Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <------NtERF2      ------>NtERF2     --------->RAP2.6(2)     --------->RAP2.3(2)     --------->RAP2.3(3)     --------->ANAC46     --------->ATERF1(2)     --------->DREB2C(2)     --------->DEAR3(1)     <---------ATERF1(2)     --------->RRTF1(2)     --------->RRTF1(3)        ---------->DOF2                  ------>ZmHOX2a(1)    --------->RAP2.3(1)       <---------AHL20(2)               --------->TOE1(2)    --------->ERF1            --------->AHL20(2)               --------->TOE2(2)    --------->ORA47(2)       <---------YAB1     <---------ARR11(3)   <---------RAP2.3(1)   <---------ARR11(3)     --------->ARR11(3)     <----------DOF2 -->ZmHOX2a(1)     <-----------GT1      <---------ANAC46    ------->TEIL                    <--------   tctatcgccgccatttgtattaaactagataattaaagagttgtgttgaagatttatgtatgaatccttcgaactttagctagttgttttgtatttatag  6805000                                   *TSS                                <---------YAB1                               <---------AHL20(1)                               --------->AHL20(2)                               <---------AHL20(2)                              --------->YAB1                                 --------->AHL20(2)  <---                           --------->YAB1<---------MYB46(3)       --------->YAB1 <---------AHL20(2)                          <-------TEIL<-----------RAV1(1)      <---------TOE1(2) --------->AHL20(2) -AHL20(2)    <-----------GT1<---------YAB1         <---------GLK1(2)<-----------GT1             ----   ggggagaatgttgatttttcttatccgattcattataattctgtggttctctcggcttctcatcgtagttataacaaaatgaattaaatactttcgaaaa  6805100                                                          <-------GAMYB                                                         --------->MYB46(2)                                                         --------->MYB52(2)                                                         --------->MYB111(2)                                                         --------->MYB111(1)                                                         <---------MYB46(3)                                                      ------------>MYB.PH3(2)                                                <---------YAB1                                              -------->ATHB1               <---------ANAC58               --------->ATHB51                              <--------               <---------ANAC46  --------->ALFIN1<-----------GT1                       --------->YAB1               <---------ANAC58 <-------MYC2  <---------ICU4                          <---------YAB1              <------NtERF2     <-------MYC3 <---------ATHB51<------MYB83            <-----------GT1     <-------TEIL      ---------->DOF2       --------->ICU4  <------MYB46(1)        --------->YAB1 -------ID1--------->At4g35610  ------->MYC2 <---------AHL20(2)                  ------->TEIL ------->GT1<---------DEAR3(1)  ------->MYC3 --------->AHL20(2)               --------->AtLEC2 ------   cgataaatgcatgggctgcgtaaacaaaagagcatgtgttgattcaaattattacaagttagttggtatacaattactccatgcatttatcattttcgga  6805200                  --------->LBD16                 --------->LBD16                --------->HSFB2a(2)                <---------HSFB2a(2)     --------->AHL20(2)                                                   <---------AHL20(2)     <---------AHL20(2)                                                  <---------AHL20(1)    --------->AHL20(2)                                                   --------->AHL20(2)    <---------AHL20(2)                                                   --------->AHL20(1)    <---------AHL20(1)                                                --------->AHL20(2) -LBD16        <---------LBD16                                      --------->AHL20(2)     <------ZmHOX2a(1) --------->AtSPL8--------->ANAC46                       --------------->AtSPL8--------->YAB1    -----   gtacaatttaattcgtttcccgaaaacgatgtgtccataaacacataccaagacttactaagtactactaaaaaatataatcaaattgcattaggaaaca  6805300                                                                                                 ----                                                                                                -----                                                                 <---------ANAC55(2)      <----------                                                                 ----------->GT1        >>>>>>>>>>WRKY43                                                          <------------CBF              >>>>>>>>>>WRKY38         ----------->GT1                                --------->AHL20(1)              >>>>>>>>>>WRKY26         <---------MYB46(3)             ----------->GT1 --------->AHL20(2)           <------------CBF     <---------YAB1                <---------MYB46(3)   <---------AHL20(2)     <----------ID1  ------ ---->ARR11(3)                 <---------YAB1          --------->AHL20(2)  ---------->DOF2-----------   tattgttatgtttgttaaaaaaaacattttgttatgtttgttcagtaaaaaaaaaaaaaaaattgttatgtaaaaaaaaaagaaacaaattgaccaaaaa  6805400                                                                       --------->ALFIN1                                                                     ================================                                                                     <---------ANAC58                                                                     <---------TGA1a                                                                     >>>>>>>>>>HY5                  -                                                                     --------->TGA1a                -                                                                     --------->bZIP60(1)          ---                                                                     ================================                                                                     --------->O2                 ---                                                                     <---------ANAC55(2)          ---                                                                     --------->ANAC55(2)         ----                                                                     <---------bZIP60(2)         <---                                                                     <---------bZIP60(1)         ----                                                                     <---------ANAC55(1)       ------                                                                     <---------ANAC46          <-----                                                                     <---------ANAC58          <-----                                                                     <---------O2             -------                                                                    <-----------------------TaNAC69(2)                                                                    ----------->bZIP910(1)    -------                                                                    ----------->bZIP911(1)    -------       >>>>>>>>>>WRKY26                                             ----------->STF1         ------->TEIL       >>>>>>>>>>WRKY43                                            <---------TGA2(2)        <--------       >>>>>>>>>>WRKY38                                           ----------->TGA1        --------->ANAC58 ------->GT1                                                      ----------->HVH21       --------->ANAC58 ---->DAG2                                       ==============================bZIP_DOF----------->HVH21 -----AGL15                               ------------------------>ANAC81          ----------->RAV1(2) ---->DOF2                    --------->ANAC58   ---------->DOF2 <-----------HVH21 <---------ANAC58<- ------>AGL1                  --------->ANAC58  *TSS        <------ZmHOX2a(1)      <---------ANAC58--   agtaaaatttgaccaaaaacaaatagtagcacaagaaaaacagagaacagaaaaagaagagaggaagggtgacgtggcacaatttccctgcgacgcaccc  6805500     <---------CCA1(2) =======MYC_MYB -------->TOE2(2)                     <---------MYB52(1)                             --------->ARR14(2) ------>GAMYB                        <-----------HVH21                               <---------ARR11(1) --->MYB83                  ------>NtERF2                                            ------->TEIL ======MYC_MYB              <------NtERF2                                          --------->LBD16 --->MYB46(1)              --------->RAP2.6(2)                                     <------NtERF2 ----->P                   ------>NtERF2                                          --------->RRTF1(2) -->MYB46(1)              --------->DEAR3(1)                                      --------->DEAR3(1) ------ALFIN1             <---------RAP2.6(2)                                     --------->RAP2.6(2) -->MYB83                 <---------DEAR3(1)                                      --------->RAP2.3(2) --->MYB46(3)             <---------ATERF1(2)                                   ------>NtERF2 ----MYB52(2)             --------->ATERF1(2)                                  --------->ANAC46 ----MYB55(2)            --------->At4g35610                                  <---------LBD16 -->ANAC46               --------->ATERF1(1)                               <---------GLK1(1) -->ANAC58             ------>ZmHOX2a(2)                             --------->ARR14(2) -->ANAC58             <---------DEAR3(1)                        <---------MYB52(1)------>NtERF2 -ALFIN1              <------ZmHOX2a(2)                        <---------MYB46(3)--------->RAP2.3(1) --------MYB55(2)    <---------ARR14(2)                      <---------At4g35610--------->LBD16 ------->MYB46(3)    --------->ARR14(2)           <---------GLK1(1)  <---------ARR14(2)   aacctccgtctctctctctctcagatcggcggccatctccgtcgagtaattgaaatctctctcagccgttggattcgaattccgccgcatcttcatatac  6805600                                                      <---------ARR14(2)                                                      --------->ARR14(2)                            <               --------->ARR14(2)                   --------->LBD16                       <---------MYB52(1)               <---------ARR14(2)                  --------->LBD16                      <---------ANAC58             --------->LBD16                      --------->LBD16                       <---------ANAC58            --------->ANAC46                      <---------LBD16               <----------DOF2     -           <---------LBD16                       <---------LBD16                --------->TOE2(3)  <-          ------>ZmHOX2a(1)                    --------->MYB46(3)            <---------AHL20(2)   <--         --------->TOE2(2)                    ------->TEIL                   <-----------GT1     ----   ctcgtttcaatcctgcggaaccctagttgctctggtgagtccctggtgaacccccggattttagaatcatctattgtatttactttaattccgttccatt  6805700                                                 --------->YAB1                                               <---------AHL20(1)          <---------MYB52(1)                   --------->AHL20(2)  <---------GLK1(1)                            <---------AHL20(2) ---------ICU4--------->ARR11(3)              --------->YAB1 -------->ATHB12                 <---------ALFIN1<---------ICU4 --------YAB1 <---------GLK1(2)  --------->REM1(1)       <---------YAB1       <---------MYB52(1) -------TOE2(3)             ------>NtERF2    <---------YAB1                 <---------YAB1 ----->YAB1 ----------->ARR10  <-----------HVH21<---------YAB1           --------->GLK1(2)        <--   gatgatttctgcgttagattttgaggtctctgccttcacctctatgtattataatggctctgattcgaagttcacattctgtttgtttatatgcagaatt  6805800                                                  <---------ATHB12                                            --------->AtMYB61                                            --------->DEAR3(1)                                            <---------ALFIN1                   --------->At4g35610            --------->YAB1   <--------P    --------->MYB46(3)                  <---------At4g35610           <---------YAB1  <---------MYB46(3)  --------->AtMYB61            ---------->DOF2 <------ZmHOX2a(1) <---------ANAC58     <---------ZAT14  --------->ANAC58                 --------->YAB1    <---------TOE2(3) <---------ANAC58 <---------ARR11(3)   --------->ANAC58                 <---------ICU4    <---------TOE1(3) -------TOE2(3)   --------->ARR11(3) <------ZmHOX2a(1)                 <-------TEIL  <----------DOF2   gtggtttgctactgtgataagttcttcagtggtagattaggaagcaccaccaatggagattgtgtaagacatattcattacagctctcttttaaggatta  6805900  Previous    Next  AGI:  At1g19670.1    Description:  ATCLH1 (CORONATINE-INDUCED PROTEIN 1). Identical to Chlorophyllase-1 (CLH1) [Arabidopsis Thaliana] (GB:O22527); similar to ATCLH2 (Chlorophyll-chlorophyllido hydrolase 2) [Arabidopsis thaliana] (TAIR:AT5G43860.1); similar to chlorophyllase 1 [Brassica oleracea] (GB:AAN51933.1); contains InterPro domain Chlorophyllase, chloroplast (InterPro:IPR017395); contains InterPro domain Chlorophyllase; (InterPro:IPR010821) Range:  from: 6803602    to: 6805035    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g19680.1    Description:  protein binding / zinc ion binding. similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G75400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61102.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 6805448    to: 6807853    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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