Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               --------                                                                                            <--------                                      <---------WRKY18(1)                                  <---------                                    <---------WOX13(1)       <----------DOF2              --------->ANAC46                                   <---------ANAC58         <---------ANAC58              --------->ANAC58                                   <---------ANAC58         <---------ANAC58              --------->ANAC55(1)                                   <---------AtLEC2     <---------ANAC58                  --------->ANAC55(2)        <----------DOF2            <---------ANAC46     <---------ANAC58                  --------->ANAC58 --->RAV1(1)          <---------------AtSPL8     <---------ARR11(3)                       <---------ANAC55(2) >MYB46(3)   <---------TOE2(3)  <--------P       --------->ARR11(3) --------->CCA1(2) <---------ARR14(2)   aaaattagagctttagaggtttatgtagtacctggttgcttgacttcgaaagatgttcgcttgctttgagagatgagcttgagttgaagaacccgtaagg  6692100                 --------->MYB52(1)              --------->ANAC55(2)              --------->ANAC55(1)                              <---------LBD16              <---------ANAC55(2)                          <---------ARR14(2)              --------->ANAC46                             --------->ARR14(2)              --------->ANAC58                             <---------ARR11(3)              --------->ANAC58                  --------->ANAC58            <---------ALFIN1                    --------->ANAC58         --------->ZAT14                    <---------ANAC58--------->CCA1(2)     <---------DEAR3(1)                     <---------ANAC58<------ZmHOX2a(2)                 ------>NtERF2    --------->SPL7 --------->MYB46(3)    <---------DEAR3(1)--------->AGP1                    --------   <---------ARR14(2)                  ===============HOX2a_HOX2a                            --------   --------->MYB52(1)                  <------ZmHOX2a(1)   --------->ARR11(3)                --------   --------->ARR14(2)                  ================HOX2a_HOX2a          <---------ANAC58--------- ----------------------->TaNAC69(2)  <---------TOE2(3)  <---------HSFB2a(2) <---------ANAC58<-------- ->SPL7  ------>NtERF2       --------->CCA1(2)  ------>ZmHOX2a(2)     <---------MYB46(3)--------->ANAC46 -MYB52(1)<---------ALFIN1  --------->ARR11(3) <------ZmHOX2a(2)--------->ANAC46   --------->ZAT6 --HVH21 <---------ZAT18---------->DOF2============================HOX2a_HOX2a  <---------CCA1(2)   gaacagaacggcgcacacgcaaccgataaagataccgatgaggatggcgatcgcaattcgagatccacggagttgttggcttctatctctacgacccgcc  6692200     --------->WRKY12     --------->WRKY38(1)     --------->WRKY45    --------->DOF5.7(2)    <---------MYB52(1)   <-------GAMYB                                  <---------GLK1(2)   <---------At4g35610                           ---------->DOF2   --------->At4g35610              --------->ANAC58  <---------MYB46(3)              --------->At4g35610            --------->DAG2 ->ANAC46             ---------->DOF2          --------->HSFB2a(2) ->ANAC58           ------>ZmHOX2a(1)          <---------HSFB2a(2)        <----------DOF2 ->ANAC58<----------DOF2        --------->YAB1 <-----------RAV1(2)  <------ZmHOX2a(1) >MYB46(3)         --------------->AGL15---------->DOF2         ---------->DOF2 -MYB55(2)         --------->TOE2(3)--------->ANAC58--------->At4g35610   <---------DAG2   atggccgttgacttttctcttccttatagcgaaatcagaagccaaagacccagaagctcaaaatgaaaaaggactcctttttgatcacctagttgaagaa  6692300                                                                              <----------DOF2                                                                            <------NtERF2                                                                           --------->LBD16                                                                           ------>NtERF2                                                                          <---------ATERF1(2)                                                                          --------->ATERF1(2)                                                                         --------->RAP2.6(3)                                                                        ------>MYB83                     <---------ZAT6                                     --------->MYB52(1)                 <------ZmHOX2a(2)                                     --------->MYB55(1)              <---------MYB46(3)                               <-----------HVH21           <---------ANAC46                              --------->ARR11(3)<---------RAP2.6(3)          --------->ALFIN1                             <---------TOE1(2)------>MYB46(1)<---------MYB46(3)        <-----------RAV1(1)                        <---------LBD16   ----------->RAV1(2)        -----   agttttggtaatgtggtggatcagagttaaaccctagaaatgttctgtttttcttcggaggtctcggtcatacctgccggcttttgaagttgttgagaga  6692400          <---------ANAC58          <---------ANAC46          <---------ANAC58                       ---------->DOF2                    <---------REM1(1)      <---------ANAC58                 <---------------------WRI1              --------->ANAC46      <---------ANAC58                ------>NtERF2                   ------>ZmHOX2a(1)  <---------GLK1(2)    --------->ARR11(3)               --------->DEAR3(1)  ---------->DOF2    --------->ZAT14 ----->DOF2                  --------->LBD16  ------->TEIL          *TSS  --------->ANAC46    <------   aagagagagcttgtgtgtttggcttcgtctccgaagacgacgacgatgaatcaaagctcgaaagtaatgttcctctacttcacacgatgtagattccttt  6692500                                                                      <---------WRKY12                                                                --------->MYB52(1)                                                               ----------->HVH21                                                             <---------At4g35610                                        <---------bZIP60(1)  ----------->RAV1(2)                                        --------->bZIP60(1)  --------->At4g35610                                     ----------->HVH21 ------>NtERF2 --------->WRKY18(1)                                   <---------At4g35610----------->HVH21                                   --------->At4g35610--------->WRKY38(1)      <----------DOF2             --------->MYB52(2)  --------->WRKY12<---------WRKY38(1)   --------->GLK1(2)            <---------MYB52(1)  <---------At4g35610                           <-- ----DOF2--------->MYB52(2)    <-----------HVH21    --------->At4g35610              <---------YAB1 <   ctgaaattctttagttgaagatgaagtcttaaccgttagatgacatgactatttcgctgactcatctgacggtcaacataacacattataaatcgagatt  6692600                                --------->STY1(2)                            ------>MYB46(1)                          --------->MYB46(3)                        <-----------GT1                       <-----------GT1                   --------->ATHB51                   -------->ATHB1<---------ANAC58                   <--------HAHB4<---------ANAC58                   <---------AHL20(2)                   --------->AHL20(2)         <---------AHL20(2) ------>MYB83                 <---------WOX13(1)           <---------TOE2(3)         --------->AHL20(2)<---------ALFIN1  <---------ANAC55(2)                   <---------WOX13(1) ----------->GT1  --------->ICU4<---------STY1(2)     <---------YAB1             --------->ATHB12 -------TOE2(3)   <---------ATHB51        <------ZmHOX2a(2)           --------->ARR11(3) ------ZmHOX2a(1) <---------ATHB12       <-----------HVH21    --------->AtMYB61 <---------YAB1   aaggagaaaaattaaactcaattatttacccacttgctagcacgatcacatgagacatgatagaccaaaacacatcttgactatgattgagattaagttg  6692700                       <---------WRKY18(1)                      --------->WRKY45                 <---------YAB1                                         ----------->GT1               <---------ICU4                                          --------->DAG2               -------->ATHB1                                         ---------->DOF2               --------->YAB1                                    --------->AHL20(2)           -------              <---------YAB1                                 <---------ANAC58                --------              <---------ATHB51                               <---------ANAC46        --------->SPL7              --------->ICU4                                 <---------ANAC58       ------>MYB46(1)     <-----------HVH21----------->HVH21                  <---------ANAC58           ------>MYB83   <-  --------->At4g35610 --------->WRKY12  <---------------------WRI1   <---------AHL20(2)   <------ZmHOX2a(1)  <---------At4g35610 --------->WRKY38(1)                <---------ANAC58           --------->MYB52(1)   ttttagctgtcaaacaattattctttgaccagagtttttgtattcgaaaatttcaagagacttgcgtttatataaagttaaaaaccgaacgaggaataat  6692800                                                                ----------------->AGL2                                                                ----------------->AGL1                                                                <-----------------AGL1                                                            <---------ANAC58                    ----------->GT1                         <---------ANAC58--------->ANAC46                  ---------->DOF2                          <---------TOE2(3)--------->ANAC58             --------->AHL20(2)                           <-----------GT1   --------->ANAC58         <---------ANAC46                               <---------WOX13(1)<---------AtLEC2    <----------DOF2--------->DAG2 <---------YAB1     --------->ICU4  --------->GLK1(2)          <---- -->YAB1 <---------ANAC58    <---------ICU4          <---------YAB1  <---------ARR14(2)  --------->GLK1(2) ->ICU4  <---------ANAC58   --------->ICU4         ----------->GT1   --------->ARR14(2) <---------GLK1(2) ----------GT1   <---------AHL20(2)               --------->ALFIN1  <---------GLK1(2) <---------ATHB12   aaaaccctttagcgtttatataaagttacaaagattacaatttttgaagtaagtggtgattaacgtgccagaatttgcaagtaatccaaagattctaact  6692900                                                                                      <---------ICU4                                                                                     <---------ATHB51                                                                                     <---------YAB1                                                                                     --------->ICU4                                                                                 --------->LBD16                                                                                --------->DEAR3(1)                                                                              --------->ABI4(1)                                                                             --------->AtMYB61                                                                             --------->DEAR3(1)                                                                             <---------ALFIN1                                 --------->ARR11(3)                         --------->MYB46(3)                                 <---------ARR11(3)                         <---------ABI4(2)                         ------>MYB83                                      ------>NtERF2                         ------>MYB46(1)         ------>MYB46(1)         --------->MYB46(3)         -                       <---------MYB59           ------>MYB83          --------->ANAC58           ---                       <---------MYB46(2)      <---------MYB46(2)      --------->ANAC46         ----- <---------MYB52(1) <-----------GT1------>ZmHOX2a(2)                   --------->ANAC58         <---- ------DOF2 <----------DOF2    <---------ATHB12<---------MYB59--------->YAB1<---------MYB55(2)<------   ttcgttatccaaaactttgttgttaccaaacaaatgatctcttctattaccaaacccgtttgaatcaagacccgagccaccaccgcgataattgttatga  6693000  Previous    Next  AGI:  At1g19360.1    Description:  similar to RRA2 (REDUCED RESIDUAL ARABINOSE 2) [Arabidopsis thaliana] (TAIR:AT1G75110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61198.1); contains InterPro domain Reticulon; (InterPro:IPR003388) Range:  from: 6690447    to: 6692468    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g19370.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G75140.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61180.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046) Range:  from: 6692755    to: 6694925    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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