Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <---------GLK1(1)                       --------->HSFB2a(1)                       <---------HSFC1(2)                       --------->HSFC1(2)                                            --------->MYB52(1)                       <---------HSFB2a(1)                              --------->TOE1(2)                      --------->ARR14(2)                    =======================RAV  ----------->GT1                    --------->LBD16             <----------DOF2         --------->TOE2(2)                   --------->ANAC46          <-----------GT1<-----------RAV1(1) <----------ID1    --- -->AtMYB61      ------>ZmHOX2a(1)       <----------DOF2<---------YAB1 ----------->RAV1(2)   --------   ttctagttttcttctcatcctccgaaacttcgaaatctgacttcttttctcttttctcaccattgttggagaaacctgagagaagacaaacagaaaaaaa  6799400                           <--------P                        <---------HSFB2a(2)                        --------->HSFB2a(2)      --------->MYB52(1)      ----------------->AG              <---------ANAC55(2)         <---------YAB1                 ----------------->AGL1         --------->YAB1<---------ANAC46   <---------TOE2(3)          --------->HSFB2a(1)           <-        <---------YAB1<---------LBD16     <---------HSFB2a(2)        --------->HSFC1(2)           --- -------->GT1 --------->ANAC55(2)      <---------AHL20(2)            <---------HSFC1(2)         <---- ->AHL20(2) --------->MYB52(1)    --------->TOE2(3)--------->ZAT6    <---------HSFB2a(1)        <----   tagtcaaaacatcataacgtaatcttcgggtagaaacctatattatggaagtaactgtagaaccctagagaaatttccaaaattgaagacttacatgggc  6799500                    ----------->RAV1(1)                   --------->ANAC46                   --------->ANAC58                   <---------ETT(1)                   ----------->HVH21                   --------->ANAC58                  --------->MYB46(3)                  --------->DEAR3(2)                                               --------->ARR11(3)                <---------ARR14(2)                                                 --------->GLK1(2) --------------------WRI1                                                          --------->ARR14(2) -------->GT1   --------->ARR14(2)                                                 <---------ARR14(2) -----ANAC58  <---------ZAT18       --------->WOX13(1)                             <---------ARR11(3) -----ANAC58  ----------->HVH21  --------->GLK1(2)       --------->AHL20(2)   ----------->GT1   ttgtgaatcgatctaggggacccgacattgagaagaatcaatcgaacttgatactccaaaaaaatcgaaactttagaatttggaaaatctgaaactgaaa  6799600                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                   --                                                                                                  <--                                                                                                  ---                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               <-----                                      --------->ATHB12                                        -------                            <-----------HVH21                            <-----------RAV1(1)  -------            <---------ARR14(2)       --------->AHL20(2)              --------->AHL20(2)     ---------            --------->ARR14(2)      <----------DOF2  <---------MYB52(1) <---------TOE2(3)  <---------LBD16      --------->DAG2      <------------AtMYB77  <---------MYB52(1)   <---------AHL20(2)    <---------At5g28300    ---------->DOF2     --------->MYB52(1)--------->ATHB12    ----------->GT1          <---------ICU4   ttgaaggaaaggggtatatgaagaagtaactgtgagcgatttattgattcgtttcgttatgcgaatgtgaaataaatgttggctactaattttcacggcg  6799700                                                                                                    <                                                                                                    -                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                 <---                                                                                                -----                                                                                               ------                                                                                               ------                                                                                              <------                                                                                              <------                                                                                              <------ <------NtERF2                                                                                ------- ---------->GT1                                                                               ------- -------->LBD16                                                                               ------- ------NtERF2                                                                                 ------- ------->RAP2.6(2)                                                                           <------- -------LBD16                                                                                <------- ------>SPL7                                                                                 >>>>>>>> ------ATERF1(1)                                                                             ======== ----->ATERF1(1)                                                                             ======== ---NtERF2                                                                                   >>>>>>>> -->NtERF2                                                                                   >>>>>>>> ->NtERF2                                                                                    -------- -----RAP2.3(1)                                                               <------------CBF<------ -----ATERF1(1)                   <---------DAG2                             --------->ATHB12-------- -----DEAR3(2)                    <----------DOF2                            --------->ATHB51<------- -----SPL7                        --------------------->WRI1                <---------YAB1   <------- ----RAP2.3(2)               <-------TEIL                                 <---------ICU4--------->ANAC58 --->DEAR3(1)               --------->CCA1(2)                            --------------->AGL15------- ----RAP2.6(2)              --------->ARR14(1)                           --------->ICU4 --------->ANAC46 ----DEAR3(1)              --------->ARR14(2)     *TSS     <---------MYB52(1)<---------ICU4  -------- -->ATERF1(1)              <---------ARR14(2)  <---------At4g35610      --------->ANAC55(2)  ======== -->RAP2.6(3)              --------->ARR11(1)<---------ANAC58           <---------ANAC55(2) --------- >ANAC46          <---------TOE2(3)          <---------ANAC58      <---------MYB46(3)   --------->ANAC58   gccggaaaatcagagccataaatgttgaagattcgactttttttttttcgtctgcctcttcgttttttttggttacttattattgccatcaagacacgtg  6799800   --------->MYB52(2) <--------P <---------MYB52(1) -------GAMYB -------->At5g28300 --------MYB46(3) --------DEAR3(2) ------->MYB55(2) -------ANAC46 -------RAP2.6(2) -------DEAR3(1) ---NtERF2 ------->AtMYB77 --->ALFIN1 ----->HVH21                                             --------->TOE2(3) -PIF5                                                  --------->ANAC58 -MYC3                                                  ----------->GT1 -MYC2                                                  --------->ANAC46 >MYC3                                                  --------->ANAC58 >MYC2                                                 <---------TOE1(2) ->ABF1                                               <---------ALFIN1 >MYC4                                             ----------->HVH21 --bZIP60(2)                                      <-----------HVH21 --ANAC55(2)                                      <-----------TGA1 >>ABI5                                          <---------ANAC58 =======MYC_MYB                                  --------->bZIP60(1) ========MYC_MYB                                 <---------TGA2(1) >>HY5                                           <---------bZIP60(1) >>AtMYC2                                        --------->TGA2(1) ->ANAC55(2)                <------NtERF2        --------->ANAC46 -MYC4                     --------->LBD16       --------->ANAC55(2) ->TGA1a                  <---------ANAC58       --------->ANAC58 --TGA1a                  >>>>>>>>>>E2Fa         <---------ANAC58 --O2      <---------ANAC55(2)                   <---------ANAC55(2) >PIF5   --------->YAB1   <---------ANAC58       --------->ANAC58 ->O2   <---------YAB1    <---------ANAC46      <-----------STF1             --------->ZAT14 =========MYC_MYB        <---------LBD16       <-----------GT1        <-----------GT1               < --->OsbHLH66----------->HVH21              <---------ICU4<---------MYB52(1) <---------ZAT14 <------ZmHOX2a(1)   gcggttagttatcatgtgaacgctcttggcgggaactcgcttccagttattacgtcacacgttaattcggtttttctagttcagagacaattagaggagt  6799900                                                                         --------->At5g28300                                                                  --------->O2                                                                  --------->TGA1a                                                                  ===================================                                                                  <---------ANAC55(2)                                                                  --------->ANAC55(2)                                                              <------ZmHOX2a(1)                                                             <----------ID1                                                          <--------P    ----------->GT1    <---------AHL20(1)                                    ==================MYC_MYB    <---------AHL20(2)       --------->AHL20(2)        <---------------AtSPL8    --------->AHL20(2)      <---------ATHB12      <---------AHL20(2)----------->HVH21             --- ---------AHL20(2)   <----------DOF2          --------->AHL20(2)  <---------O2            <---------AHL20(2)   ttttattttattttcttctatgactttctaatgaattatgtagtttgtttatataatgtggtaaggacaagtgacagtaactatagacaaatgtaattga  6800000                                                            <-----------HVH21                      <---------YAB1                       --------->AtMYB61                   <---------AHL20(2)                --------->ANAC46                   --------->AHL20(2)            <-----------HVH21          --------->AHL20(2)                --------->AHL20(1)              --------->ANAC46--------->ANAC58                --------->AHL20(2)       <---------------AtSPL8 --------->ANAC58         <---------AHL20(2)        <---------ANAC58                 --------------->AtSPL8 --------->ANAC46 <-----------GT1        <---------ANAC58 <---------HSFB2a(2)    --------->bZIP60(2)  --------->REM1(1)  <---------YAB1 ========bZIP_DOF  <---------YAB1      ------->TEIL  <---------bZIP60(1) --------->YAB1--------->AHL20(2) ------->DOF2   <---------ARR11(3) <---------TOE2(3) --------->bZIP60(1) --------->AHL20(2)         <   gaaagcgtaggcttaccatatattattacagaagattaatgtatatgtacacatcacatcaccatcacgctacaattataaaataacatttttattttgt  6800100                                                                                --------->YAB1                               --------->ETT(2)                              <---------ICU4                  <---------ANAC58                                          <---------YAB1                  <---------ANAC46                                          --------->ICU4          --------->GLK1(2)    <---------ETT(2)                 <---------RVE1(1)   <---------ANAC58         --------->ALFIN1   --------->ARR11(3)    <-----------GT1   <---------ANAC58  <---------ZAT18           <---------ARR11(3)   <<<<<<<<<<GT-3b   <---------ANAC46  --------->ZAT18          <---------CCA1(2) <---------CCA1(1)  --------->MYB52(2) <-------TEIL         ----------->GT1      <---------ARR11(3)        <---------HSFB2a(2) ---------MYB52(1)<---------ANAC58      ---------->DOF2        --------->ARR11(3)        --------->HSFB2a(2)   ccgttccttgagaatcaactacgtgcacaagtgtcgatagagaaaagtatatctcatacgagagagatatttttcttcatgatcacaacttctggcaaat  6800200                                                            <----------DOF2                                                          <-------TEIL                                                       --------->At4g35610                                                       <---------At4g35610                  <---------AHL20(2)                   <---------ZAT2              --------->AHL20(2)              =========================bZIP_DOF             <---------YAB1  --------->ANAC55(2)       --------->ZAT2         ===============================================bZIP_DOF         <----------DOF2     <---------ANAC55(2) <---------DEAR3(1)   --------->MYB52(1)     <---------ANAC58  --------->AHL20(2)     <---------TGA1a   ----------->GT1     <---------ANAC58--------->TOE2(3)        --------->TGA1a   <---------TOE2(3)                  <-   ggcaatggcttctttattatttacataaattatgtattaaaaacactcccgtctgcgagctgcattaagaaaaaacagagcaaaacttactcattttgtt  6800300  Previous    Next  AGI:  At1g19650.1    Description:  SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative. similar to SEC14 cytosolic factor, putative / phosphatidylinositol transfer-like protein, putative [Arabidopsis thaliana] (TAIR:AT1G75370.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61112.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47586.1); similar to phosphatidylinositol transfer-like protein III [Lotus japonicus] (GB:AAK63247.1); contains InterPro domain Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); contains InterPro domain Cellular retinaldehyde binding/alpha-tocopherol transport; (InterP Range:  from: 6796193    to: 6799750    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g19660.1    Description:  wound-responsive family protein. similar to wound-responsive protein-related [Arabidopsis thaliana] (TAIR:AT1G75380.3); similar to wound-responsive protein-related [Arabidopsis thaliana] (TAIR:AT1G75380.1); similar to wound-responsive protein-related [Arabidopsis thaliana] (TAIR:AT1G75380.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN76215.1); contains InterPro domain Protein of unknown function DUF151 (InterPro:IPR003729) Range:  from: 6799972    to: 6802676    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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