Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        ------>ZmHOX2a(2)                                                                     --------->CCA1(2)                                                                     <------ZmHOX2a(2)                                                                    --------->AGP1                                                                    <---------ARR11(3)                                                                    --------->ARR14(2)                                                                    <---------ARR14(2)                                                                    --------->ARR11(3)                                                                    --------->ARR14(3)                                                             --------->MYB52(1)                                                        ------->GAMYB--------->At4g35610                              --------->TOE1(3)       --------->At4g35610     <---------------AtSPL3                              --------->TOE2(3)       <---------At4g35610     --------------->AtSPL3                            <---------ARR11(3)       --------->MYB52(1)   ---------->DOF2   ------>MYB83                            --------->ARR11(3)    --------->ANAC58 <---------GLK1(1)        ------>MYB46(1)                    --------->ICU4                --------->ANAC58 --------->GLK1(1)      <---------MYB59                    <---------YAB1                --------->ANAC46----------->ARR10    <-----------GT1                  <---------ICU4            <---------DAG2   ----------->RAV1(1)    <----------DOF2   ---------->ID1 <--------HAHB4            <----------DOF2 --------->MYB46(3)--------------->AtSPL8 --------CCA1(2) <---------ATHB12---------->DOF2<-----------GT1 ------->GAMYB <---------------AtSPL8   catttctcgttttctctccatcatttttaaaatcttaaagaaaccacttttaacgcaactgaacaacagagatctgcaaagaagtactttaaccaaactt  6727600                                                                        <---------TOE2(3)                                                                 --------->LBD16                                                                --------->ANAC46                                                               <---------LBD16                                                             ------>ZmHOX2a(2)                                                            <------ZmHOX2a(2)                                                            --------->GLK1(1)                                                            <---------GLK1(1)                                                           <---------ARR14(2)                                                           <---------ARR14(3)                                                           --------->ARR14(2)                                                           <---------ARR11(3)                                                           --------->ARR14(3)                                                           <-----------ARR10                                                           --------->ARR11(3)     XXXXXXXXXXXXXXXXXXX                                                --------->At4g35610 --------->ANAC58                                                <---------At4g35610 --------->ANAC58                                  --------->ANAC58        <------ZmHOX2a(1) <-------TEIL    --------->ZAT2                --------->ANAC58     --------->YAB1   --------->MYB59 --------->CCA1(2) --------->GLK1(2)      <---------LBD16 <---------GLK1(2)--------->ARR11(3)   <----   gagataagctcggaggccaagaatttgatcaaaactaagcaaactctgggagctaaatcaggatctccgcaagtaaggttcttgagcacgatttagtagg  6727700                             ---------->DOF2                           --------------->AGL15                           <---------------AGL15                         --------->At4g35610                    --------->DAG2             <---------ARR14(2)         ==================================MADS_MADS                         --------->ANAC58         --------------->AGL15                                         ---------->DOF2        ----------------->AGL1                                  <---------ANAC55(2)        <-----------------AGL1                                  --------->ANAC55(2)     <---------SPL7---------->DOF2                             <---------LBD16                     <- X>MIR867----------------->AGL1           <-----------GT1   <-----------HVH21--------->ANAC58    ---- --ZmHOX2a(1)--------->ARR14(2)   ----------->GT1      --------->GLK1(1)   --------->MYB52(1)    ----   aatttgcagtacccagattggaaaagctgctaaaagaagaaaatttacaaatctcagatttctatcacgggagaaaagaacgaaacacagtagaaatttg  6727800                                                                                      --------->AHL20(1)                                                      <---------ICU4                 --------->YAB1                                               --------->MYB52(1)                    --------->AHL20(2)                           <---------TOE2(3)--------->ANAC55(2)               --------->ZAT6 --------->SPL7----------->GT1            --------->YAB1                 <---------At4g35610 --------SPL7  --------->YAB1            <---------ATHB12                --------->At4g35610   ------ ----------->AtSPL3        <---------TOE1(3)<---------ANAC55(2)  <----------DOF2  --------->YAB1 ----------->AtSPL8 --------->ICU4     --------->WOX13(1)<-----------GT1<---------TOE1(3)     -------   cagtaccccaaatcgaatcgtaaaaatttaagcttgataatcaatcacataactgaaaattacgactcttttttaagctaacactaataatattatcctc  6727900                                                                                                -----                                                                                            ---------                                                                                  <---------DAG2<----                                                                                  <----------DOF2                    --------------->AGL15                                      --------------->AGL15                    <---------ANAC46                                           <-----------GT1 <-----                    ===========================================================================MADS_MADS                    <---------ANAC58                                       <----------DOF2  <--------                    <---------ANAC58                                      <---------ANAC58 --------->ICU4      <-----------GT1                                                     <---------ANAC58 --------->AHL20(2)  <----------DOF2<-----------GT1                       >>>>>>>>>TBF1--------->GLK1(2) ----------->GT1 >ZmHOX2a(1) <----------DOF2             ---------->DOF2   --------->CCA1(2)  <-----------------AGL1 -->TOE2(3)  <---------DAG2----------->GT1    ---------->DOF2 ----------->GT1 <-----------------AG --   aatgcttttttctcacttttttccttgtatagttgaaagttgaaaaagaaaagagaagaagaaatgggaaattctggcttttcacttttggtaataaata  6728000                                                                               <---------ANAC46                                                                             --------->MYB52(1)                                                                            ----------->TGA1                                                                            ----------->HVH21                                                                            --------->ALFIN1                                                                          --------->At4g35610         --------->ALFIN1             <---------HSFB2a(2)                 <---------At4g35610 ---->YAB1                            <---------ANAC46                   <---------DEAR3(1) >AHL20(2)                     --------->ETT(1)                         <------NtERF2 -----ICU4                     *TSS  <---------LBD16                   --------->LBD16   <---------AHL20(2) ----AHL20(2)               <------MYB83  ---------->DOF2            <---------LBD16    <---------AHL20(2) -AHL20(2) <-----------HVH21<------MYB46(1)--------->DAG2         --------->MYB46(3)    --------->AHL20(2) ------->MYB52(1)           <---------MYB46(3)                   ---------->DOF2       --------->YAB1   ataactgagaagtggtcagaactcagaagttggtcgggtttcggaaaagtgccaacaagagagtcgaaacagccggaggtgacggagaattttaattttt  6728100              <------ZmHOX2a(2)             --------->ARR11(3)                                                                 <----             <---------ARR14(2)                   --------->At4g35610<-------GAMYB         <---------YAB1         <-----------------AGL1              --------->WOX13(1)    <---------YAB1<-------TEIL   <----     <----------DOF2                     ----------->GT1           <---------TOE2(3)   ------->TEIL   ggtctctctttaacagatcaggcattaagcccaaatggatttgaagtaaatcagcccaatgggctcattacggttgtacaatatacatgaatgttgatta  6728200                                                     --------->AHL20(2)                                                 ----------->GT1                                               <---------ANAC58                                               <---------ANAC46          <---------ICU4                       <---------ANAC55(1)          <---------AHL20(2)                   --------->ANAC55(2)         --------->AHL20(2)                    <---------ANAC55(2)         --------->ICU4                        <---------ANAC58    --------->ANAC55(2)                       --------->MYB52(2)                            ---------    ----------->GT1                    <-----------RAV1(1)                     --------->TOE2(3)----- -------------AGL1          --------->ATHB12 <-----------GT1         <---------YAB1        <---------ATHB12 -------------AG            <---------ICU4<---------MYB46(3) ---------->DOF2<---------GLK1(1)--------   ctgtataggtaataaatacacagtaatgcatcatttcatcactgttgttacttgttaaaattcgaaagagcataatagaaatctcaacttccaatgagat  6728300                                                                                    <---------YAB1                                                                                  --------->YAB1                                                                       <---------ANAC58                                                                       <---------ANAC58                                                                     <---------ARR11(3)                                                                    --------->GLK1(1)                                                                    <---------RVE1(1)                                                                    <---------CCA1(1)                                                                    --------->CCA1(1)                        --------->AHL20(2)                          --------->RVE1(1)                        <---------AHL20(2)                          <---------GLK1(1)                       --------->AHL20(1)                    --------->ZAT6<---------ANAC58                       --------->AHL20(2)                <---------MYB52(1)<---------ANAC58 >YAB1  --------->AHL20(2)                       <---------ICU4    --------->ARR11(3)               - ---->CCA1(2)          <---------AHL20(2)       <---------YAB1     <---------ARR11(3)         <------ --->ARR10             <---------AHL20(1)---------->DOF2<-------GAMYB--------->ARR11(3)     <--------   ttggattccataaattttgccacaatttatttagaactcacaacaaagtcaacattgctgttaactctagatatcttgcttcaattacaatagtctttac  6728400                        <----------DOF2            <-----------GT1                     <-----------GT1          <---------YAB1       <---------ARR11(3)              --------->ANAC55(2) ------>ZmHOX2a(1)<---------AHL20(2)   <---------ANAC58 <----------DOF2 <---------AHL20(1)    <---------ANAC55(1)                                        --- -------->TOE2(3)--------->AHL20(2)    <---------ANAC55(2)           <----------DOF2     <----------DOF2 -----GT1        <---------AHL20(2)    <---------ANAC46     <-----------GT1             <---------ANAC58 --DOF2--------->ARR11(3)              <---------ANAC58   --------->YAB1                <---------ANAC58   atcctttaaaatctttcaatttttttctttattcatacattacttgttctgattttcccattatactactcctttctatttcaaactcttgctttctgtc  6728500  Previous    Next  AGI:  At1g19430.1    Description:  dehydration-responsive protein-related. similar to dehydration-responsive protein-related [Arabidopsis thaliana] (TAIR:AT5G64030.1); similar to hypothetical protein OsI_013250 [Oryza sativa (indica cultivar-group)] (GB:EAY92017.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75692.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61160.1); contains InterPro domain Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159) Range:  from: 6724564    to: 6728031    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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