Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   <---------AHL20(2) -------ICU4 ------AHL20(2) ----->AHL20(2)                                                               --------->ATHB12 -----AHL20(2)                                                               <---------AHL20(1) --AHL20(2)                                                       ----------->GT1 --AHL20(1)                                             ----------->GT1      <---------AHL20(2) --ARR11(3)               <----------DOF2             <---------ANAC58       --------->AHL20(1) ->AHL20(1)     --------->LBD16   <---------AHL20(2)  <---------ANAC58       --------->AHL20(2) ->AHL20(2)    --------->ANAC46  --------->AHL20(2)   <---------ANAC46---------->DOF2        <------- ->ARR11(3) <---------ARR14(2) --------->YAB1--------->ANAC58    --------->DAG2          <-------TEIL >AHL20(2)  --------->ARR14(2)<---------YAB1 --------->ANAC58   ---------->DOF2     ----------->RAV1(1)   taattacatggatatatccgaaaaaaaactttataataaatagccacaagttatggccgtgtaacaaaaagtaaaagaatttattgccacatacattgtt  6814400                                                                                               ------                                                                                               ------                                                                                    <---------ICU4                                                                                    <--------HAHB4                                                                                 --------------->AGL15                                                                                 <---------------AGL15                                                                                ----------------->AGL3                                                                                ----------------->AGL2                                                                        <---------ICU4       <-------                     XXXXXXXXXXXXXXXXXXX>MIR172B*                      <---------YAB1  --------->YAB1                  --------->YAB1                                       --------->ICU4 <---------YAB1                 <------ZmHOX2a(2)               --------->YAB1      --------->YAB1 --------->ATHB12                --------->ARR14(2)               --------->AHL20(2)  <---------ICU4<---------YAB1    <---------ARR14(2)           <-------TEIL    <---------AHL20(2) --------->ICU4 --------->ICU4    --------->ARR14(2)  --------->ZAT6        --------->TOE2(3)     <---------ATHB12--------->ATHB51 ----RAV1(1)    <---------ARR14(2)  <---------YAB1             ------>ZmHOX2a(2)<-----------------AGL3   ggaccatatatgaagacggatcatcaccactaaaattcatgtttgtaacatttatattctatggatcgaaatcattatgctctccattattagaaccaaa  6814500     ------>MYB46(1)     ------>MYB83   <---------MYB59                         <---------ANAC58                                      <---   --------->AtMYB61                       <---------ANAC58                                      ---- >MYB46(1)                                <---------ZAT2              <-----------GT1           <---- >MYB83                       --------->GLK1(2)--------->At4g35610 --------->AHL20(2)         ------- --MYB59             --------->At4g35610  --------->ZAT2    ---------->DOF2                  <-------   caaaaccaaaccaaaattgtatcagcaaaactaatctgaagcctagcttagcttaagaaaaaaaaagaattaaaaccatatagtatgcattaactatcat  6814600                                                                                             --------                                                                                  <---------ZAT2                                                                                  --------->ZAT2-----                                                                                  <---------At4g35610                                                                               --------->ATERF1(1)                                                                               <---------ANAC58 -----                                                                               <---------ANAC58------                                                                              <---------ATERF1(1)<--- ------ICU4                                                                   ------>NtERF2--------->ANAC58 ----->YAB1                            ---------->DOF2            <---------ARR14(2)     --------->MYB52(1) -----YAB1                  --------->ARR14(2)       --------->ICU4          ------>NtERF2 --------->ANAC58 -->YAB1                    <---------ARR14(2)  --------->YAB1    --------->ARR14(2)  ----------->ARR10 --YAB1            <----------DOF2 <----------DOF2<---------YAB1 <------ZmHOX2a(1)--------->At4g35610   cataactagtttagttttaggcttttagcaaataggccttttaaagcccattataaatatgaagagaggattccatcgggggcctgctgagaaacggcaa  6814700                                                           --------->ATHB12                                                          --------->ICU4                              <------------CBF         --------->ZAT6 ---->CBF                <---------ANAC46             <---------ZAT14           <---------AHL20(2) ---->ANAC58             ----------->GT1            <---------WRKY38(1)        --------->AHL20(2) ---->ANAC58             <---------ANAC58    ---------->DOF2         <---------DAG2 --->WOX13(1)            <---------ANAC58 <---------HSFB2a(2)        <----------DOF2 ------ATHB12       --------->MYB52(1)    --------->HSFB2a(2)    <---------RAP2.6(2)*TSS  ------>ZmHOX2a(1)   tcaacttccttctaaataacaaaaacggcgtgaattgcaaacttctgcaaagagtcaacactgattagcggcttttccccattaaatctctcctctaaac  6814800                                           <---------HSFB2a(1)                                     =======================HOX2a_HOX2a                                     ------>ZmHOX2a(1)                                    --------->TOE2(3)                                   ------>ZmHOX2a(2)                                  <------ZmHOX2a(2)                                 --------->ARR14(2)                                 <---------ARR11(3)                                 <---------GLK1(2)                                 --------->ARR11(3)                                 <---------ARR14(2)                                 --------->AGP1                           <---------bZIP60(1)                           <---------ETT(2)--------->HSFB2a(1)     --------->REM1(2)                           --------->bZIP60(1)       ================================HOX2a_HOX2a                        ----------->HVH21  --------->HSFC1(2) <---------At5g28300                        ----------->TGA1 ---------->DOF2  <---------MYB46(3)               <---------At4g35610                   <-----------HVH21--------->TOE1(3)<------ZmHOX2a(2)    --------->TOE1(2)--------->At4g35610            <----------DOF2--------->ETT(2)<---------HSFC1(2)<-----------GT1  <------ZmHOX2a(1)   ttcttcgttccaagctttctccatcactgacgacagatccttagaaagttctgagatcgattgttactgtgtaaaccctaggatgtgattctaagctgta  6814900                                                                 <---------YAB1                                                               --------->YAB1                     ===                                                              <---------ATHB12                    <--              --------->ANAC58                       --------->CCA1(2)                      ---------              --------->ANAC58      ----------->RAV1(1)     <---------At4g35610  <-----------GT1  ===   gagagaaacaatggcgaagccatcaacgagtatgtgggcaacattgcagaagaagagatggccactgatgattctattggttttatctgtatcaacagta  6815000                               <---------ZAT14                               --------->ZAT14                       <---------YAB1                ------>ZmHOX2a(2)                =====================HOX2a_HOX2a               ======================HOX2a_HOX2a              --------->ARR11(3)                                                                    <              <---------ARR14(2)                                                        <------ZmHOX2a(2)              --------->ARR14(2)                                                        =============              --------->AGP1  ------>ZmHOX2a(1)                                         --------->CCA1(2)   <---------GLK1(2)<----------DOF2                                                    <---------ARR14(2) --------->ICU4--------->CCA1(2)                                                       <---------ARR11(3) ======================HOX2a_HOX2a          ---------->DOF2                            --------->AGP1 ----ZmHOX2a(1)<------ZmHOX2a(2)         <---------ZAT6                                --------->ARR11(3) >ZAT6        <---------ARR11(3)       --------->MYB52(2)                              --------->ARR14(2) =====================HOX2a_HOX2a  <---------ZAT6  <---------REM1(1)    --------->MYB52(1)   <-------   ggaatgattctcgtgagatctacttttgattcctgtagtgttagtggaaagagatgtagccgagagaaggaagataacagtgacattaagatccaatcgg  6815100            <---------ARR14(2)       <-------GAMYB      <---------MYB46(3)      ------>ZmHOX2a(2)      =================HOX2a_HOX2a    --------->ARR14(2) --------->HSFB2a(2)                                                                      ------>ZmHOX2a(2) <---------HSFB2a(2)    <-------TEIL           <---------ANAC58           <---------At4g35610 ---------LBD16 ------>ZmHOX2a(1)              <---------ANAC58         <-----------RAV1(2) <-------- ======================HOX2a_HOX2a           <-----------GT1         <----------DOF2  <---------YAB1 --ATHB12   --------->ARR14(2)    ---------->DOF2            ------->TEIL --------->At4g35610  <-----   tttctggatcgttgaatcctctcgagttcatgaaatcaaagctcgttttacttgtttctcatgaactctcgctctcaggtgatgttttgtgatcgtgtta  6815200                                                                                      <------ZmHOX2a(1)                                                                                      ===============                                                                               <---------ANAC58                                                          <---------YAB1       <---------ANAC58                                                         --------->TOE2(3)     <---------ANAC46                                                ------->TEIL              <---------ARR14(2)                                             --------->ALFIN1             --------->ARR14(2)          <---------ARR11(3)               <---------ANAC46             <----------DOF2          --------->GLK1(2)               <---------TOE2(3)            <---------ANAC58 -ZAT6   <---------GLK1(2)         --------->ICU4       <---------ZAT6 <---------ANAC58 ------GT1--------->ARR11(3)       <---------YAB1  <----------DOF2     <---------ANAC46      ------->TEIL   ctctcttgtcaaaatctctatggctaaacttgaagtgatgattttaggtggacctttattgttaatggaattggcgtttttgcttagaggagttgaatct  6815300  Previous    Next  AGI:  At1g19710.1    Description:  glycosyl transferase family 1 protein. similar to glycosyl transferase family 1 protein [Arabidopsis thaliana] (TAIR:AT1G75420.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73426.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61097.1); contains InterPro domain Glycosyl transferase, group 1; (InterPro:IPR001296) Range:  from: 6814784    to: 6816867    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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