Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   --------->WOX13(1)                           --------->ANAC55(1)                           --------->ANAC58                           --------->ANAC55(2)                           --------->ANAC46     <---------TOE2(3)                           <---------ANAC55(2)  <---------------AtSPL8            --------->MYB52(1)                     <----------DOF2          <---------AHL20(2)               <---------ANAC55(2)                  --------->ARR11(3)          --------->AHL20(2)             <-----------GT1                  <---------ARR11(3) --------->WOX13(1)                 <---------ANAC55(2)      --------->AHL20(2)   --------->O2 --------->YAB1                  <---------ANAC55(1)        --      <---------AHL20(2)   --------->ANAC58  <---------ATHB12           --------->ANAC55(2)     <----     --------->AHL20(2)  <-----------GT1--------->TOE2(3)      <-----------GT1 --------->ANAC55(2) <- ->WOX13(1)      <---------CCA1(2) <---------ATHB12 <-------TEIL      <-----------GT1           ----- -HVH21   --------->AHL20(2)    --------->MYB46(3)  ------->TEIL    <-----------HVH21 <---------MYB52(1)   aagaatataaaattaacttatatcttttcacgtaacaatcaatctcaattaatgtacattttgttttacatgttacatgttacataccgtaagttatcct  6804600                <---------YAB1              <---------ICU4              --------->ATHB51              --------->AHL20(2)              <---------AHL20(2)             <---------YAB1           <--------HAHB4          --------->ICU4          <---------YAB1        --------->YAB1       <-------TEIL    -------->HAHB4                          --------->ALFIN1    --------->ATHB12                   ------->TEIL                                      <-----------HVH21   <---------ATHB12                 --------->ANAC55(2)                                 --------->ANAC58 ------->AHL20(2)                   <---------ANAC55(2)                         <-------GAMYB ------DOF2<---------ICU4     --------->AHL20(2)                               <---------MYB46(3) --------AHL20(2)         ----------->GT1 <-----------RAV1(1)     --------->AtLEC2      --------->ANAC58 ->ZmHOX2a(1)--------->ICU4  <---------AHL20(2)<---------PCF2<-----------GT1   ----------->GT1   tttaaatgattcataattattttttgtatagttaaattatgtacctgtggggctacaagaatgtaaccatgcgaagcgatgtggttaagaacgtcagagt  6804700                                                           <-------GAMYB                                                          <---------MYB46(3)                                                          ===================RAV                                                          <-----------RAV1(1)                                                       ------>NtERF2                           <-----                                                      --------->DEAR3(1)                    ---------                                                    ------>NtERF2                          --------->ALFIN1                  --------->ANAC58                  --------->LBD16                       <------NtERF2                  --------->ANAC46                 <---------ANAC46               <---------ARR14(2)                  --------->ANAC58                <---------LBD16  ----------->GT1--------->ARR14(2)                ---------->DOF2                 --------->ARR14(2) --------->ANAC55(2)   <---------ORA47(2)              --------->CCA1(2)                 <---------ARR14(2) <---------At4g35610  <---------DREB2C(2)        <---------ANAC46              <---------LBD16 ----------->HVH21       <-----------------AGL1   --------->MYB111(1) --------->AtLEC2       ----------->ARR10  <-----------RAV1(2)    <---------DEAR3(1)   agaagtagttgcgaagataaaagccatggaagaataaaacgacgggataagttccggcgactgttggacaggtgattctcaccggttttggcggtgctgt  6804800                         <---------ARR14(2)                         --------->ARR14(2)                        <---------CCA1(2)                               ----------->RAV1(1)                       <---------MYB52(1)                       --------->LBD16                   --------->MYB52(1)                          --------->DEAR3(1)                  <---------ALFIN1                            --------->RAP2.3(1)               --------->ARR14(2)               <---------CCA1(2)<------NtERF2               <---------TCP16(1)         <---------At4g35610 <---------LBD16               <---------ARR14(2)         --------->At4g35610 --------->ATERF1(1)               <---------TCP20            --------->ATERF1(1) <------NtERF2              <---------ARR14(1)         <---------ATERF1(1) <---------ATERF1(1)  <--------HAHB4 <---------ABI4(2)    <------NtERF2          ------>NtERF2  <---------ICU4 --------->MYB46(3) --------->ETT(1)        --------->RAP2.3(2)  --------->YAB1<------ZmHOX2a(2)   <---------ANAC46        --------->DEAR3(1) <---------ATHB12------>ZmHOX2a(2)  <---------LBD16    ---------->DOF2 ----------------->AGL1 --GAMYB     --------->LBD16     <---------MYB46(3)--------->TOE2(3) <-----------GT1 --------->TOE1(2) >ABI4(2)  <---------LBD16     <-------GAMYB ------>NtERF2 --------->RAP2.3(1) <------ZmHOX2a(1) ----   tgaatcattttccaccggatccaccggtatctcggttgtcgggaggctgcctatctcaaaagccgccggagttaccacagaggaaaacgttggactgtcc  6804900       <------NtERF2      ------>NtERF2     --------->ANAC46     <---------ATERF1(2)     --------->ATERF1(2)     --------->RAP2.6(2)     --------->RAP2.3(2)     --------->DEAR3(1)     --------->RAP2.3(3)     --------->RRTF1(3)     --------->RRTF1(2)     --------->DREB2C(2)       ---------->DOF2                  ------>ZmHOX2a(1)    --------->RAP2.3(1)       <---------AHL20(2)               --------->TOE1(2)    --------->ERF1            --------->AHL20(2)               --------->TOE2(2)    --------->ORA47(2)       <---------YAB1     --------->ARR11(3)   <---------RAP2.3(1)   <---------ARR11(3)     <---------ARR11(3)     <----------DOF2 -->ZmHOX2a(1)     <-----------GT1      <---------ANAC46    ------->TEIL                    <--------   tctatcgccgccatttgtattaaactagataattaaagagttgtgttgaagatttatgtatgaatccttcgaactttagctagttgttttgtatttatag  6805000                                   *TSS                                <---------YAB1                               <---------AHL20(2)                               --------->AHL20(2)                               <---------AHL20(1)                              --------->YAB1                                 --------->AHL20(2)  <---                           --------->YAB1<---------MYB46(3)       --------->YAB1 --------->AHL20(2)                          <-------TEIL<-----------RAV1(1)      <---------TOE1(2) <---------AHL20(2) -AHL20(2)    <-----------GT1<---------YAB1         <---------GLK1(2)<-----------GT1             ----   ggggagaatgttgatttttcttatccgattcattataattctgtggttctctcggcttctcatcgtagttataacaaaatgaattaaatactttcgaaaa  6805100                                                          <-------GAMYB                                                         --------->MYB52(2)                                                         --------->MYB111(1)                                                         --------->MYB46(2)                                                         <---------MYB46(3)                                                         --------->MYB111(2)                                                      ------------>MYB.PH3(2)                                                <---------YAB1                                              <---------ICU4               <---------ANAC58               -------->ATHB1                                <--------               <---------ANAC58  --------->ALFIN1<-----------GT1                       --------->YAB1               <---------ANAC46 <-------MYC3  --------->ATHB51                        <---------YAB1              <------NtERF2     ------->MYC3 <---------AHL20(2)                      <-----------GT1     <-------TEIL      ---------->DOF2       --------->AHL20(2)                     --------->YAB1 -------ID1--------->At4g35610  <-------MYC2 <---------ATHB51<------MYB46(1)     ------->TEIL ------->GT1<---------DEAR3(1)  ------->MYC2 --------->ICU4  <------MYB83     --------->AtLEC2 ------   cgataaatgcatgggctgcgtaaacaaaagagcatgtgttgattcaaattattacaagttagttggtatacaattactccatgcatttatcattttcgga  6805200                  --------->LBD16                 --------->ANAC46                <---------HSFB2a(2)                --------->HSFB2a(2)     <---------AHL20(2)                                                   <---------AHL20(2)     --------->AHL20(2)                                                  <---------AHL20(1)    <---------AHL20(2)                                                   --------->AHL20(2)    --------->AHL20(2)                                                   --------->AHL20(1)    <---------AHL20(1)                                                --------->AHL20(2) -LBD16        <---------LBD16                                      --------->AHL20(2)     <------ZmHOX2a(1) --------->AtSPL8--------->LBD16                        --------------->AtSPL8--------->YAB1    -----   gtacaatttaattcgtttcccgaaaacgatgtgtccataaacacataccaagacttactaagtactactaaaaaatataatcaaattgcattaggaaaca  6805300                                                                                                 ----                                                                                                -----                                                                 ----------->GT1          -----------                                                                 <---------ANAC55(2)    >>>>>>>>>>WRKY26                                                          <------------CBF              >>>>>>>>>>WRKY38         <---------MYB46(3)                             --------->AHL20(1)              >>>>>>>>>>WRKY43         ----------->GT1                ----------->GT1 --------->AHL20(2)           <------------CBF     <---------YAB1                <---------MYB46(3)   <---------AHL20(2)     <----------ID1  ------ ---->ARR11(3)                 <---------YAB1          --------->AHL20(2)  ---------->DOF2<----------   tattgttatgtttgttaaaaaaaacattttgttatgtttgttcagtaaaaaaaaaaaaaaaattgttatgtaaaaaaaaaagaaacaaattgaccaaaaa  6805400                                                                       --------->ALFIN1                                                                     <---------ANAC55(2)                                                                     <---------ANAC58                                                                     <---------ANAC46               -                                                                     ================================                                                                     --------->ANAC55(2)            -                                                                     ================================                                                                     <---------ANAC58             ---                                                                     <---------ANAC55(1)          ---                                                                     <---------TGA1a              ---                                                                     --------->bZIP60(1)         ----                                                                     <---------bZIP60(1)         ----                                                                     <---------bZIP60(2)         <---                                                                     --------->TGA1a           <-----                                                                     <---------O2              <-----                                                                     >>>>>>>>>>HY5             ------                                                                     --------->O2             -------                                                                    ----------->bZIP910(1)    -------                                                                    ----------->bZIP911(1)    -------                                                                    ----------->STF1         ------->TEIL       >>>>>>>>>>WRKY43                                             <-----------------------TaNAC69(2)       >>>>>>>>>>WRKY38                                            <---------TGA2(2)        <--------       >>>>>>>>>>WRKY26                                           ----------->TGA1        --------->ANAC58 ------->GT1                                                      ----------->HVH21       --------->ANAC58 ---->DAG2                                       ==============================bZIP_DOF----------->HVH21 ------>AGL1                              ------------------------>ANAC81          ----------->RAV1(2) ---->DOF2                    --------->ANAC58   ---------->DOF2 <-----------HVH21 <---------ANAC58<- -----AGL15                   --------->ANAC58  *TSS        <------ZmHOX2a(1)      <---------ANAC58--   agtaaaatttgaccaaaaacaaatagtagcacaagaaaaacagagaacagaaaaagaagagaggaagggtgacgtggcacaatttccctgcgacgcaccc  6805500  Previous    Next  AGI:  At1g19670.1    Description:  ATCLH1 (CORONATINE-INDUCED PROTEIN 1). Identical to Chlorophyllase-1 (CLH1) [Arabidopsis Thaliana] (GB:O22527); similar to ATCLH2 (Chlorophyll-chlorophyllido hydrolase 2) [Arabidopsis thaliana] (TAIR:AT5G43860.1); similar to chlorophyllase 1 [Brassica oleracea] (GB:AAN51933.1); contains InterPro domain Chlorophyllase, chloroplast (InterPro:IPR017395); contains InterPro domain Chlorophyllase; (InterPro:IPR010821) Range:  from: 6803602    to: 6805035    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g19680.1    Description:  protein binding / zinc ion binding. similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G75400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61102.1); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 6805448    to: 6807853    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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