Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <---------AHL20(2)       --------->AHL20(2) ---------CCA1(2) -NtERF2 >NtERF2 --->ATERF1(1) -->RAP2.6(2) ---RAP2.3(1) ---ATERF1(1) ---ERF1 --ANAC58 --DEAR3(1) --RAP2.3(2) ->ATERF1(2) --ATERF1(2)           <---------ZAT18            <---------ANAC58 --ANAC58              <---------ZAT14            <---------ANAC58 --RAP2.6(2)           --------->ZAT18            <---------ANAC46   <---------YAB1 --RAP2.3(3)         --------->ZAT14           <---------ARR14(2)   <---------ARR11(3) --RRTF1(3)          <---------ZAT18        <---------TOE2(3)       <---------AHL20(1)         ------ --RRTF1(2)          --------->ZAT18        --------->MYB59 <---------MYB52(2)               <------- --DREB2C(2)      ---------->DOF2           <---------TOE1(3) --------->MYB52(1)    <-----------GT1 >RAP2.6(3)       <xxxxxxxxxxxxxxxxsmallRNA(s) --------->ARR14(2)   --------->AHL20(1)       --------   ccatattttttaaatagcccaagagcacactatgccattttcgttttaggttccgtccaaaaactaacaatatttttgtcgaagtttttcattttgatct  6721000                                                                           <---------YAB1                                                                      --------->AHL20(2)                                                                     <---------AHL20(2)                                                                     --------->AHL20(2)                                                                     <---------AHL20(1)                                                               --------->ANAC58                                                               --------->ANAC58      ----------->GT1    <----------DOF2                                          <-----------GT1     --------->HSFB2a(2) >ZmHOX2a(2)                                      <-----------RAV1(1)--------->AHL20(1) --ARR11(3)                          <----------DOF2<---------MYB52(1)<---------AHL20(2)   --------->ARR11(3) ->ARR11(3)                  <-----------GT1  <---------CCA1(2)--------->ANAC46  <---------HSFB2a(2)   tatactctttttttgtcatttggagtttttgttacatttctttttcttatatctgttgttttttaacgcaatttattttgattctagtagttaaatcttg  6721100                                                                          <-----------GT1                                                                        <---------AHL20(2)                                                                        --------->AHL20(2)                                          <---------AHL20(2)         ------>MYB46(1)                                          --------->AHL20(1)         ------>MYB83                 <----------DOF2          --------->AHL20(2)       <---------MYB59                 ------>ZmHOX2a(1)       --------->AHL20(2)        --------->TOE2(3)            --------->YAB1               <---------AHL20(2)--------->AHL20(2)         --------->YAB1              --------->ICU4        --------->AHL20(1)        <---------AHL20(2)         --------->YAB1          <---------AHL20(2)        <---------ANAC58       <---------AHL20(2)         --------->AHL20(2)      --------->AHL20(2)         <---------ANAC46       --------->AHL20(2)       --------->YAB1----------->GT1   <-----------GT1      <---------ANAC58   tattcattttttaataatccttttggtaactcaaaaataaaaattaaattgaaaaaaaaaaaaaattaacctaatttaacatgtttatcgtgtatgccaa  6721200                                                                                 <----------ID1                                                ------>MYB83                 --------->YAB1         <                                                ------>MYB46(1)            <---------YAB1           <                                              <---------MYB59          --------->TOE1(3)        <----                        ------>ZmHOX2a(1)  <-----------GT1             --------->TOE2(3)   <--------ATHB1                --------->bZIP60(1)   --------->ICU4                 <---------YAB1     --------->YAB1                <---------bZIP60(1) ---------->DOF2   <---------MYB52(1)------>ZmHOX2a(1)  <---------ICU4   acttattttgaaattgggatgtcatcctcttagttacacaaagattaacctacttcgttaagtcttatattatccttaatattaagacaagaataattct  6721300                                                                                 --------->TOE1(3)                                                                                 --------->TOE2(3)                                                                                ----------->RAV1(2)             --------->ANAC58                                                   <---------ANAC46       <----------DOF2                                                          <---------ANAC55(2)       ------>ZmHOX2a(1)                                                     --------->DOF5.7(2)      --------------->AGL15                                                  <---------MYB52(1)      <---------------AGL15                                             --------->YAB1     ----------------->AGL1                                       --------->ARR11(3)   <---------ZAT18                                                <---------ARR11(3)   --------->ZAT18                                             <---------GLK1(2)--------->At4g35610 ---------ANAC58                                     <---------ANAC46  <---------YAB1         ------- ---------ANAC58    ---------->DOF2      <---------GLK1(2) ---------->DOF2 <---------ICU4     ------- ------DOF2  --------->ANAC58<-----------GT1         ----------->GT1 --------->WOX13(1) --------->AtMYB61   ttgagtgtccttttcaagtaaacaaagaatataacttgatatagattatttgatggagtataaaagaatatctatcatcgttacctgaaaccaaaacata  6721400                                                            --------->YAB1                                                         --------->YAB1                --------->ALFIN1                                                         <---------ICU4               --------->LBD16                        ---------->DOF2                <---------AHL20(2)            xxxxxxxxxxxxxxxx          --------->ANAC46*TSS                      --------->ICU4 <-----------GT1-------->P  <xxxxxx -->TOE2(2)        --------->DAG2   <---------AHL20(2) <---------YAB1          <---------MYB52(2) -->TOE1(2)       ---------->DOF2  --------->AHL20(2) --------->TOE2(3)      <<<<<<<ZML2  -----------   agaaaaccatatacaaaactaaaagtaaaagcatagatttatttcatctatggaaatattaatgacaatttactcactagaactaacccgtgggctaaaa  6721500                            ---------->DOF2                          <---------YAB1                       --------->GLK1(2)                      <---------GLK1(2)                      --------->ARR11(3)                                                            <                      --------->ARR14(2)                                                           <-                      <---------ARR11(3)                                                           --                      <---------ARR14(2)                <---------HSFB2a(2)                        --                     --------->HSFB2a(1)                --------->HSFB2a(2)                       ---                     <---------HSFB2a(1)             <---------MYB52(1)  --------->ANAC58         <--                     --------->HSFC1(2)            <---------ANAC58      --------->ANAC58 ----------- xxxxxxx>smallRNA(l2)<---------HSFC1(2)            <---------ANAC58      --------->ANAC46 ------>NtERF2 xxxxxxxxxxxxxxxxxsmallRNA(se3)                 <-----------GT1      --------->YAB1      <---------ETT(1) >GT1  <------NtERF2----------->ARR10       <---------MYB52(1)    <----------DOF2        ----------->HVH21   tgtgatggctgcaatctaggcgaagattcttatagcgaagggtatcgttgtttccgttctggactcttctttcataagcaatgctcccgctccgacatag  6721600     <---------ICU4     <---------GLK1(2)  --------->TOE2(3) <-------TEIL ------ZmHOX2a(2)                                                <---------AtLEC2 --------ARR11(3)                                           <---------ARR14(2)           ----------->GT1 ------->ARR11(3)                                           --------->ARR14(2)          <---------ZAT6 ------->AGP1        ----------->RAV1(1)       --------->At4g35610                  --------->REM1(2) ------>GLK1(1)     --------->ANAC46       --------->MYB111(1)  <-------TEIL     <----------DOF2    - -------GLK1(1)   --------->ANAC46    ---------->DOF2      --------->At4g35610--------->ANAC58<------ >RAV1(1)     --------->YAB1    <---------AtLEC2           <---------At4g35610--------->ANAC58<------   agatccataatctctatcatccacaacattctttgcatatcaaagtagttgctgcaaatgcagatgtgcatgaaaaatgcaagctttgtagaggtaactt  6721700                                                       --------->ANAC58                                                       --------->ANAC58         ---------->DOF2                                             <------MYB46(1)         <---------ICU4              ---- --------->DOF2                              <------MYB83 ---------->DOF2 <---------YAB1         <--- ---ANAC58  <---------YAB1     <----------DOF2     --------->ANAC46 --------->ICU4           -------- ---ANAC58<-----------GT1  ----------->HVH21--------->MYB59         <---------YAB1         --------->PCF2   gccaaagatgtattactattgttctacatgtgactttgctatcgatttggtatgcgcaagaaaagaagtcattcttacaattgaaagtctagagacccac  6721800                                                               --------->ATHB12                                                              <---------YAB1          <---------DAG2                                     <---------ANAC58     <----------DOF2       ------->TEIL                           <-------GAMYB                  <---------WOX13(1)   <---------AtLEC2                          ----------->GT1                <---------ANAC58    <---------YAB1 --->PIF5                 <---------MYB46(3)       --------->ZAT18------>ZmHOX2a(2) ------->TEIL ----PIF5   <---------ANAC55(2)      <---------ANAC58    <---------ANAC58 ------>ZmHOX2a(1) ->TOE1(2)  --------->ANAC55(2)<---------YAB1      <---------ZAT14===============HOX2a_HOX2a   gagcatcgtttatcacttattccaaagatggttatgtttacttgttctctatgtggactgcttgatgatcggtttccttatgcatgtaccttatgcaata  6721900  Previous    Next  AGI:  At1g19420.1    Description:  pseudogene, CHP-rich zinc finger protein Range:  from: 6721426    to: 6723921    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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