Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         <------ZmHOX2a(1)                                                                                      <----------ID1       --------->AHL20(2)                                                        <------MYB83       --------->ATHB51                                                          <------MYB46(1)       <---------AHL20(2)                                                     --------->ARR14(1)       --------->ATHB12                                                       --------->CCA1(2)      <---------AHL20(2)                                                     --------->ARR14(2)      --------->ICU4                                                         --------->ARR11(1)     < ------GLK1(2)                                                               <---------ARR14(2)  <--- ------ARR14(2)                                                              --------->ARR11(3) <---- ----->ARR11(3)                                <---------GLK1(1)         ---------->DOF2    --------- -->YAB1                                <---------YAB1        --------->AtMYB61 --------->MYB59 -----   attttgaaattatttgaactaaacatatgtttctactaaatcactatagaaatcacaaaaacgaccacaaactctaaaagatttggtaaggacaaaaaga  6757000                                                                                                    =                                                                                                    -                                                                                                   <-                                                                                                   ==                                                                                                  <--                                                                                                  <--          --------->YAB1                                                                          ---   --------->TOE2(3)                                                                              <-- -----------GT1                                                                                   --- ------GLK1(1)                                                                                    --- -----ARR11(3)         ------>NtERF2                                                              --- ->DOF2  <---------ATHB12                                                                       ----- ---->ARR11(3)<---------ARR11(3)  <-----------GT1                 ---------->DOF2          <-------TEIL   tttcacctcaaatcaaaatcatcgatgcctctagatttacttccaacatcgacggttttgtatttaggcaaaggtactaagtcttgttcgatgttcatga  6757100               <---------ANAC46          <------ZmHOX2a(1) ================HOX2a_HOX2a ----->ZmHOX2a(2) -----ZmHOX2a(2) ================HOX2a_HOX2a -------ARR14(2)            <-----------GT1 -------ARR14(3)       <---------ANAC46      <-----------GT1 ------>ARR11(3)       <---------ANAC58   --------->ARR14(2) -------ARR11(3)       <---------ANAC58   <---------ARR14(2)       <-------MYC3    <------NtERF2 ------>ARR14(2)    ----------->TGA1  <---------At4g35610          ------->MYC3<-----------HVH21    < ------>AGP1   <---------ANAC58       <---------ZAT14             --------->O2------->GAMYB<--------- ------>ARR14(3)    ----------->HVH21 --------->ZAT14     <----------DOF2    --------->MYB46(3)   --- ------>ARR10  <---------ANAC58    ------>ZmHOX2a(1) <---------At4g35610   --------->MYB52(1)   -----   gatcttcaacgaggatgtcgtagtgacgtttaacttcctctgcagatttacttccaactgctttagccacgttttgccaacggtcgggagtgtctttatc  6757200                                 <---------ANAC46                                 <---------ANAC58                                          <---------                --------->HSFB2a(2)                                                 --------->AHL20(2) ---------DOF5.7(2)              <---------ANAC58                                   <---------AHL20(2) -DOF2 ---------->DOF2<---------ARR11(3)                                       <---------AHL20(2) ------>DOF5.7(2)     --------->ARR11(3)                 <---------At4g35610   --------->AHL20(2) ---->YAB1      <---------HSFB2a(2)               --------->ARR11(3)           <---------AHL20(1)   gtaaacggctaaagccctctcgaacatcttgttttgcttagacgtccaagaagagctcgagctcatagaactagaggccattttatttaaattcttttgg  6757300                                                                                          ------>ZmHOX2a(1)                                                                                        =============                                                                                        <------------                                                                             <---------------AGL15                         --------->ANAC58                                   =========================                         --------->ANAC58                                   ----------------->AG                  ----------->GT1       --------->DAG2                      ----------------->AGL1         --------->CCA1(2)             ---------->DOF2              *TSS    <-----------------AGL3        --------->ARR11(3)        ---------->DOF2           <---------YAB1  ----------------->AGL3  --------->CCA1(2)  ------------------------>ANAC81        <---------ANAC46<-----------------AGL2  < -DOF2  <---------ARR11(3)  ---------->DOF2    ------>ZmHOX2a(2)    --------->MYB52(1)  -------------   gaatatatgagatatatatagggaaacaagaaaagagaaagaaaagggatcgatactaagttacgaatacaaacgaatgccaaaataggctccttatatg  6757400                                 <---------ZAT6                            <---------REM1(1)                                        <----------DOF2                      --------->LBD16                                                <---------------AGL15                     --------->ANAC46                                               <----------------                     <---------ANAC55(2)        <---------AHL20(2)                  -----------------  ---------->DOF2   <---------LBD16             --------->AHL20(2)                  <---------------- ==================================================================================================== -----AGL3        --------->ARR14(2)         <---------ARR11(3)                <---------YAB1 =====MADS_MADS   <---------ARR14(2)         --------->AHL20(1)              --------->YAB1 ------ZmHOX2a(1) --------->GLK1(2)          <---------AHL20(1)             <---------YAB1 ---->AGL3       <---------GLK1(2)      ------------>CBF              ---------->DOF2--------------->AGL15   gaggaaaagagagttgagagattccgcaagttgtagtgtttatccaatatttttttagtttgtataccaaaataaagaattatagttctttttatgggtc  6757500                                                                                ------->GAMYB                                                                       --------->DOF5.7(2)                                                                       <---------MYB52(1)                                                                      --------->At5g28300                                                                     ----------->GT1                                                                 <---------WRKY38(1) -AGL2                                <---------ANAC58           <---------WRKY12     <---------TOE1(2) >AGL3  <---------TOE2(3)             <---------ANAC46    <---------HSFB2a(2) <---------TOE2(3) -AGL3  <---------TOE1(3)             <---------ANAC58    --------->HSFB2a(2)--------->MYB52(1) =MADS_MADS <-------TEIL       <---------ZAT14           <---------ETT(2)    <-----------GT1        -   tacattttttaaggtccataagggttttcagagcatagtgtcgtattgtatgaagaatgtcgagaagtcaaccgttaattaacgctcgtatgtgttctta  6757600                                                                                --------->ANAC55(2)                                                                                <---------ANAC55(2)                                                                               <-------TEIL                                                                               --------->SPL7                                                                             <---------SPL7                       --------->AHL20(2)                            <---------ANAC58                      --------->AHL20(2)                             <---------ANAC46          <-----                      <---------AHL20(2)               <---------MYB46(3)  <---------------AtSPL8              <-----------GT1                       --------->MYB52(2)   <---------AtLEC2    <------- ---------->GT1     <----------DOF2             ----------->GT1      <---------ANAC58      --------->YAB1   tgaagtttaaaattagtaacctctttaaattatagggtttaagcgtttaatggttatttgttgagcctatgacttgcagggtacgtagtagaatcatctt  6757700                            --------->AHL20(2)                           <---------YAB1                          --------->TOE2(3)                         <---------ICU4                                                      ------>ZmHOX2a(2)                         -------->ATHB1                                                     <------ZmHOX2a(2)                         <--------HAHB4                                                    <---------ARR14(3)                  --------->DAG2                                                           --------->ARR14(3)                 --------->MYB52(1)                                                        <---------ARR14(2)                 ---------->DOF2                                                           --------->ARR14(2)              <---------ANAC55(2)                                                          <---------ARR11(3)             <---------TOE2(3)                                                       --------->ANAC58      --------->YAB1     --------->YAB1          ---------->DOF2                     --------->ANAC58     >>>>>>>>>MYB98      --------->ATHB12    ----------->GT1                    <---------ZAT14    <-----------GT1     --------->ICU4      --------->DAG2                      <---------ZAT18 -----DOF2  --------->MYB52(1)        ---------->DOF2--------->ARR11(3)  ---------->DOF2   --------->ARR11(3) --YAB1  --------->YAB1 <---------ATHB12   ---------->DOF2      --------->YAB1  --------->ZAT18    <-   tggttttaacataataacgtaaaggaatcattaaaaactcaaaagaaaagttaaagacattggtattcatagaaaaaaagagtggacaaacaagatcccg  6757800                          --------->TOE2(3)                          <---------DAG2                          --------->TOE1(3)                       <-----------GT1                    --------->ARR14(2)          <-------TEIL                    <---------GLK1(2)        <---------ANAC55(2)                    <---------ARR14(2)      --------------->AtSPL3          --------->YAB1                 --------->YAB1             <---------------AtSPL8         <---------YAB1    --------            <---------ATHB12                <-------TEIL                 --------->YAB1      --------      --------->ANAC46<-------TEIL      <---------------AtSPL3           <---------ICU4      -------- ---------DOF2 ------->TEIL             <---------------AtSPL8          --------->ICU4    --------->TOE1(2)   tcttttatactccaatgaatcagattcaccttagctataatgtaagtacgtacaaagttgtgctaagacgatgaattatgatagtttattcacatacgaa  6757900  Previous    Next  AGI:  At1g19510.1    Description:  myb family transcription factor. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT1G75250.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO47617.1); contains InterPro domain Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778) Range:  from: 6756275    to: 6757368    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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