Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 ------->GAMYB                                                                               --------->AtMYB61                                              --------->ANAC58                --------->MYB46(3)         --------->ANAC58                     --------->ANAC58                <---------MYB52(2)         --------->ANAC58                   ---------->DOF2                   <---------MYB55(2)         --------->ANAC46              ---------->DOF2              --------->MYB46(3)         ----------->GT1           <---------------AGL15           ------>MYB46(1)  --------->ANAC46                ----------------->AGL1           ------>MYB83<---------ALFIN1  --------->ANAC58                <-----------------AGL1          --------->ANAC58  --------->ANAC58                <-----------------AGL2          --------->ANAC58             <----- -------->MYB52(1)                ----------------->AGL3          --------->ANAC46      ----------->HVH21 --->AGL15                        <-----------------AGL3         --------->MYB46(3)     --------->DREB2C(2) ----AGL15                        ----------------->AGL2      <-----------GT1 <---------MYB111(2) -----AGL2           --------->YAB1--------------->AGL15    <---------DAG2   -------->P--------->DEAR3(2) ---->AGL3        ---------->DOF2 <-----------------AG      <----------DOF2  ------>MYB46(1)   <----- -----AGL3    <----------ID1      ----------------->AG   <-----------GT1     ------>MYB83----------->RAV1(1) ---->AGL2<------ZmHOX2a(1)     <-----------GT1     --------->AHL20(2)      >>>>>>>>>>MYB80  <-------   gaaaacggaacaggaaacaacaaagataacatttttaccaaaaaaggaaagaaatcaaataactttaccagccaatgccaaccaccgagaccgacagctt  6683100                                                                       <---------bZIP60(1)                                                                       --------->bZIP60(1)                                                                       <---------ANAC58                                                                       <---------TGA1a                                                                       --------->O2                                                                       --------->ANAC55(2)                                                                       --------->TGA1a                                                                       <---------O2                                                                       <---------bZIP60(2)                                                                       ==============================                                                             <---------DAG2                                                             ====================bZIP_DOF                                                 <---------At4g35610   <---------ANAC46                        --------->MYB46(3)     <---------LBD16         <---------ANAC58                        <---------ABI4(2) <---------MYB46(3) <----------DOF2                       --------->ANAC58  <--------P--------->WRKY38(1) <---------ANAC55(2)                       --------->ANAC58  ========================================MYC_MYB                     --------->MYB46(3) <-------GAMYB  --------->AtMYB61                     ---------->DOF2    =========================================MYC_MYB                    ------>MYB46(1)  <---------LBD16  --------->MYB46(3)      <---------ALFIN1 --------->ANAC46 <---------MYB52(1)<---------ALFIN1 <-----------GT1    -------->P       --------->SPL7----------->HVH21  ----------->STF1 -----DOF2          ------>MYB83  <---------ANAC58 --------->WRKY12 ----------->TGA1 ----DAG2         --------->AtMYB61<---------SPL7--------->LBD16  <---------AtLEC2 --At4g35610--------->REM1(2)     <---------ANAC58<---------MYB52(1)----------->HVH21   ttttgacaacaccttgaagaccaacaagcaccgatttcgtccggttgtttccggtgaccaccacttttgtatgacgtggcaataccgataactcttcttc  6683200                                    <---------HSFB2a(1)                                    --------->HSFB2a(1)                                   <---------ARR14(2)                                   --------->ARR14(2)                                  --------->GLK1(1)      --------->At4g35610               ---------->DOF2    <---------GLK1(1)   ------>ZmHOX2a(1)            --------->LBD16   <---------ANAC46        --------->LBD16            --------->At5g28300--------->LBD16      ----------->RAV1(2)             <<<<<<<<<TBF1        ------->GAMYB        <---------LBD16    <---------ALFIN1        --------->HSFB2a(2)       --------->MYB46(3)--------->ARR14(2)     --------->AtMYB61  --------->At4g35610   --------->ZAT14       ------->TEIL  ------>ZmHOX2a(1) <---------At4g35610     <<<<<<<<<TBF1 ===============MYC_MYB  <---------ARR14(2)  <-----------GT1       <---------At4g35610 <<<<<<<<<TBF1   actactgcaatcgccgtaaaagctctgaatctgcgggaatcctccattcaccactcctgagctatctacagcttccagcattcttcttcttcttctctaa  6683300                                                           --------->ZAT6                <---------ANAC46                             ------->GAMYB           <----------DOF2              --------->AtLEC2                            --------->MYB46(3)     <---------At4g35610         <------ZmHOX2a(2)                           --------->At4g35610     --------->At4g35610        --------->ARR11(3)                          --------->MYB52(1)   <-----------GT1                <---------ARR11(3)    -   tctaatctgattttagacctgaagaaatcaacagacccagttcgatttttttcagctttgaacactgatagaaaatcgaagatcatgcattgctgagaga  6683400                    >>>>>>>>>>E2Fa                    >>>>>>>>>>E2Fd                    >>>>>>>>>>E2Fc               <---------ICU4             <---------WOX13(1)                 --------->AHL20(2)           --------->ATHB12                     <---------AHL20(2)          <---------YAB1                        <---------ATHB51        --------->At4g35610                     --------->ICU4        <---------At4g35610        --------->GLK1(1)            <---------------AGL15      <-----------RAV1(2)         <---------ARR11(3)  <---------TOE1(3)     <------ZmHOX2a(2)     --------->ALFIN1    <---------AHL20(1)    --------->ARR11(3)  --------->DAG2        --------->YAB1 --------->PCF2    <---------ARR11(3) ---------->DOF2   ----------->GT1     ---------->ID1--------->At4g35610------- --------->DOF2     >>>>>>>>>>E2Fe--------->ARR11(3)  <---------TOE2(3)   ------------------------>ANAC81   gggaaagatcagatgattgagcgggaaaagtggagagatatcgaagtaaaataattagggtttgtcccacaagaagaagcagagagagaagaagagagat  6683500                                                                             ------>NtERF2                                                                             <---------PCF5                                                                          ------->PIF5           <---                                                                          <-------PIF5          -----                                                                          --------->LBD16       -----                 <---------ZAT14                <------ZmHOX2a(1)       <---------LBD16    --------->ANAC58          --------->At4g35610      <------ZmHOX2a(1)                   <---------ALFIN1    --------->ANAC58     ------------------------>ANAC81    ---------->DOF2             <-----------GT1 --------->YAB1     >>>>>>>>>TBF1  *TSS         --------->ALFIN1          <-----------RAV1(2) ------------>CBF ----- -->CCA1(2)      ---------->DOF2<------ZmHOX2a(1) <---------YAB1  <-----------GT1--------->WOX13(1)   gagagaagaagaagcagagtaaagagaaggtagaggaggagggaaagagaggatgatagagacaggtttttcaccacggggaccaattagaagaagccat  6683600                                                                                                    -                                                                                              -------      --------->ZAT14                                                                         -------      <---------ZAT14                                                                         -------    <---------------AtSPL3                                                                    -------   <------------CBF                                                        <---------DAG2    -------- --------HVH21                        --------->ARR14(2)                   <----------DOF2 --------->ZAT14 ---->bZIP60(2)                       <---------ARR14(2)         --------->LBD16     <-----------GT1- ---->O2                   --------->AtLEC2                    <---------LBD16    <---------ICU4   <- ---->TGA1a             <---------MYB52(1) <---------MYB52(1)<-----------GT1   ----------->GT1<------   gtcagcattgtactgaaactatatgcgttatgcaaaaacagaaccggtttttttgtttggatttaaccggaggggtacttttggtaattacagaacacgc  6683700                                                                                     --------->ANAC55(2)                                                                                     ----------->GT1                                                                                     --------->ANAC58                                                                                     --------->bZIP60(1)                                                                                     <---------O2                                                                                     <---------bZIP60(1)                                                                                     --------->bZIP60(2)                                                                                     --------->O2                                                                                     --------->ANAC55(1)                                                                                     ================                                                                         <-----------GT1                                                                        --------->KAN4(2)                                                                        ----------------------->TaNAC69(2)                                                                     ==========================MYC_MYB                                                                     <-------GAMYB   --------->ANAC46                                                                     --------->At5g28300                                                                    <---------MYB46(3)              <---------WRKY18(1)                                   ----------->GT1  ================   ----------------->AGL1                                          <---------ANAC46  --------->ANAC58 <---------WRKY18(1)                                             ------------>MYB.PH3(1)   <---------DAG2 ---------->HVH21                                                ==============================MYC_MYB -->ANAC58   --------->WRKY12                               --------->AHL20(2)       --------->TGA1a -->ANAC58  <---------WOX13(1)                          <---------AHL20(2)   --------->TOE2(3) <----- -->ANAC46--------->ATHB12  <---------ICU4          <---------MYB52(1) <----------TaMYB80  <--------- -->ANAC55(2)----------->HVH21                 --------->PCF2    --------->MYB52(1)  <---------ANAC55(2) ->TOE1(2)<---------MYB46(3)---------->DOF2   <---------PCF2<---------AHL20(2)<---------MYB52(1) -------->WRKY12        <---------AHL20(2)    --------->TCP20    ==============================MYC_MYB --------WOX13(1)   <---------ANAC46          --------->TCP15(1) ------------>AtMYB77<---------TGA1a ---ANAC55(2)--------->WRKY38(1)             ----------->HVH21  ----------->HVH21<-----------HVH21   gattgacctgaatggttgactggtgtttaataaagacagagatagatgggacccgtttttatttaaatgacggttatacccttagtcacgtaactttttt  6683800                                                            --------->ATHB12                                                            -------->HAHB4                                                            <---------ICU4                                <---------CCA1(2)           --------->ATHB51                            ---------->ID1                  -------->ATHB1                  ---------                        --------------------->WRI1         <---------YAB1                   ---------                        <----------DOF2                    <---------ATHB51                <---------YAB1                    ------>ZmHOX2a(2)                    <---------ICU4                  <---------ICU4                    ==================HOX2a_HOX2a        <--------HAHB4                  --------->YAB1                  <---------ARR14(2)                    <---------YAB1                  <---------YAB1                  --------->ARR11(3)                    --------->ICU4               <---------YAB1 =bZIP_DOF        <---------ARR11(3)           <----------DOF2                       <---------AHL20(2) =bZIP_DOF        --------->ARR14(2)        <-----------GT1--------->ICU4        <---------GLK1(2) ------GT1       <---------CCA1(2)     <---------YAB1 --------->YAB1             --------->ARR11(3) -DOF2     <---------AHL20(2)  ------>ZmHOX2a(1)   <----------DOF2               <---------ARR11(3)   ccatagtttgaatttttttggatcttctttgtccttatcttataattttctttctttcataattattgctctctccattactagatttttattattattg  6683900                                                --------->ANAC46                                                --------->ANAC58                 --------->YAB1                 --------->ANAC58                            ---------                <---------YAB1       ----------->GT1                         <---------AHL20(2)            <----------DOF2   <---------------AGL15   <---------------AtSPL8--------->AHL20(2) >ATHB12    <---------DAG2    --------------->AGL15   <---------------AtSPL3<---------AHL20(2)     -- >ATHB51 <-----------GT1  <---------GLK1(2)   --------->MYB52(1)     ----------->GT1<------ZmHOX2a(2)   agaacaatgttttactttatgaaaaccaggttctcaaaacagcaaaataaacgaaacaagtactgcttagtaagtgaaataaatggatcaaatacagtaa  6684000  Previous    Next  AGI:  At1g19330.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G75060.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61216.1) Range:  from: 6680554    to: 6683520    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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