Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               --------->ATERF1(1)                                       <-----------RAV1(1)                  --------->At4g35610                            <---------ANAC58                                --------->ZAT2                            ------>ZmHOX2a(2)                               <---------At4g35610       <-----------HVH21    <---------ANAC58                              <------ZmHOX2a(1) ------>SPL7=======================HOX2a_HOX2a                         <---------------------WRI1 ------>RAP2.6(3)         <---------ARR14(2)                          --------->LBD16    <------NtERF2 ---ZmHOX2a(1)            --------->ARR14(2)                     ----------->HVH21     <---------DEAR3(1) ->HVH21    <------ZmHOX2a(1)  <-----------HVH21<XXXXXXXXXXXXXXXXXXXXMIR837-5P         <---------DREB2C(2)   gacggtcgaggtcaggacacaagttgtggatcgtgtcaactatgttggagatggacaagagactgttcggaccggaggagcagcctaagtcggcgattcc  6791400                        <---------ICU4                                    <---------YAB1                        --------->ATHB12                             <---------RVE1(1)            <--                        <--------HAHB4                               <---------CCA1(1)            ---       <---------ARR11(3)--------->TOE2(3)                          --------->ARR11(3)   <------ZmHOX2a(2)      <---------GLK1(1)<---------ATHB12                             <---------ARR11(3)  <---------ARR11(3)   --------->ANAC58    --------->ICU4                    --------->At4g35610 <-----------GT1---------   --------->ANAC58    <---------YAB1      <------NtERF2 <---------At4g35610<<<<<<<<<MYB98  <--------   aatgctcgaaatctctgaattgctcatcattaacttcttcaaggcctcgtccattactcttctgcctagagatattatgttactctgcgagatcacataa  6791500                             --------->HSFC1(1)                  --------->YAB1                  <---------ICU4               <--------HAHB4--------->HSFB2a(2)            --------->ATHB51  <---------ARR14(2) <-----------GT1 ------>MYB46(1)        <---------ICU4          --------->ANAC46  <---------ZAT14--------->ICU4      ------>MYB83           <--------ATHB1       --------->ZAT18  --------->ARR14(2)<---------YAB1 <---------MYB59         <---------ATHB51      <---------REM1(2)  --------->ZAT14<---------YAB1 <<<<<<<ZML2                <---------ATHB12      <---------ZAT14 -------ICU4   <---------ICU4<---------HSFB2a(2)           --------->ICU4      --------->ZAT14 ------>YAB1  <---------YAB1 >>>>>>>ZML2              --------->YAB1       ------->TEIL    --------->AHL20(2) >ANAC55(2)   --------->ICU4 <---------HSFC1(1)       <-----------GT1  <---------TOE1(2)   <---------AHL20(1) -ANAC55(2)<---------YAB1 --------->AGP1  <---------YAB1 --------->YAB1<---------TOE2(2)   --------->AHL20(1)   tcagtatacacttgtcattattattacagttctagaaccaaattatgtttaagttataacaataattcactcgtatgtatgtgtacacgagaatataatg  6791600                    ----------->RAV1(2)                                                        <-----                   ------->TEIL   <---------ARR11(3)                                         <-------                   -------->P     --------->ARR11(3)           <----------DOF2       <----------DOF2             --------->ICU4      <---------GLK1(1)         --------->ARR14(2)     --------->ANAC58        --------->YAB1       --------->ALFIN1             <---------MYB52(1)      --------->ANAC58   --------->AHL20(2)     <---------DEAR3(1)          <---------At5g28300     <---------ARR11(3)   <---------AHL20(2)--------->TOE1(3)               <-----------GT1          --------->ARR11(3)   catatttatatcaaaatgatcaacctgagcggtggagttcttggcataactcgtttcaccgtttcctttgttcatgtgaagaactcgcattacctccatc  6791700                                                                                <-----------------AGL3                                                                           <---------------------WRI1                                                                         <------MYB46(1)                                                                         <------MYB83                                                    <---------------AGL15<---------ANAC46                                                    ==============================================MADS_MADS                                                   <---------TOE2(3)    --------->MYB55(2)                                        --------->At4g35610             <---------MYB46(3)       ----                         <----------DOF2<---------At4g35610             --------->MYB59   ---------->DOF2 ----CCA1(2)   <----------DOF2      <---------REM1(1)  ------->TEIL <-----------RAV1(1)  <------ZmHOX2a(1) --ALFIN1    <----------DOF2 <----------DOF2  ----------->GT1       <---------REM1(1)  <---------TOE2(3)   tctctccctctctcgctctttgtgtctctttctttttgatgaagcagaaggttaatgaatatagtaagtgatgttgggtcgatatatataaggaaagagg  6791800                                                                                             <-------                                                                                             <-------                                                                                             <------MYB46(1)                                                                                             <-------                                                                                             <------MYB83                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                           <---------MYB55(1)                                                                                          <---------MYB52(1)                                                                                         ------------                                                                                         <-------GAMYB                                                                                        <---------ANAC58                                                                                        <---------ANAC58                                                                                     <-------PIF5                                                                                     ------->PIF5 ---                                                                                    <---------TGA1a                                                        <---------WOX13(1)          --------->TGA1a<-                                                       <------------CBF             <---------ANAC58                                ------->TEIL          --------->ATHB12              =============MYC_MYB                   >>>>>>>>>WRKY18                   <---------YAB1     <-------TEIL<---------ANAC58       --------->ATHB12    --------->O2<---------AHL20(2) ----------->GT1 ------->TEIL  --------->MYB52(2)    <---------DOF5.7(2)  ----------->RAV1(1)         <---------AHL20(2)--------->AtLEC2<-------TEIL<- ----->ALFIN1     ----------->HVH21  *TSS  <---------AHL20(2)   <-----------GT1    ------->TEIL <----   tgttgtaaacgattagagttttgacagccacatgaatctttttattttttggtttttaattggtataaactacatgcatcttatggacgtgcgttgggtg  6791900                                                                                                  <-- --ANAC58                                                                                     ------- --ANAC46                                                                                     <------ --ANAC58<---------ALFIN1                                                                    <------- >MYB55(2)                                                                                  --------- -MYB46(3)                                                                                 ---------- >MYB52(2)                                                                              --------->ANAC46 --------->WRI1                                                                  --------->ARR14(2) ---->TEIL <---------ALFIN1            <----------DOF2            --------->ANAC58      --------->ANAC58 --------At4g35610                 --------->PCF5                 --------->ANAC58      --------->ANAC58 --------CCA1(2)          --------->TOE2(2)       <---------AHL20(2)  ----------->GT1 <---------ALFIN1 ---TEIL<---------REM1(2) --------->TOE1(2)    ------->TEIL   <-----------GT1    <---------ARR14(2)   catctctctctccacacacacatataaacatacgatggtcccttttacgaatttttttttatattaacaagtaagttaatcggtatccacacgcagttaa  6792000                                                               ---------->DOF2 -------ICU4                                               --------->ANAC46 -->AHL20(2)                                               --------->ANAC58                       <-- ---AHL20(2)                                               --------->ANAC58                   ------- --MYB52(1)                              <----------DOF2  <---------ZAT18----------->GT1     <------- >At5g28300                 --------->ZAT14             <---------LBD16 --------->DAG2      <-------- ->GT1----------->RAV1(2)   <---------ZAT14             --------->LBD16---------->DOF2     --------->MYB52(1)   ttagttcaacctggattttagaaaattgagtaaactctagtgactttgagttttaatccgcgcgcaaaagtcataaagtaactcattttcaaaaaccggg  6792100                                                                             --------->AHL20(2)                                                                     <------MYB46(1)                                                                     <---------ANAC55(2)                                     ----------->GT1                 <------MYB83                                     <---------ANAC46               --------->MYB59                                 <---------GLK1(1)                  --------->MYB46(2)                                 --------->GLK1(1)                  --------------->AtSPL3                              --------->ANAC58                      --------------->AtSPL8    <----------DOF2           --------->ANAC58                      <---------------AtSPL8 -------KAN4(2)           --------->ANAC58                          --------->MYB111(1)             - -->LBD16           <---------AHL20(2)       ----------->GT1    <---------ICU4               -------- --LBD16            --------->AHL20(2)       <----------ID1 <---------AHL20(2)              <-------- -LBD16 <<<<<<<<<<MYB80   --------->ANAC58 ---------->DOF2  --------->AHL20(2)   <---------AHL20(2) <   aatagtctttggtttgatgaaatttatcaggcaagaattctgtgaaaaagaaaaaacaaaaattaaaaattaggtaccattatatatatgtccaatagtt  6792200                                                                                                 <---                                                                  <---------ARR14(2)             <---                                                                  --------->ARR14(2)            -----                                                                --------->LBD16              <<<<<<<<                                                              <---------At4g35610            <<<<<<<<                                                              --------->LBD16                <<<<<<<<                                          <---------At4g35610 <---------LBD16                <<<<<<<<    <---------ANAC55(2)              --------->MYB46(3)     <---------LBD16             <-----------GT1 -------->ARR11(3)                 <<<<<<<<<GT-1         --------->GLK1(1)            --------->CCA1(2) --->GT1                      <---------YAB1             <---------GLK1(1)           <---------ARR11(3) -ATHB12    <---------------AtSPL8 <-----------GT1    <---------YAB1                 --------->ARR11(3) ---------ARR11(3)      --------->AHL20(2)--------->At4g35610<---------ANAC46       <<<<<<<<<RAP2.2   aatatcatgtaagtcgagtacgaagataaattcttattaaccactgctgatttcatatgatttccgcggattccatgaagtagtttagatatacaatcct  6792300  Previous    Next  AGI:  At1g19640.1    Description:  JMT (JASMONIC ACID CARBOXYL METHYLTRANSFERASE); jasmonate O-methyltransferase. Identical to Jasmonate O-methyltransferase (JMT) [Arabidopsis Thaliana] (GB:Q9AR07;GB:Q9FWR8); similar to BSMT1, S-adenosylmethionine-dependent methyltransferase [Arabidopsis thaliana] (TAIR:AT3G11480.1); similar to jasmonic acid carboxyl methyltransferase [Capsicum annuum] (GB:ABB02661.1); contains InterPro domain SAM dependent carboxyl methyltransferase (InterPro:IPR005299) Range:  from: 6788876    to: 6791837    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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