Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         <---------HSFB2a(2)                                                                              --------->ARR11(3)                                                                              <---------ARR11(3)                                                                              <---------GLK1(2)     ------->GAMYB                                                      <------ZmHOX2a(2)           <  ----------->RAV1(1)                           --------->YAB1  <---------ANAC58       --------->HSFB2a(2) ------ZmHOX2a(2)                    --------->GLK1(2)          <---------ANAC58 <-----------GT1   -- ----ZmHOX2a(1)                --------->MYB46(3)   ---------->DOF2   <------ZmHOX2a(1)<---------LBD16   ggatcaacagagacagcaagaatgcaagagataacaaacattctgttccataataaaagtgttttgtcttgaggatcaaagattttcttctcggagactc  6836200         XXXXXXXXXXXXXXXXXXXXX>MIR447C        --------->LBD16   ------>ZmHOX2a(2)  <------ZmHOX2a(2) <---------ARR11(3)                    <---------WOX13(1) --------->ARR14(2)               <---------ANAC46                             <-----------GT1 --------->ARR11(3)            ----------->HVH21                              <-----------GT1   ----- <---------ARR14(2)          ----------->RAV1(2)    ------>ZmHOX2a(2)  ------>ZmHOX2a(2)      ------- <---------AGP1              <---------At4g35610   <------ZmHOX2a(2) --------->ARR14(2) <---------HSFC1(1) --------->AGP1            <---------ALFIN1       <---------MYB52(1) <---------ARR14(2) --------->HSFC1(1) ---------CCA1(2)          --------->REM1(1) <-----------GT1       ----------->HVH21    --------->HSFB2a(2) --------->ARR10         <-----------GT1 --------->ATHB12        ----------->RAV1(2)    <---------HSFB2a(2)   ttagatcttcagggaaaacagctcttgttacacctgatgtgaatgattttccgatcgtttttagaccctctgatccgattttaacaccttctcgaaatga  6836300                                       --------->TOE2(3)                                       --------->TOE1(3)                                      ----------->GT1                                      <---------ANAC46                        ------>ZmHOX2a(1)                                              ----------->HVH21                     ------>ZmHOX2a(1)--------->ANAC55(2)                   --------->LBD16                <----------DOF2       <---------ANAC55(2)                  --------->ANAC46 ---->ARR11(3)---------->ID1--------->ANAC46             <---------YAB1   <---------LBD16          -- -->ICU4  <----------DOF2 <---------ALFIN1 <-----------GT1   ------>ZmHOX2a(2)       --------->At4g35610   ttttgatgtgttctttgtctttcctcctccacgactagttacgttaaacaatccaaaacatgatcgcttcttcattcccgtagcattagatgacattgaa  6836400                                                    <------ZmHOX2a(2)                                                    --------->CCA1(2)                                                   <---------ARR11(3)                                                   --------->AGP1    <---------AHL20(2)                                                   <---------AGP1    --------->AHL20(2)     ------->TEIL                                  --------->ARR11(3)--------->AHL20(1)     --------->ARR14(2)                      <-------TEIL    --------->ARR14(2)     --------->GLK1(2)                   <---------YAB1      <---------ARR11(3)                  ----     <---------ARR11(1)                  <---------TOE2(3)   --------->ARR11(3)                ------     <---------ARR14(2)                 <-----------GT1      <---------ARR14(2)             <--------    <---------CCA1(2)                  --------->YAB1------>ZmHOX2a(2)    <-----------GT1 --------->ATHB12 ------->TOE1(2)            <---------AHL20(2)--------->YAB1 --------->GLK1(2)     ---------->DOF2   accctcgaatctgtatcatctaatctgtattttaagaacaattaacattcatagatctaagaaaatctgaattaattaacaacgtgaaagaaagattgat  6836500                                                          <---------------AtSPL8                                                          --------------->AtSPL8                              <-----------GT1         <---------TOE2(3)                     --------->MYB52(1)         <---------AHL20(1)                <------ZmHOX2a(2) -->ZmHOX2a(2)      <---------SPL7              --------->AHL20(1)   <---------ANAC58 --->ARR11(3)      <---------DAG2               --------->ARR11(3)   <---------ANAC46<---------ANAC55(2) -WOX13(1)---------->ID1  ------->TEIL         <---------CCA1(2)     <---------ANAC58--------->ANAC55(2)   ctcgttgattttgttcttctaccttacgaatttttctctatggccacttatatattgagatttgtacattttcttggagaatggatcacatattgatgag  6836600                                                                                                  ---                                             --------->AHL20(2)                    --------------->AtSPL3                                             <-----------TBP                   <---------------AtSPL8                                         ----------->GT1                 --------------->AGL15<------                                        --------->DAG2                  <-----------------AGL3<------             <------------CBF          ---------->DOF2          --------->TOE2(3)<----------ID1  ----        --------->At4g35610       ----------->GT1           <----------DOF2   --------->MYB52(1)<----  ---------->DOF2               ---------->DOF2  <---------AHL20(2)   --------->ZAT6   ------->TEIL   aaaacaaagtagctaaattgttgtcagaataagagaaagaaaaaagtttatataatgtaagacttttcttaaacactaaataagggacgaacattttcgt  6836700                                                                                        <---------ANAC58    <---------MYB52(1)             <---------DAG2                                       <---------ANAC58   <-------GAMYB                   <----------DOF2                                      <---------ANAC46  <---------MYB46(3)              <---------ANAC58                                     --------->MYB59 ------>DAG2                      <---------ANAC58         --------->AHL20(2)<---------YAB1       <-- ---ANAC58              <----------DOF2         --------->ARR14(2)         --------->YAB1        ---- ---ANAC58           --------->ARR11(3)         <---------ARR14(2)      --------->WOX13(1) <---------ARR14(2) ----->SPL7          <---------ARR11(3)    ---------->DOF2<---------AHL20(2) --------->ICU4<---------ZAT14 -----MYB52(1)   ---------->DOF2<-----------GT1<------ZmHOX2a(1)<-----------HVH21   <------------CBF   aaggtcgttgttttatatgtaaagacctttttttttgctttttggaaaaggatttgataaataatatgtcatatcagtcataatcgaattgggtatacag  6836800              <---------ANAC46                                         --------->WRKY12           --------->ALFIN1                                      <---------WRKY18(1)           <---------ANAC46                                     --------->WRKY12      ----------------->AGL1                                    --------->WRKY38(1)<---------YAB1    <---------ZAT18                                           <------------CBF<-----------GT1   <---------RAP2.6(2)                  <-----------GT1      >>>>>>>>>EIN3 <----------DOF2 ---------RAV1(1)             --------->TOE2(2)<-----------RAV1(1) >>>>>>>>>>>>WRKY18         <------ ----->ARR11(3)    <-------TEIL <---------TOE2(2)     <----------DOF2<------------CBF      <---------WRKY18(1)   atgttgtggccttgtgggggatgcatcaaaaacctatgttttaaactctatgtggtcttttatacattgaccattgacttttactatgcttcttgaccca  6836900                                                        --------->MYB52(1)                                                     --------->ANAC55(1)                                                     --------->ANAC58                                                     --------->ANAC46                                                     --------->ANAC58                                                     --------->ANAC55(2)                                                     <---------ANAC55(2)                                               <---------AHL20(2)                                               --------->AHL20(2)                                            --------->ATHB51                                            <--------HAHB4                                         <-                                            <---------ICU4                                        ---                                            -------->HAHB4                                     <-----                                            --------->YAB1                                 --------->DEAR3(1)                                           --------->AHL20(2)                              ------->GAMYB                                           --------->ICU4                                  --------->RAP2.6(2)                                           <---------ATHB51                               --------->MYB46(3)      ------>ZmHOX2a(1)     <---------ALFIN1<--------ATHB1       <----------DOF2          --------->DEAR3(2)      <----------DOF2    <-----------GT1   <---------ATHB12     <---------ANAC58        --------->ARR14(2)  <-----------GT1    <---------ICU4        <---------YAB1 <------------MYB.PH3(1)       --------->MYB52(1) <---------CCA1(2)--------->YAB1         --------->YAB1 <-----------GT1                 <---------ARR14(2) ---MYB59       ----------->RAV1(1)   --------------->AGL15     <---------ANAC58        <---------ALFIN1   attgtatccttttatttccaacataatttcccacatttttctctaataattaaacaagtaactgtttctttccatttttcaaaatttgccaaaccgcctt  6837000         <---------ICU4         <---------AHL20(2)         --------->AHL20(2)        <---------YAB1        --------->ICU4     <---------AHL20(2)                         <---------DAG2     --------->AHL20(2)                         <----------DOF2     <---------YAB1                           ------>MYB83   --------->CCA1(2)                          ------>MYB46(1)  --------->ARR11(3)                        <---------MYB111(2)                                   ---  <---------ARR11(3)                        <---------MYB46(2)                    ---------->DOF2<--- --------TOE2(3)                            <---------MYB111(1)       --------->DAG2    <---------HSFB2a(1) ------->DOF2          <----------DOF2  <---------ZAT18    <-----------GT1    <----------DOF2    ---- -----DOF2  <-----------GT1     <---------AHL20(2)  <-----------GT1  --------->ICU4     --------->HSFB2a(1)   taaagatataattaataccatttttctttagtattttttttgtccacctactttttactagttactaggcaaaaattggtctttaaaagaaaattctaaa  6837100  Previous    Next  AGI:  At1g19780.1    Description:  ATCNGC8 (CYCLIC NUCLEOTIDE GATED CHANNEL 8); calmodulin binding / cyclic nucleotide binding / ion channel. Identical to Putative cyclic nucleotide-gated ion channel 8 (CNGC8) [Arabidopsis Thaliana] (GB:Q9FXH6); similar to ATCNGC7 (CYCLIC NUCLEOTIDE GATED CHANNEL 7), calmodulin binding / cyclic nucleotide binding / ion channel [Arabidopsis thaliana] (TAIR:AT1G15990.1); similar to ATCNGC9 (CYCLIC NUCLEOTIDE GATED CHANNEL 9), calmodulin binding / cyclic nucleotide binding / ion channel [Arabidopsis thaliana] (TAIR:AT4G30560.1); similar to ATCNGC6 (CYCLIC NUCLEOTIDE GATED CHANNEL 6), calmodulin binding [Arabidopsis thaliana] (TAIR:AT2G23980.1); Range:  from: 6833876    to: 6836569    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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