Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                                                                                   --                                                                             ------->GAMYB        <--                                                                             --------->YAB1       <--                                                                            <---------MYB55(2)    ---                                                      <---------YAB1        --------->MYB46(3)   ----                                                    --------->YAB1          <---------ATHB12     ----        --------->WRKY38(1)                    --------->MYB46(3)          ------>MYB46(1)    ------>ZmHOX2a(2) ----ICU4               <---------YAB1    <---------ICU4                   ------>MYB83 <-------GAMYB --->YAB1             --------->YAB1      --------->YAB1                   -------->P  <---------MYB46(3) ---ATHB12  --------->YAB1            --------->WRKY38(1)        <---------MYB46(3) ------->GAMYB---- >WOX13(1) <---------YAB1--------->YAB1  <---------YAB1--------->YAB1   ------>ZmHOX2a(2) --------->WRKY12   tcaactctcgttgatcatagccacttatcatcaactctcgttgatcataaccacttatcatcaacgcttgttgatccaaccatcaacgctcgttgatcca  6710600                     --------->YAB1        ------->GAMYB         --------->YAB1        ------->GAMYB                     ------->GAMYB         --------->YAB1        ------->GAMYB         --------->YAB1                    --------->MYB46(3)    <---------MYB55(2)    --------->MYB46(3)    <---------ATHB12      ------->GAMYB <---------MYB55(2)    --------->MYB46(3)    <---------ATHB12      --------->MYB46(3) ------->YAB1       <---------ATHB12      <---------ATHB12      <---------MYB55(2)    <---------MYB55(2) ----->GAMYB       -------->P            ------>MYB83          ------>MYB83          ------>MYB46(1) -------ATHB12     ------>MYB46(1)       ------>MYB46(1)       -------->P            -------->P -------MYB55(2)   ------>MYB83       ------>ZmHOX2a(2)     ------>ZmHOX2a(2)     ------>ZmHOX2a(2) ------>MYB46(3)------>ZmHOX2a(2) --------->WRKY12      --------->WRKY12    <-------GAMYB           - ---->P   <-------GAMYB         <-------GAMYB         <-------GAMYB        <---------MYB46(3)     <-- -->MYB46(1)--------->WRKY12   <---------MYB46(3) ------->GAMYB------>MYB46(1)--------->WRKY12------- -->MYB83<---------MYB46(3) ------->GAMYB-------->P  <---------MYB46(3) ------->GAMYB------>MYB83<---   accatcaacgctcgttgatccaaccatcaacgctcgttgatccaaccatcaacgctcgttgatccaaccatcaacgctcgttgatccaaccatcaacgct  6710700         ------->GAMYB         --------->YAB1        --------->YAB1        ------->GAMYB         ----         --------->YAB1        ------->GAMYB         ------->GAMYB         --------->YAB1        ----        <---------ATHB12      --------->MYB46(3)    --------->MYB46(3)    <---------ATHB12      <----        --------->MYB46(3)    <---------ATHB12      <---------MYB55(2)    --------->MYB46(3)    -----        <---------MYB55(2)    <---------MYB55(2)    <---------ATHB12      <---------MYB55(2)    <----       ------>MYB83          ------>MYB83          -------->P            -------->P            ------       -------->P            -------->P            ------>MYB83          ------>MYB46(1)       ------    ------>ZmHOX2a(2)     ------>ZmHOX2a(2)     ------>ZmHOX2a(2)     ------>ZmHOX2a(2)     ------>ZmHOX2a(2) -------->WRKY12    <-------GAMYB         <-------GAMYB         <-------GAMYB           --------->WRKY12 -----GAMYB        <---------MYB46(3)    <---------MYB46(3)    <---------MYB46(3)     <-------GAMYB >GAMYB------>MYB46(1)--------->WRKY12------->GAMYB------>MYB46(1)--------->WRKY12------->GAMYB------ ------MYB46(3) ------->GAMYB------>MYB46(1)--------->WRKY12------->GAMYB------>MYB83<---------MYB46(3)   cgttgatccaaccatcaacgctcgttgatccaaccatcaacgctcgttgatccaaccatcaacgctcgttgatccaaccatcaacgctcgttgatccaac  6710800    ------->GAMYB                                          -------->P                --------->YAB1 --->GAMYB                                                <-----------GT1           --------->ICU4 ----->YAB1       <---------ATHB12                      <---------ATHB12            <---------ATHB12 -----ATHB12     --------->ANAC46                       --------->MYB46(3)        --------->YAB1 ---->MYB46(3)  --------->WOX13(1)   <---------ATHB12  --------->ANAC46       --------->TOE2(3)   --- -----MYB55(2)------>ZmHOX2a(2)     --------->ANAC46------>ZmHOX2a(2)   <---------ICU4          <---- >MYB46(1)--------->WRKY12         --------->WOX13(1) --------->WOX13(1)--------->YAB1         <----- -->P   <-------GAMYB            ------>ZmHOX2a(2)  ------------>CBF   <---------YAB1<---------ICU4 >MYB83<---------MYB46(3)    --------->WRKY12   --------->WRKY12    --------->WRKY38(1)     ------->GAMYB   catcaacgctcgttgatccaatcaactctcgttgatccaatcaactctcgttgatccaatcaacccctcgttgatcataacctctaatcatcaacgctcg  6710900                                                                                --------->ZAT6  ------>ZmHOX2a(2)                                                           <-----------GT1 ------>WRKY12                          --------->TOE2(3)                    <-----------GT1 ---GAMYB                  ---------->DOF2             <---------ZAT6    --------->ARR11(3) ----MYB46(3)            <---------AHL20(2)         *TSS                 <---------ARR11(3)   ttgatccagttatcaactctcgttgatttaaaagagaaggaaccttgattttagttagtgttatctatctccatagattttaacacttgtacaggttttt  6711000                                                                                               ------                                                                                               <-----                                                                                        <---------ANAC46                                                                                        <---------AtLEC2                                                                                        <---------ANAC58                                                                                        <---------ANAC58                                                                                     <----------DOF2                                                                                 --------->ZAT18                                                                                 <-------TEIL  <-----                                                                              <---------At4g35610                                                                              <---------ZAT2   <-----                                                      --------------->AtSPL8  --------->At4g35610                                                      <---------------AtSPL8<-----------RAV1(2)------                 ---------->DOF2                   --------->ARR14(2)    ----------->HVH21     ------      <----------DOF2          ------->TEIL        <---------ARR14(2) ----------------->AGL1   ------    <---------At4g35610     <---------REM1(1) --------->ALFIN1   <----------DOF2 <---------ZAT18<----   tgtttgagctttcaaactgaaaagaaacagatgtaccaaaaacacagagaggggattttgtacatgacttttgccatgacaggtgcgcttgcttggcagg  6711100                                                                   >>>>>>>>>GT-1                                                                <------MYB83                                                                <------MYB46(1)                                                                <---------MYB46(3)                                                                ----------->GT1                                                               <---------AtMYB61                                                              <--------P                                                             <-------GAMYB                                                         <---------TOE2(1)                                                         <---------TOE1(1)                                                       --------->CCA1(2)                     <-------TEIL                     <---------SPL7                    --------->CCA1(2)                <------MYB83<-------GAMYB --->ANAC58  <---------AHL20(2)                      <---------HSFC1(2) -MYB46(1)--------->YAB1                             --------->HSFB2a(1) -MYB83<----------DOF2              <---------LBD16  <---------HSFB2a(1)              --------->LBD16 ----At4g35610     --------->ARR11(3)                <------MYB46(1)                 --------->ANAC46 --->ANAC58  --------->YAB1        <---------ANAC46  --------->HSFC1(2)             <---------LBD16 --->bZIP60(2)     --------->ARR11(1)   <---------ANAC46<-------TEIL           <----------DOF2 --->At4g35610 ---------->DOF2     <---------ANAC58 <---------------AtSPL8 <----------DOF2 -------HVH21--------->AHL20(2)    <---------ANAC58 ----------->ARR10   <-----------GT1             -   tcacaaaccctttaataaaaagatacagtttttggtttcgtggagggatgagggaaggtacggggttggttaataaactttctttgcccggctctctctc  6711200                                                            <------------ATHB5                                                            --------->ATHB51                                                            <--------ATHB1                                                            --------->ATHB12                                                            <---------ICU4                                                            -------->ATHB1                                                           <---------ATHB51                    <---------ANAC58                       <---------YAB1             <---------ZAT14                               --------->ICU4        <---------ANAC58                           --------->ANAC46                               <--        --------->ALFIN1                         --------->ANAC46                                 <--        <---------ANAC58                      <---------ZAT14                            <---------YAB1  ------>ZmHOX2a(1) <---------ANAC46          <---------REM1(2)               <---------ZAT18     <-- ---------->RAV1(2) <---------ANAC58          --------->ZAT14    <---------TOE2(3)<----------DOF2 <--   cctcctgaatgtgtgtctactgtcttgtttcatatgcttcttgcatactacacagaccacaattattgaggcatcacttgtgctctttaatatgcttctt  6711300           ------>ZmHOX2a(2)       <---------YAB1 <-------MYC3 <-------PIF4 ------->MYC4 ------->PIF4 ------->MYC3 <-------MYC2 ------->PIF5 <-------PIF5                                                                        <---------At4g35610 ------->MYC2                                     <---------YAB1           <---------AHL20(2) -------ANAC46                              --------->ICU4             ----------->GT1 -------ANAC58                          --------->ARR11(3)            --------->ARR11(3) -------AtLEC2                          <---------ARR11(3)            <---------ARR11(3)      <------ -------ANAC58                        <---------TOE2(3)        ------>ZmHOX2a(1)  <---------MYB52(1)   gcatgtgctatgatcgaagaacattgagtttctaatgaccaaggtattgattatgttttcttatcctgttgagatgtttaatctgtttgctcatattttt  6711400                    --------->ANAC58                    --------->ANAC58                    <---------ANAC55(2)                    --------->ANAC55(2)                   <-------TEIL                   --------->SPL7                                                    <------MYB83                 <---------SPL7                                                      <---------DEAR3(2)               --------------->AtSPL8                                                <------MYB46(1)               <---------------AtSPL8                                               <---------AtMYB61               <---------------AtSPL3                                               <---------MYB46(3)            <---------At4g35610                                                     --------->MYB59            --------->ZAT2                                                         <--------P            <---------ZAT2                                                     <------ZmHOX2a(1)          --------->ZAT18                  <------ZmHOX2a(1)    --------->TOE1(3)<---------MYB46(3) ---AHL20(2)--------->At4g35610     ---------->DOF2            ----------->RAV1(2)<-------GAMYB  <---   tcagaaacagagtgagcagggtacgttatagtctcattcaaagtaggacaatggaatatagtctaacctgaagaattgttaggaggttggtccctgtgga  6711500  Previous    Next  AGI:  At1g19394.1    Description:  unknown protein Range:  from: 6709764    to: 6710661    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g19397.1    Description:  unknown protein Range:  from: 6710952    to: 6711778    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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