                         <---------ICU4                                  <-------TEIL ------->AHL20(2)                           -------->ATHB1             ----------->GT1--------->YAB1 ---------AHL20(2)                          <--------HAHB4            <---------YAB1 <---------YAB1 ------GLK1(2)                              --------->ATHB51          <---------TOE2(3) <---------YAB1 ------ARR11(3)                             --------->YAB1         <---------YAB1  --------->YAB1   - ----------TBP         <----------DOF2     --------->ICU4   <---------AHL20(2) --------->AHL20(2)  <- ----->ARR14(2)  <------------CBF<----------DOF2<------------CBF<---------YAB1 <---------AHL20(2)<---   attttatagttaattacgaaattgtctttctctgtctttctatgaattattattgattgaatttttttgattatggtatatttatttatcatggttcgta  6873500                        --------->DOF5.7(2)                       <----------DOF2                       --------->TOE2(3)                      <---------ANAC58                      <---------ANAC46                      <---------ANAC58                                               <---------ANAC58                  <------------CBF                                                   <---------ANAC58                 --------->ATHB51                                         <-------TEIL                <---------YAB1               ----------->GT1            <---------GLK1(2)              --------->YAB1           <---------TOE2(3)                <---------ARR14(2)             <---------YAB1     --------->ANAC58                        --------->ARR11(1) --------->DOF2 <---------AHL20(2) <----------DOF2                      --------->ARR14(2)        <-- --------AHL20(2)<---------ICU4 --------->ANAC58               ----------->GT1       <---------ANAC46 --------TBP<-----------TBP    ------->TEIL---------->DOF2   <-----------RAV1(2)    <---------TOE2(3)   tttaaagtcttggtttttataattgcgttaatgaacgcattatggaaaagaaaaacttggacctcaggttataagattcgtattttgacgtttgcattca  6873600                                                             --------->ETT(2)                                                      <---------AHL20(2)                                                     <---------ARR11(3)               --------->ANAC58                      --------->AHL20(1)               --------->ANAC46                      <---------AHL20(1)               --------->ANAC58      --------->At5g28300  <---------MYB46(3)             <---------ALFIN1       ----------->GT1  --------->ARR11(3)          <---------REM1(2)    --------->AHL20(2)   --------->CCA1(2)           --------->AHL20(2)          --------->ZAT14  <---------AHL20(2)      --------->ARR11(3)           <---------AHL20(2)          <---------ZAT14 <---------AHL20(2)       <---------ARR11(3)    --------->ANAC58      <-----------GT1     --------->AHL20(2)     --------->ANAC58        --------->ANAC58 --------DOF2--------->ANAC46  <---------AHL20(2)--------->ANAC58      ---------->DOF2   ctttctattgactacacacaccatgttataaatttaaacagtaaaactgacaagatatatttgttgacagaactaaagccatttaaatttgttgacaaaa  6873700  Previous    Next  AGI:  At1g19840.1    Description:  auxin-responsive family protein. similar to auxin-responsive family protein [Arabidopsis thaliana] (TAIR:AT1G75590.1); similar to unknown [Populus trichocarpa] (GB:ABK92492.1); contains InterPro domain Auxin responsive SAUR protein (InterPro:IPR003676) Range:  from: 6872785    to: 6873246    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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