Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         ----------->GT1 ------>ANAC58                                                      ------->TEIL           ---------- ------>ANAC58                        <---------MYB52(1)<---------TOE2(3)          <-----------GT1   aagcattctctgagtttctcattcactcgtgaacacatctgttatgtcttaaactgttgagattgtaatgaaccagtgaattagttaactatacaaagag  6697600                                                                                 --------->ANAC58                                --------->AHL20(2)                               --------->ANAC58                              <----------DOF2                                   --------->SPL7                        <---------ARR14(2)               ---------->DOF2     ------->GAMYB                        <-----------GT1     --------->RAP2.6(3)            <---------At5g28300                        --------->ARR14(2) <---------ARR14(2)             --------->MYB52(1)        -                     <---------REM1(1)     --------->MYB52(1)             <-----------GT1          <-                 <-----------RAV1(2)       --------->ARR14(2)<------ZmHOX2a(1) <---------MYB52(1)---- >DOF2<-------TEIL   --------->ALFIN1   <---------------AtSPL3    --------->At4g35610           <----   tagacacatacatctttggacaggtgtaacctcttttaatatgaagaacggctacattgaaaaggatgaactgaagtaaccgtaagccaaaacatccaat  6697700                                           <---------ICU4                                           <--------ATHB1                              <---------ZAT6    <-----------GT1  <---------ANAC58        <----------DOF2 <---------AHL20(2) --------->YAB1        <---------ANAC58           --------- -------->YAB1         --------->AHL20(2) <---------ATHB51     <-----------GT1             <---------ICU4 --------YAB1          <---------AHL20(2) <---------ATHB12--------->AHL20(2)               --------->ATHB12 ----->YAB1           <---------YAB1--------->YAB1        <---------AHL20(2)               --------->YAB1 -----ATHB12     ----------->GT1   <---------YAB1       <----------DOF2                   <---------ATHB12   gataataagacttttgttctggttattaattagtcttataatcaataattctacagttctttaattttcgtttccaagttccaaagttttaaatcattag  6697800                                           --------->AHL20(2)                            <---------ANAC46       --------->ANAC46                             <----                            <---------ANAC58      <---------TOE2(3)                      --------->DEAR3(1)                            <---------ANAC58   <---------AHL20(2)                      <---------At5g28300                  ------->MYC3          <----------DOF2                              --------->MYB46(3) >TOE2(3)         <-------MYC3        ---------->ID1  ---------->DOF2              <-----------GT1   actttggtcagactataaaacgtgttcaaggcttgtgtttgtcttttatataaacgtaaagactgtttggacatgaagacttatttatccaccgtctgga  6697900                                                                                          ===========                                                                                          <----------DOF2                                                                                         <---------ANAC58                                                                                         <---------ANAC58                                                                                  <----------DOF2                   --------->ATHB12                                               ===================                   --------->YAB1                                            <---------At4g35610                  <---------YAB1     --------->YAB1                  --------->ANAC58    <---------ANAC46              --------->AHL20(2)    --------->ICU4                   --------->ANAC46 <---------RAP2.6(2)      --------->ANAC46            --------->YAB1                     --------->ANAC58 ---------->ID1    <---------ALFIN1              <---------------AGL15         <---------WRKY38(1) <-----------RAV1(1)   <---------REM1(2)             ----------------->AGL3    ---------->DOF2 <---------WRKY38(1) -----GLK1(2) <---------AHL20(2)------>NtERF2        <---------MYB52(1)    <---------WRKY12   ttatctacacacctaaaaaaatgatagcaatcgcagccataataagagagaacgcgttagtaaaagtcaacacgaagtcaactcctttgtggcttttagc  6698000         ---------->ID1     <---------TGA1a     --------->TGA1a     <---------O2                                *TSS     --------->O2<---------AHL20(2)     ------>MYB46(1)     ----------->RAV1(2)                ------>MYB83                    ------>ZmHOX2a(1)   <---------ALFIN1----------->GT1    <---------MYB59                 ------>ZmHOX2a(2) ==============bZIP_DOF            <-----------GT1        <----------DOF2 ==============bZIP_DOF         <---------ICU4  ---------->DOF2     --------->ARR11(3)        <------   ccatcccacttggcgctatttaagtaaaatcccagtattaccaacttcaaaaaagtctctctttcacattgatcctgtgttttataaaaccgaattttga  6698100                                                                                     <---------MYB46(3)                                                                              --------->ARR14(2)                                                                              <---------ARR14(2)        --------->At4g35610                                              --------->ANAC58        --------->ZAT2                                                   ------->GAMYB     <------ZmHOX2a(2)                                                   --------->ANAC58    --------->ARR11(3)                                                   --------->RAP2.6(2)   <-----    <---------ARR11(3)                                     <-----------------AGL3    ----------->GT1   <---------GLK1(1)                                     --------->GLK1(2)--------->LBD16   ---------   --------->GLK1(1)                         --------->MYB52(1)         --------->MYB46(3)  --------- ---YAB1<---------At4g35610   ------->TEIL ----------->HVH21<---------------AGL15  <---------MYB52(1)   ttcagagatcagctcaaaaatgaagtttgatgaatcgaaaacgctcttaccggtgagaaaacctgtaaatggcaaccgcaaaaccgctggttacaagctt  6698200                                                                                                <----                                                                                              -------                                                                                             <-------                                                                                          <---------RAP2.3(1)                                                                                          ------>NtERF2                                                                                        --------->SPL7                                                                                       --------->MYB52(1)                                                  <---------ANAC55(1)                 ----------->HVH21                                                  <---------ANAC58                    ----------->TGA1                                                  --------->ANAC55(2)               <---------At4g35610                                                  <---------ANAC55(2)               ----------->RAV1(2)                                                  <---------ANAC58                  --------->ZAT2                                                  <---------ANAC46       --------->MYB52(2) <--------                                         <-----------GT1    ---------->DOF2---------->ID1<---------RAP2.3(3) -----DOF2                            --------->YAB1<---------CCA1(2)    <---------MYB46(3)<------NtERF2 >ANAC58                    <---------MYB52(1) <---------ARR14(2)      <---------MYB52(1)<---------DEAR3(1) >ANAC58                   <----------DOF2     --------->ARR14(2) --------->GLK1(2) --------->At4g35610   tgggttctaatcgctgttctactcttggcctttggttctatgttaaccggttccgtctctctcaaaggaatcggtttgttccattctgctgacggcgtta  6698300                                                       --------->ATHB51                                                       --------->ATHB12                                                      <---------YAB1                                                --------->AHL20(2)                                         <---------AHL20(2)                                        <---------AHL20(1)                                   --------->ANAC58 --------->YAB1                              <---------------AtSPL8<---------ICU4                       --------->YAB1                              <---------HSFB2a(2)  --------->AHL20(2)                 <----------DOF2                              --------->HSFB2a(2)  <---------AHL20(2)      --------------->AGL15                              <---------------AtSPL3-------->ATHB1         --------->HSFB2a(2)                    ------>ZmHOX2a(2)   --------->AHL20(1)                 <---------------AGL15       <----------DOF2     <---------ARR14(2)--------->YAB1               ----------------->AG -----DOF5.7(2)   --------->ARR11(3)    <---------AHL20(2)                ----------------->AGL2 -->DOF5.7(2)     <---------ARR11(3)    --------->AHL20(2)                <-----------------AGL1 ---DOF2     <---------DEAR3(1)    --------->ANAC58<---------ATHB51       <-----------------AGL2 -ANAC46    <---------------------WRI1------->TEIL --------->ICU4         ----------------->AGL1   acgcattctctttcggcgatgatctcgacgttctggtacgaatttattcataaattattattgatttttgttttcttccaaaattggtctttcaaaattt  6698400                                                                                     <----------DOF2                                                                                    <---------ANAC46                                                                                    <---------ANAC58                                                                                   <------NtERF2                                                                                 <---------DEAR3(1)                                                                                 --------->ALFIN1                                                                      <---------SPL7<---------ANAC58                                                                    --------->SPL7------>NtERF2                                                                <---------------AtSPL3                                                               <---------ANAC46 <---------MYB52(1)  -                                                          --------->ALFIN1     --------->LBD16      <                                                        --------->ALFIN1 --------->ANAC58        <---                      <------ZmHOX2a(1)               <---------At4g35610--------->ANAC58       -----                     --------->ANAC58                 --------->At4g35610<---------ATERF1(1)<--------                     --------->ANAC58       --------->ALFIN1   <------------------SPL14  <---------TOE2(3)                ----------->HVH21        --------->DAG2 ========================================bZIP_DOF                <---------YAB1          ==========================bZIP_DOF   <---------LBD16---------             --------->GLK1(2)          ---------->DOF2 <---------TGA1a --------->SPL7   <---------TOE1(3)   tgagaaattttaaaaattctgacaggaaattgaagagagagagaaagtggtgagacagatgtgggatgtgtacggacgctccggtggcgttaaggttcct  6698500  Previous    Next  AGI:  At1g19376.1    Description:  snoRNA. snoRNA Range:  from: 6697429    to: 6697515    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g19380.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G65650.1); similar to unknown [Vitis pseudoreticulata] (GB:ABC69762.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61173.1); contains InterPro domain Protein of unknown function DUF1195 (InterPro:IPR010608) Range:  from: 6698049    to: 6698815    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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