Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             --------->At4g35610                                                                           --------->ZAT2                                                                           <---------At4g35610                                                                        <---------At4g35610                                                                        --------->At4g35610                                                                       ------->GAMYB                                                                      --------->MYB46(3)                                                                     ------>MYB83            --------                                                                     ------>MYB46(1)        <--------                                                                    ----------->RAV1(1) <---------GLK1(1)                                                  ------>NtERF2     --------->MYB52(1)  --------->GLK1(1)                                                 --------->DEAR3(1)--------->MYB46(3)  --------->ARR14(2)    --------->AtLEC2                            <------NtERF2<------ZmHOX2a(1)<-----------HVH21 ------->TOE1(3)                      <-------GAMYB         <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ------->TOE2(3)                     ----------->GT1      ======================RAV    <---------ARR14(2) ---->DOF2                           <---------MYB46(3)   <-----------RAV1(2)<----------DOF2--------- ->YAB1                   ---------->DOF2     <---------DEAR3(1)   --------->AtMYB61   <---------GLK1(2)   agcttaatgcaaaacaaaaacagagagagaaagagaagatggttacagtcgccgagatgatcaggagcaccaacagcagctttcacacagatttccagag  6774400                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   >>                                                                                                   <<                                                                                                   --                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                      <---------YAB1                                         <---------WOX13(1)                      -------->ATHB1  <---     <---------GLK1(2)                 --------->ATHB12                          --------->ATHB51<---   <---------YAB1                      <--------ATHB1                            <---------ICU4 -----  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) --------->ICU4                             --------->YAB1 ----- ->LBD16  <<<<<<<<<TBF1    <---------ARR14(2)   --------->WOX13(1)               <--------HAHB4 ----- -HSFB2a(2)     --------------------->WRI1  ----------->GT1                     --------->ICU4<------ >HSFB2a(2)     <----------DOF2       <---------YAB1                <----------DOF2 <-----------GT1==   ccatcttgattcttcttcctttgtttgcagagacggatgaatgattgagttaatcagtgagaaggcttagcttttaaactgaattattaccattctccac  6774500       <---------PCF2     <---------ZAT18    --------->ALFIN1 ------>P ------->MYB52(1) --------->RAV1(1) ---->MYB46(1) >>>>>>>>>>>>>>>LFY                    <-------MYC3 <<<<<<<<<<<<<<<LFY                    <-------MYC2 ---->MYB83                            ------->MYC3 ------>ANAC46                         ------->MYC2 -------ALFIN1                        --------->TGA1a                   --------->ANAC58 ------>MYB55(1)                      <---------TGA1a                 --------->MYB52(1) ----->DEAR3(1)                       <---------O2                 --------->ANAC58 ------MYB55(2)                       --------->O2                 --------->ANAC46 ----->MYB46(3)                       <---------ANAC46             <---------ANAC55(2) ------MYB111(2)                      --------->ANAC55(2)          --------->ANAC55(2) ------MYB111(1)                      <---------ANAC55(2)          --------->ANAC58 ---->ANAC58       *TSS       ==================bZIP_DOF         --------->CCA1(2)   --------->ATHB12 ---->ANAC46   <-----------GT1<----------DOF2           ----------->TGA1--------->ANAC58 ---->ANAC58<---------ICU4 <-----------GT1     <---------ANAC58 --------->ARR14(2)  <---------ZAT6 ---ALFIN1 --------->ICU4 <---------CCA1(2)    <---------ANAC58 <---------ARR14(2)<-----------------AGL1 ===============================================MYC_MYB ----------->HVH21   <------------CBF   ccaccagtgggccatttttacccgatgtttatcttttctcacgtgttatgcgttgcaagtgacgacgatacgaaacgacattgttactgatagggccatt  6774600                                                                     <---------AHL20(2)                                                                 --------->AHL20(2)                                                          --------->SPL7                                                        <---------SPL7                                                       <---------ANAC58                                                       <---------ANAC58   ----------->GT1             <------MYB46(1)                          <---------------AtSPL3             <------MYB83                             --------------->AtSPL8           <-----------RAV1(2)                        <-------TEIL   <---------YAB1          <------NtERF2                               --------------->AtSPL3         <---------DEAR3(2)                           <---------------AtSPL8        ------->TEIL        <---------DEAR3(1)                        --------->AHL20(2)--------->AHL20(2)        --------->ETT(2)                          <---------AHL20(1)<---------AHL20(1)        --------->ETT(1)                       --------->YAB1    --------->YAB1 <---------TOE2(3)       --------->RAP2.6(3)                  ----------->GT1 <---------MYB59 <----------DOF2       <---------ORA47(1)          <---------ZAT6 <---------AHL20(2)--------->AHL20(1)       --------    <---------AtMYB61            ----------->GT1  --------->AHL20(1)<---------AHL20(2)      ---------   tgatttttggtcggcaggttttggaccgttcaatttagtgaaaatatagtaataaattcgtaccgaataatataatcggtttaatgaaactactacctga  6774700                                                                                                 ----                                                                                                <----                                                                                                <----                                                                                                -----                                                                                                -----                                                                                           --------->LBD16                                                                                           --------->HSFB2a(2)                                                                                           --------->ANAC58                                                                                           <---------ANAC55(2)                                                                                           --------->ANAC55(2)                                                                                           <---------HSFB2a(2)                                                                                           --------->ANAC58                                                                                       <-----------HVH21                                                                                       ------>NtERF2                                                                                       --------->ABI4(1)                                                                                       <---------RAP2.6(3)                         <---------ANAC46                                 <---------AHL20(1)    -----                         <---------ANAC55(2)                              --------->AHL20(2)    <----                         <---------ANAC58                                 <---------AHL20(2)   <-----                         --------->ANAC55(2)                              --------->AHL20(1)---------                 <-------TEIL                                        --------->At5g28300  <---------LBD16        ----------->ARR10<---------ANAC58               <-----------GT1 --------------------->WRI1 ->TOE2(3)    <------MYB83  <------------CBF          *TSS--------->MYB46(3)           <---------SPL7 -->RAV1(2)   <------MYB46(1)                 <-----------GT1  --------->At5g28300    --------->DEAR3(1)   aatatcgaattagatttggttcatatttcgtattgttttggttcgattaaaccatattaaaccactgtaactgtaatttattgtttcgccgtcccggaat  6774800        --------->GLK1(1)  ------>ZmHOX2a(1) ----->KAN4(2)                                   --------->ZAT2 -----KAN4(1)                                    <---------ZAT2 -----HSFC1(2)                                   <---------At4g35610 ---->HSFB2a(1)                     <---------ANAC58 ---->HSFC1(2)                      <---------ANAC58 ---->KAN4(1)                   <XXXXXXXXXXXXXXXXXXXXMIR835-3P                           ------>ZmHOX2a(1) -----HSFB2a(1)        ----------------------->TaNAC69(2)                       --------->ZAT14    <- ----KAN4(2)       <---------At4g35610<---------CCA1(2)          ---------->ID1 <---------ZAT14  ---- >LBD16 <---------GLK1(1) <---------AHL20(2)     --------->At4g35610           <---------ZAT6--------   gttcctgttgaaatccattttcgctgattttttttcttccgtctcttcttcagcttcgaccattttcgtcttcttcattcagtgttgagtcctcgtttac  6774900                                                                      --------->LBD16                                                                     <---------ANAC55(2)                                                                     <---------ANAC58                                                                     --------->ANAC55(2)                                                                     <---------ANAC55(1)                                                                     <---------ANAC58                                                                    ------>ZmHOX2a(2)                                                                   <------ZmHOX2a(2)   --------->ZAT2                                                 <---------ARR14(2)   <---------At4g35610                                     <----------DOF2   <---------ZAT2                                        <------MYB83<---------ANAC46        ------>ZmHOX2a(2)   --------->At4g35610                                   <---------DEAR3(2)          --------->ARR11(3) <---------ZAT18                                         <------MYB46(1)           --------->ANAC58 ----------HVH21                                <-----------GT1   --------->ARR14(2) <---------ARR11(3) ----->TOE2(2)       <------ZmHOX2a(2)  <------NtERF2   <---------DEAR3(1)         --------->ANAC58 ->WRKY12  ---------->DOF2        <---------STY1(1)    <---------ORA47(1)       --------->WRKY18(1) <   ctgtgagctcgaagaaagtgacgatcaatgggaaccctaggcagagcattttactcggtcggtttttggatccgtgagactggtcaagctcttgatcgcc  6775000                                            <---------GLK1(2)                                            --------->ARR11(3)         <-----------HVH21    --------->HSFB2a(2)      --------->ZAT6       <------NtERF2          <---------HSFB2a(2) --------->ANAC46                               ----      ------>NtERF2           --------->LBD16--------->GLK1(2)                                 <-----    ---------->ID1     <-----------GT1    ----------->ARR10                          ---------->DOF2  <---------MYB46(3)<---------ICU4     --------->TOE2(3)                       --------->ARR14(2)<--- -------GAMYB      --------->ICU4      --------->TOE1(2)       <-----------GT1 <---------ARR14(2)<---   tcggttgtcgccttcaaggcaaaaattacttccgagaacaacgtaagattctgcgtaactctatttttcactccgatttcgaattcgtaaagagtgagga  6775100                                             --------->HSFB2a(2)                                             <---------HSFB2a(2)                                            ------>ZmHOX2a(2)                                          <---------ARR14(2)                                          --------->AGP1                                          --------->ARR11(3)                                          --------->ARR14(2)                                  <------MYB46(1)                                  <------MYB83                            --------->ARR14(2)                                 --------->MYB59                          --------->GLK1(2)       ----------->GT1           --------->MYB46(2)                       <---------ARR14(2)  --------->ATHB12    --------------->AGL15--------->CCA1(2)       ---------->DOF2 <---------YAB1      <-----------------AGL1<------ZmHOX2a(2)    <------MYB46(1) --------->ARR14(2) ----->HSFC1(2) --------->At4g35610       <---------ARR11(3)    <------MYB83<---------LBD16 -ZmHOX2a(1)    <---------At4g35610       <---------AGP1       <---------TOE1(2)<---------ARR14(2) ------HSFC1(2) <---------ZAT2 <---------MYB52(1)         <----------DOF2<---------GLK1(2)          - ------HSFB2a(1)--------->ZAT2 <--------P<---------GLK1(1)--------------------->WRI1                <   gtttcgattgggtaattcagctcacctattctggttaggttagagatctggaattgatgtctttgtaggtatagcgattctggattcgaatggcacaagg  6775200                                                              <---------ANAC46                                                              <---------ANAC58                                                     <---------ANAC55(2)                                                     --------->ANAC58                             ---                                                     --------->ANAC46                             ---       <---------ANAC46                              --------->ANAC55(2)                      <------   <---------WOX13(1)                                --------->ANAC58       <---------TOE2(3)<------- --------->ATHB12                                <-----------HVH21    <---------AHL20(2) <---------ZAT14 -------->AHL20(2)       <---------At4g35610   --------->LBD16<---------ANAC58           --------->ZAT14 ---------AHL20(2)    <---------At4g35610      ------>ZmHOX2a(1)    --------->ANAC55(2)  --------->REM1(2)   gattaattgatgtggaatgtgttttgctgcttagttttttttttgtttcctggtcacgaaatttgcttatatgtaattgtggttttctctgtgtagtgtc  6775300  Previous    Next  AGI:  At1g19570.1    Description:  DHAR1 (DEHYDROASCORBATE REDUCTASE); glutathione dehydrogenase (ascorbate). similar to DHAR2, glutathione dehydrogenase (ascorbate) [Arabidopsis thaliana] (TAIR:AT1G75270.1); similar to unknown [Populus trichocarpa] (GB:ABK93121.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Glutathione S-transferase, C-terminal-like (InterPro:IPR010987); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Glutathione S-transferase, N-terminal (InterPro:IPR004045); contains InterPro domain Glutathione S-transferase, C-terminal (InterPro:IPR004046) Range:  from: 6773293    to: 6774519    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g19580.1    Description:  GAMMA CA1 (GAMMA CARBONIC ANHYDRASE 1); carbonate dehydratase. similar to APFI, carbonate dehydratase [Arabidopsis thaliana] (TAIR:AT1G47260.1); similar to unknown [Populus trichocarpa] (GB:ABK95146.1); contains InterPro domain Bacterial transferase hexapeptide repeat; (InterPro:IPR001451); contains InterPro domain Trimeric LpxA-like; (InterPro:IPR011004) Range:  from: 6774754    to: 6777447    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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