Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               ----------->RAV1(1)         <------MYB83                                                     --------->ANAC58     --------->MYB52(2)                                                   --------->ANAC46  <---------ANAC58                             --------->ZAT6             --------->ANAC58  <---------ANAC58                        --------->ANAC55(2)             --------->AtLEC2 --------DOF2          <-----------GT1    <---------ANAC55(2)      <---------------AtSPL8   <-------- ----ALFIN1        <----------DOF2      <---------ATHB12        <-----------GT1  <---------YAB1 >PCF2   <------MYB46(1)      --------->AHL20(2)        <-----------GT1<-------TEIL        --------->ANAC46   ctttgcttagttggtctgatacttttatcggttttaatatcaataagtaacacgattttcaccatttaacgagtacatgcaacacgattgtacatgtcac  6738100                                                                          <-----------GT1                                                                      <---------AHL20(2)                                                                     <---------AHL20(2)                                                                 <---------YAB1                                                               -------->ATHB1                                                               --------->YAB1                                                               <---------AHL20(2)                                                               <--------HAHB4                                --------->ZAT6                 --------->ATHB51                            --------->DOF5.7(2)                --------->AHL20(2)                 ---                           --------->TOE1(3)                  --------->ICU4              <---------ANAC46                           --------->TOE2(3)                  <---------ATHB12       <-----------RAV1(1)                           <-------GAMYB                      <---------ATHB51      <---------YAB1<--                          ------>ZmHOX2a(2)               <------ZmHOX2a(2)        <------------CBF --------->ARR11(3)    --------->YAB1        --------->AHL20(2)<---------ICU4    <---------AHL20(2) ---HVH21             <---------YAB1       --------->TOE2(3)--------->WOX13(1) <----------DOF2   <---   atttatcttggcataaatctatctatgatcgttaacacgattatacattaaaaactttggatcaattattttttattttctcttttattgttgggagtag  6738200                      <------------CBF                    <---------AHL20(2)                  <---------ICU4               <---------ICU4                                                                      --               --------->AHL20(2)                                                                  <-               <---------AHL20(1)                                                                 <--               <---------AHL20(2)                                                                 <--               --------->YAB1                                                                     ---            --------->YAB1                                                                        ---          --------->AHL20(2)                                                                      <--       --------->ATHB12                   --------->AHL20(2)                          ===============     <---------WOX13(1)   <---------TOE2(3)<---------AHL20(2)                         <--------------    <------------CBF<---------YAB1<---------ICU4                        --------->ZAT18         <----  <---------YAB1 --------->ICU4   -------->HAHB4                        <---------ZAT14      -------- ------>ZAT18  <--------ATHB1    <---------YAB1                ------------>CBF       --------------- -------ZAT18 --------->ICU4     --------->ICU4      <---------ANAC46   --------->ZAT14      <------- ------ZAT6<---------AHL20(2)  --------->YAB1      <---------ANAC46     <---------ZAT18   <---------AHL20(2)   tgttctaattgatttaataatttttattgagaataataatcgaatttaaaatgcagtgtgtattagacaattagtggacttatagaggctaatttaagta  6738300  <---------ARR14(2)  --------->ARR14(2) ------>MYB83 ------>MYB46(1) ------------->AGL15 --------MYB59        <-------TEIL ---------------AGL1  ------>ZmHOX2a(2) ---------------AGL3 <------ZmHOX2a(2) -------------->AG <------ZmHOX2a(1) -------------->AGL3--------->ARR14(2) ---------------AGL2<---------ARR14(2) ===============MADS_MADS                                                                      ------ -AGL15          <---------TOE2(3)              <------------CBF                       <---------ICU4 -------GT1     --------->YAB1               <---------ALFIN1  --------->ZAT6         <---------YAB1 ->ANAC55(2)    <---------ICU4               ----------->RAV1(1)                      --------->ICU4 >AGL15   <----------DOF2              ---------->DOF2 ----------->GT1              --------->YAB1 --ANAC55(2) --------->YAB1         <----------DOF2  ---------->DOF2               <---------YAB1   accaaatttgggctttaataaggatccatactcttcggcttgaaagcccacattgtaaagttaaaacactatatcaggctctgttttcattatggctata  6738400                        <---------ATHB12                      ------>MYB46(1)                      ------>MYB83                  <---------At4g35610                        ------                   ----------------->AG             --------->At4g35610                        ------              --------->LBD16            <---------ICU4    <---------ZAT14                    <------             --------->HSFC1(1)          --------->ATHB51  --------->ZAT14                   <-------             <---------HSFB2a(2)        --------->ICU4   <---------bZIP60(1)       ------------------             <---------HSFC1(1)         <---------YAB1   --------->bZIP60(1)    <---------ARR11(3)             --------->HSFB2a(2)      --------->YAB1--------->ZAT2              --------->ARR11(3)--- ----->TBP  <---------LBD16          <---------YAB1 <---------ZAT2             <---------CCA1(2) ----   aatacacgagtttttccagaaaccaaatcaggctctgttttcattatttctcgctgctgacttcacagacgacgatggctaatatctctgaaatttccgg  6738500                  <------ZmHOX2a(2)                 --------->ARR11(3)                 <---------ARR11(3)                 <---------ARR14(2)                 --------->AGP1                 --------->ARR14(2)                --------->GLK1(1)                <---------GLK1(1)              <------NtERF2             --------->LBD16            <---------ANAC46            <---------DEAR3(1)           <---------LBD16           <------NtERF2          ------>NtERF2          <---------RRTF1(1)          <---------RAP2.3(1)         <---------RRTF1(2)         <---------RAP2.3(3)         <---------RAP2.3(2)         <---------RAP2.6(2)       --------->MYB52(1) --------->ANAC46      ----------->HVH21   --------->ANAC58                                  --------->CCA1(2)    --------->YAB1--------->CCA1(2)                                      --------->ANAC58 >NtERF2 <---------DEAR3(1)                                              --------->ANAC46 --->LBD16<---------ERF1  --------->ANAC58                               --------->ANAC58 ---LBD16<---------DREB2C(2)                                        <----------ID1 --LBD16--------->RAP2.6(3)                                     --------->GLK1(2) --->WRI1<---------RRTF1(3)                                    <---------ARR14(2)            -------- --->NtERF2--------->ATERF1(1)                                 <---------GLK1(2)     --------->YAB1 ----->DEAR3(1)----------->ARR10                               --------->ARR14(2)  --------->GLK1(2)   cgactctaatgacggcggagatccaaacaagaaaccagaagaacaagttttgagaagaagtagaagaatcgcgacaagaaacgagaatcaaaacaagaag  6738600                                                                    <---------ANAC58                                                                    <---------ANAC58                                                                <---------ANAC58                                                                <---------ANAC58                                                               --------->HSFC1(2)                                                               --------->HSFB2a(1)                                                               <---------HSFB2a(1)                                                               <---------HSFC1(2)                                                               <---------ZAT2                                                               --------->ZAT2                                                          --------->ANAC46               <---------YAB1                                                          --------->ANAC58           <---------GLK1(1)                                                          --------->ANAC58           --------->GLK1(1)                                                          --------->ANAC55(1)       <---------ARR14(2)                                                          --------->ANAC55(2)     --------->LBD16                                                          <---------ANAC55(2)    <---------HSFB2a(2)                                                         <---------LBD16         --------->HSFB2a(2)                   <---------ARR11(3)                   --------->MYB52(1)      <---------LBD16                   --------->ARR11(3)                  ----------->HVH21   --------->ANAC58               ---------->DOF2     <----------DOF2   <---------At4g35610   --------->ANAC58      <------ZmHOX2a(1)         <---------ARR11(3)   --------->At4g35610<---------ZAT18----------->GT1 -->DOF2  >>>>>>>>>TBF1        <---------CCA1(2)     --------->ZAT2 <---------ANAC46--------->ARR14(2)   cccaaggaggaagaagaaaaagataatcgctcggtatcttttccaattccaaacgagctcacggaagcttgcgtcgcactcatccggaaatgtgattacc  6738700                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                   --                                                       --------->ANAC58                            --                                                       --------->ANAC46                            --                       <----------DOF2                 --------->ANAC58           --------->ANAC46 --                       <---------DAG2             --------->ZAT6              <----------DOF2    ----                    <-----------GT1              --------->GLK1(1)    <------NtERF2--------->LBD16<--          <---------ANAC58                 <-----------HVH21         ------>NtERF2--------->HSFB2a(2)          <---------ANAC58                 <-----------TGA1         --------->ANAC46         <-------   ctagtctatcttccgtctcaagttactttttcaatctcatcgcttcgtcagaactctacgaaacgcgttcgcgcctcggtctttccgaaacctttcttta  6738800         --------->ARR14(2)   --------->DEAR3(1)  <------NtERF2  --------->ATERF1(1) ------>NtERF2 <---------ATERF1(1) -------->RRTF1(2) -------->ANAC46 -------->DREB2C(2) -------->RAP2.3(2) -------->RAP2.6(2) -------->RAP2.3(3)                   <-------TEIL -------->DEAR3(1)           <---------ALFIN1 -------->RRTF1(3)          --------->LBD16 ------->ORA47(2)      <---------ARR14(2) ------->RRTF1(1)      --------->ARR14(2) ------->RAP2.3(1)    --------->GLK1(1) --------->KAN4(2) ------->ERF1  ----------->HVH21   ----------->GT1                           <---------At4g35610 ----->ANAC46----------->RAV1(2)  <---------------AtSPL8              <---------ANAC58           ==== -------RAP2.3(1)<<<<<<<GRF7--------->ANAC46                          <---------ANAC58           ---- ---DOF2 <---------GLK1(2) <-----------------AGL1                 <----------DOF2              <-----   cgccgccatccgattccctgacacaaatcccccaaactggtacattctccatcgaaacaaggtttcttctttacgtttgagcaaactcgaatcacttcca  6738900                               <--------ZAP1                     <-----------TGA1                    --------->TGA2(1)    <---------DAG2  <---------TGA2(1)    <---------ANAC58--------->bZIP60(1)                      --------->HSFB2a(2)    <---------ANAC46--------->ETT(2)                         <---------HSFB2a(2)    <----------DOF2 <---------bZIP60(1)               <---------ZAT14    <---------ANAC58<---------ETT(2)                  --------->ZAT14                               < ============================RAV--------->WRKY18(1)   --------->ABI4(2)                             - ------->RAV1(2) <-----------RAV1(1)       ------->TEIL      ------>ZmHOX2a(1)  <---------At4g35610 < ----ALFIN1------->TEIL        <-----------HVH21      <---------ZAT18     --------->DOF5.7(2)       -   cctgtgccttatggatgttctgtcgtcacaatcggtcaagagatgtatgtaatcggtggactcctcgatgtaagacgtttacagttgatgactctcatcg  6739000  Previous    Next  AGI:  At1g19460.1    Description:  kelch repeat-containing F-box family protein. Identical to Kelch repeat-containing protein At1g19460 [Arabidopsis Thaliana] (GB:Q3ED93;GB:Q9LN46); similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT1G19470.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71765.1); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-type beta propeller (InterPro:IPR015915); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043) Range:  from: 6738475    to: 6739725    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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