Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       <---------ANAC46                                            --------->ARR14(2)                                            <---------ARR14(2)                                  -----                                            ------->TEIL                                      <------                                            <-----------ARR10                                 <------                                           <---------CCA1(2)                               <---------SPL7                                         <---------ANAC55(2)                           --------->ANAC58                                         --------->ANAC55(2)                           --------->ANAC46 -------->MYB52(1)    <---------MYB46(3) --------->ANAC46                              --------->ANAC58 ->GT1       <-------TEIL         <-------TEIL     --------------->AGL15          <----------ARF1 <--   acaaaccgtatgagattcatcgagtagttgaaaagattcatctacgtatctcactccttgtagtagcaagtttttcagagatggaagacaagccatacga  6716000        --------->YAB1     --------->YAB1                                       --------->ANAC46                          -   -------->P                                             --------->ANAC55(1)                      -- --------->MYB46(3)                                       --------->ANAC58                    <------ZmHOX2a(1) ---->ANAC46                                              --------->ANAC58                   -------- ---TOE1(1)                                               --------->AtLEC2                  <-------- ---TOE2(1)                --------->ZAT18             <---------REM1(2)            <---------AtLEC2< ----ZmHOX2a(1)            <---------ZAT14      <-----------RAV1(2)            <---------ARR14(2)----   ggaacaaccatgagaattgcataagagagtgcaagggtctcgagcgatttgcaggtgtacacgcaaaatggcaatgtagcaaatttgtatggatgaggat  6716100       --------->YAB1<---------ALFIN1      <---------ATHB12    --------->WOX13(1)  <---------YAB1   <---------ALFIN1 -------->YAB1    --------->LBD16       <----------DOF2 ------->ICU4    --------->ANAC58     <---------At4g35610                                          -- --->GT1         --------->ANAC58     --------->At4g35610 <---------ARR11(3)  --------->DAG2       -- -TOE2(3)---------->DOF2       <---------ARR14(2)         --------->ARR11(3)  <---------------AtSPL8 ---------ICU4  <---------LBD16--------->ARR14(2)        <---------GLK1(1)   ---------->DOF2   ------ ----->YAB1 --------->At4g35610--------->GLK1(2)         <---------CCA1(2)----------->GT1      ------   aataatcaatgaaaagctcccgcacacagtgagaaactgcagcttcaacgcatagtttgatatcttctggttgaaatggtaaagtactaaacttgagagg  6716200         <---------ARR14(2)         --------->ARR14(2)      <---------HSFB2a(2)      --------->HSFB2a(2)      --------------->AGL15      <---------------AGL15     ----------------->AG     ----------------->AGL1     <-----------------AGL1                                              <------MYB46(1)     <-----------------AGL2                                       <-------GAMYB     ----------------->AGL2  <------NtERF2                       <---------MYB46(3)            ------  <----------DOF2         <---------At4g35610                 --------->LBD16                 <------ ------->ANAC58 --------->GLK1(1)        <---------YAB1       ------>NtERF2        <---------ANAC46 ------->ANAC58--------->ARR14(2)     ------>ZmHOX2a(1)      <---------DEAR3(1)  <-----------HVH21 --->ANAC58  --------->LBD16--------->RAP2.6(2)             <---------LBD16     <-----------RAV1(1) --->ANAC58<---------LBD16--------->At4g35610          --------->ARR14(2)<------MYB83<------NtERF2   caagctttccaaaaccggaactctatgtagcggcaatgtccttctgataaaacgtcgaaacctccggcgattggaaggtttagtgtcgcggtcttcatca  6716300                            <---------HSFC1(2)                            <---------HSFB2a(1)                      ---------->DOF2                    --------->MYB46(3)                   --------->ANAC58                   --------->ANAC58                --------->LBD16               --------->ANAC58               --------->ANAC58                                                          --------->ARR11(3)               --------->ANAC46                                                       --------->AHL20(2)               --------->ANAC55(1)                                                 --------->YAB1              <---------LBD16       <-------MYC3                                   ----------->GT1---              --------->MYB46(3) <---------ALFIN1                     <---------MYB46(3) <---------ARR11(3)      <----------DOF2------->GAMYB  ------->MYC3                   <----------DOF2----------->GT1 --- --->YAB1   --------->PCF2  --------->HSFB2a(1)         <-----------HVH21         --------->ICU4  --- ---YAB1    ------>NtERF2   --------->HSFC1(2)        <---------ZAT6  <-----------RAV1(1)<-----------ARR10   tactcaagctttggcacccgcaaccaaagaaacttccacgtttagacaaaatgctagtggtcacagcaacttttgttggaagaaatgataaaatcttcac  6716400                           <---------ARR14(2)                           --------->ARR14(2)                           --------->ARR11(3)                           <---------ARR11(1)                           <---------ARR11(3)                          <---------CCA1(2)                        --------------->AGL15                        <---------------AGL15                                                    <---        <---------ICU4 ----------------->AG                                                     <----       --------->ICU4  ----------------->AGL1  <---------AHL20(2)                               <----  --------->ANAC58 <----------DOF2           <---------RVE1(1)                                  -----  --------->ANAC58------>ZmHOX2a(2)         <---------ARR11(3)                            ----------- ------>ANAC46    ================================HOX2a_HOX2a                  ----------->RAV1(1) ------>ANAC58  <---------ARR11(3)         <------ZmHOX2a(1)--------->ETT(2)  <----------ID1    ----- ------>ANAC58  --------->ARR11(3)      <---------LBD16     --------->ZAT18  <---------------------WRI1   cagcaagtcatcagtattgatcttttccatatcttgaaaatttcaggatttttttttttttgtggacagaaacaccgagagcgacaaaaacagagtaaat  6716500                                                  <---------ANAC46                                                 <------NtERF2                                                <---------MYB46(3)                                             <---------ANAC58                                             <---------ANAC58                                             <---------ANAC46                                           <------MYB46(1)                                           <------MYB83                                          --------->ALFIN1           >>>>>>>>>>DREB2A                                         --------->ALFIN1            >>>>>>>>>>DREB1A                                       --------->HSFC1(2)           ------->GAMYB  <---------ANAC58                                       <---------HSFC1(2)           --------->At1g77200                              <------------CBF <---------AtMYB61    <---------ETT(1)--------->LBD16 ------ICU4             <------------CBF <--------P      --------->ARR11(3)        <---------ANAC58 -----AHL20(2)       ------------>CBF  --------->HSFB2a(1)<---------RVE1(1)        <---------ANAC46 -----ATHB51        --------->ANAC58   <---------HSFB2a(1)<---------CCA1(1)       <---------LBD16 ---->ICU4          --------->ANAC58   <------MYB83      <---------ARR11(3)     <-----------GT1------ >GT1    --------->MYB52(1) --------->ARR11(3) --------->ALFIN1    --------->DEAR3(2)  <-----------TBP ---->AHL20(2)    ---------->DOF2      <------MYB46(1) ----------->ARR10  ----------->GT1  <---------AHL20(2)   aattagagagcaaacggtgcaaaagcaattgatattgtggaaggttggggtgggggtgagatattttctaccgacaaggttatttccgtatatataatgg  6716600                                                  <---------WRKY12                                                  <---------WRKY38(1)                                                  <---------WRKY45                        --------->ARR11(3)                                                 --------->WRKY18(1)             <---------ANAC46          --------->ZAT18              <---------AHL20(2)                        <---------ANAC58          <---------ZAT14              --------->AHL20(2)                        <---------ANAC58 ----->GT1<---------ZAT18            <-----------TBP                  <----------DOF2     <---------ARR11(3)   aaaataagagagtgctcaaacgtcgttttatttttctgaatttatattctggtcaaagtttgtattcgatgtctttctatatttcttgggaagatgtttt  6716700                                        --------->AHL20(2)                                        <---------AHL20(2)                                       --------->AHL20(2)                                       <---------AHL20(2)                                   <---------YAB1                                             <------                                  <---------ARR11(3)      <---------ARR14(2)                 <-------        --------->AHL20(2)        --------->ARR11(3)  <-------TEIL             <---------ANAC58        <---------AHL20(2)      ----------->GT1   --------->DAG2               <---------ANAC46  <---       --------->YAB1  <------ZmHOX2a(1)--------->AHL20(1)--------->ARR14(2)   <---------ANAC58<-----       --------->AHL20(2)     ---------->DOF2    ---------->DOF2    <----------DOF2      ----------->GT1   ttttgggaattaaaatgtgtgtttaggaactaaaaagataattaaattacaaaaagttcatattcgatgtctttctatatttcttgggaaaatgtttatt  6716800                                                       <-------TEIL         <---------AHL20(2)                        --------->DAG2                        --------->TOE1(3)         --------->AHL20(2)              <---------AHL20(1)                       --------->ANAC58        --------->YAB1                   --------->AHL20(1)                       --------->ANAC46        --------->AHL20(2)               --------->AHL20(2)                   --------->ANAC58 -----------AGL3                         <---------AHL20(2)                   --------->ANAC58 --AHL20(2)                             <---------AHL20(2)           --------->ICU4      --------->TOE2(3) ------AHL20(2)                         --------->AHL20(2)<---------At4g35610<---------ICU4 ----------AGL15                 ----------->GT1  ---------->DOF2  --------->YAB1 --------->ANAC58   tttttgggaattaaaatgtgtgtttgggaactaaatagataattaaatttcaaaaagttcatctacttgtaataactaataagcacgacaaccttaattg  6716900  Previous    Next  AGI:  At1g19410.1    Description:  similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G62970.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63564.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain FBD (InterPro:IPR013596) Range:  from: 6714483    to: 6716430    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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