Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    --------->KAN4(2)                 --------->HSFB2a(1)                 <---------HSFB2a(1)                                 <---------DOF5.7(2)         <---------YAB1                                              --------->MYB52(1)      <---------AHL20(2)                                           --------->ARR11(3)  <---------AHL20(2)                                       --------->ANAC58 <---------AHL20(1)                        <---------AHL20(2)     --------->YAB1                ----- --------->AHL20(1)             --------->MYB52(1)     --------->ANAC58                         <---- --------AHL20(2)<---------HSFC1(2)        <---------YAB1  --------->ANAC58                    <----- ------>AHL20(2) --------->HSFC1(2)     --------->ICU4 --------->ANAC58<------------MYB.PH3(1) ------ ------YAB1---------->DOF2     ---------->DOF2<---------YAB1   ---------->DOF2                <------ZmHOX2a(1)   ttatatattttatcaaagaaaattcccaaaaaccaaaggggaatttttattactgaaacccaagctaaagataacggttttgacatatagggattaggat  6781600                                                                                                   <-                                                                                                   --                                                                                              <------                                          --------------->AGL15                               -------            ---------->DOF2         --------->ANAC58                                         --------        --------->CCA1(2)           --------->ANAC46                                         <-------       --------->ARR11(3)       --------->CCA1(2)          <---------ANAC58               --------->ARR14(2)       <---------ARR11(3)      <---------ARR14(2)          <---------ANAC58               <---------ARR14(2) ---->GLK1(1)        <-------GAMYB  --------->ANAC58   <---------ANAC58                --------->ANAC46 -----GLK1(1)     <---------At5g28300     <---------------AGL15                     --------->TOE1(2) ----ARR14(2)   ----------->HVH21<-------TEIL          <---------ANAC58             --------->TOE2(2) --->ARR14(2)--------->DAG2    --------->ARR14(2)    <---------YAB1         --------->At4g35610------   ttgctacaagatataaaagtgaccgttgaagaagattcacacaactcttaagagtatgcttgcttcagcaattgaagtagcagaaacatgcgaaacccgg  6781700                             ------->PIF5                             <-------MYC3                 --------->TGA1a                 --------->O2<-------MYC4                 <---------O2<-------PIF5       ----------->HVH21     ------->MYC2     <---------ANAC58        ------->MYC3                        <-----------RAV1(1)     <---------ANAC58        <-------MYC2                        <---------ZAT6 --------At4g35610          --------->ANAC58                     --------->ALFIN1 ------->At4g35610--------->LBD16                            <---------TGA1a ---LBD16        <---------TGA1a           --------->ZAT6    --------->TGA1a -->LBD16        <---------ANAC46   <---------CCA1(2)        <---------O2                     <------ ->TOE1(2)  --------->ANAC58--------->HSFB2a(1)              --------->O2                     <------ --LBD16    --------->ANAC58--------->ANAC58            --------->ANAC46                  <---------ANAC58 --->LBD16  --------->ANAC46<---------HSFB2a(1)    <-----------HVH21   ----------->RAV1(1)<---------ANAC58   gaactgagcgtgacaagccccgtgtgaagcacgttcccatctcttacactgactgtcacagccacgagtgttgccacaaaaccctgtccatgtcttgctt  6781800                        ------>NtERF2                       --------->ANAC46                 <---------ARR11(3)                       --------->DREB2C(2)              --------->ARR11(3)         <---------GLK1(2)   <---------ICU4       --------->YAB1    --------->ANAC58   --------->DEAR3(1)        <---------ATHB12                   --------->YAB1    --------->ANAC58   ------->GAMYB    <---------GLK1(2)                 <----------DOF2<-------TEIL ------>ZmHOX2a(1)     --------->RAP2.6(2)     --------->WOX13(1)  --------->YAB1--------->WOX13(1) ---ANAC58            --------->MYB46(3)--------->ARR14(2) <---------AHL20(2)  <---------YAB1 ---ANAC58          <---------ALFIN1    <---------ARR14(2)--------->AHL20(2) --------->YAB1   ctcctctcgcaaattcttccttccaccgccatcatctctgcaaattctccaatcacaagattttatatatcatcatctttcatcaatgagattcatacat  6781900                                              >>>>>>>>>>>>>>>>>LFY                                           --------->YAB1                                          <---------YAB1                                        --------->YAB1                                       --------->ICU4                                       <---------YAB1                                  <---------ANAC58                                  <---------ANAC58                                  <---------ANAC46                                <---------ZAT14                                --------->ZAT14                                --------->ZAT18                               --------->ALFIN1           --------->CCA1(2)   ---------->DOF2                       <---------HSFC1(2)--------->ARR11(3)     <------ZmHOX2a(1)  ---------->DOF2      --------->HSFC1(2)<---------ARR11(3)   <---------TOE2(3)   attacaaagagattacagtcgaagaagcttagagtggagtgatgatcataccagtggaagctataaggaagatggagaggcaaaggaagagcataagtgt  6782000                                          --------->At4g35610                                          <---------ZAT2                                     <-----------GT1                   <-----------RAV1(1)    <---------At4g35610               <----------DOF2  <---------YAB1         --------->AHL20(2)                     -------               <---------DAG2 >>>>>>>>>GT-1            <-----------TBP                       --------      --------->ANAC58        *TSS<---------ICU4     <----------DOF2                     --------->WRKY38(1)      --------->ANAC58     ----------->GT1--------->ZAT2                                 --------->WRKY12   gtaagaagaagccatgactttttgttgtatggttaatattcactagctgagagctctttatatacaaatgtattaaaaacccgtttaatctttgactgta  6782100              <---------HSFC1(1)              --------->HSFB2a(2)      <---------YAB1  <---------YAB1       --------->ZAT18   <---------YAB1<<<<<<<ZML2            <---------ANAC46 -->At5g28300 <---------HSFB2a(2)   <---------------------WRI1                  <---------GLK1(2) --->GT1      --------->HSFC1(1)   <---------AtLEC2                       <-----------GT1  --------->AtLEC2   aaacgattatcgttctctagaactatccttgtattttgtatggtgtgaacaaggagaaactatgaagcctactatttatccaaattcttatccatacaag  6782200                                                                                    --------->TOE1(3)                                <---------O2                                        --------->TOE2(3)                                --------->O2                                 <---------YAB1    ------                  <---------YAB1<---------ANAC46                          <---------AHL20(2)  -------           <----------DOF2<----------DOF2                <---------ZAT6  --------->AHL20(2)  --------   ttttgactatagactttgtgatgatacacttttgacgtctaatttgttcggacatgttagtgttattagttcaaattttatgtttgccttaaacaaaaag  6782300             <---------TOE2(3)       <---------MYB52(2)                                                                 -----------  --------->ANAC58       --------->ANAC46                                                 <---------MYB46(3)  --------->ANAC46      <---------TOE2(3)                                           <---------AtLEC2  --------->ANAC58   <---------AHL20(2)                                            <-------TEIL ----->GT1  <-----------GT1                      ---------->DOF2              ---------->DOF2 -->DAG2    --------->YAB1--------->TOE2(3)    <---------YAB1               --------->ANAC58 -->DOF2    --------->MYB52(1)              --------->ICU4                  --------->ANAC58   ttaaacgcaactaataacgatatataaacgtaaatgaagacacaaaattatgaaagtctatagtcaaaaactgttcgaacgaaagtgcatggtggtcaaa  6782400                                                                    <---------------AtSPL8  <--------                                                                    --------------->AtSPL8  <--------                                                                    <---------------AtSPL3  <--------                                                               <---------AHL20(2)           <--------                                                               --------->AHL20(2)        <---------WOX13(1)                                                              --------->AHL20(2)        <---------AtLEC2                                                              <---------AHL20(2)        <---------ANAC58                                                              <---------AHL20(1)  --------->AHL20(2)                                                           <---------AHL20(2)     <---------AHL20(2)                                                           --------->AHL20(2)     <---------ICU4                                                          --------->AHL20(1)      --------->ATHB51                                                          --------->AHL20(2)      --------->ATHB12                                        <---------YAB1    <---------AHL20(2)     --------->ICU4                                      --------->YAB1      <---------AHL20(1)<------ZmHOX2a(2)                               <------MYB46(1)           <---------AHL20(2)--------->ARR11(3) <------ZmHOX2a(1)             <------MYB83------->TEIL  --------->AHL20(2)<---------ARR11(3)<------- >GT1   ------->TEIL          --------->MYB59      --------->At4g35610 <-----------GT1  <---------ANAC58   acaggacatgaatctaactaagcatcgcaaattaggtctagcatgaatgtaacagctaaattaatttaattttgtacgatctaattatttgcttgatatt  6782500  Previous    Next  AGI:  At1g19610.1    Description:  LCR78/PDF1.4 (Low-molecular-weight cysteine-rich 78). Identical to Low-molecular-weight cysteine-rich protein LCR78 precursor (LCR78) [Arabidopsis Thaliana] (GB:P82787;GB:Q8VZQ7;GB:Q9FWR6); similar to LCR67/PDF1.1 (Low-molecular-weight cysteine-rich 67) [Arabidopsis thaliana] (TAIR:AT1G75830.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64556.1); contains InterPro domain Gamma thionin; (InterPro:IPR008176); contains InterPro domain Knottin; (InterPro:IPR003614) Range:  from: 6781474    to: 6782030    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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