Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 <------ZmHOX2a(2)                                                                     <--------HAHB4                                                                     --------->ATHB12                                                                     --------->YAB1                                                                     <---------ICU4                                                                    <---------YAB1            -------                                                                    <---------ATHB12          <------     <---------WRKY18(1)                                 <---------YAB1<---------YAB1         -------    --------->WRKY12                                   <-----------GT1--------->TOE2(3)    --------->YAB1    --------->WRKY38(1)                     <---------ANAC46        --------->ICU4      <----------DOF2   <---------WOX13(1)                       <---------AtLEC2      --------->YAB1      --------->At4g35610 ---------YAB1                              <---------ANAC58      <---------ICU4      <---------At4g35610 -->MYB46(3)                                <---------ANAC58     <---------ATHB12--------->WOX13(1)<-   ctctcattgaccaaaatgaaattagtgattccaaattttctaatttgcttgaatttgtcacgattcaataatcattaatggatcattcagctttaataat  6677300                                                                               ---------->DOF2                                                                      ------>ZmHOX2a(2)                                                                     <<<<<<<<<GATA-3                                                                     <------ZmHOX2a(2)                                                                     <<<<<<<<<GATA-1                                                       --------->YAB1<<<<<<<<<GATA-4                                                 --------->ANAC58    <<<<<<<<<GATA-2    --------->AHL20(2)                           --------->ANAC58    <---------GLK1(1)   --------->AHL20(2)                            --------->ANAC46   <---------AGP1--------->MYB46(3) --------->TOE2(3)                             --------->MYB52(1)   <---------ARR11(3) -->AHL20(2)                               <<<<<<<<<ARR2            --------->ARR11(3) ---AHL20(2)                 ----------->GT1--------->YAB1         <---------CCA1(2)               -- -->YAB1  ------------------------>ANAC81  <---------ATHB12      <---------HSFB2a(2)              <-- ------TEIL         ---------->DOF2      --------->WOX13(1)      --------->HSFB2a(2)        <--------   atacattaaaaaatccaaaaaaaaaagagagaagtaattcaaacaatcaaaacggaatcataaacctctagatctctccgataaaccactaaaatcaccg  6677400                       <------------MYB.PH3(2)                       <---------MYB59                     <-----------GT1                         --------->ANAC58          --------->LBD16                                  --------->MYB52(1)             ---------->DOF2         <---------ANAC46              --------->YAB1     --------->ARR14(2)          --------->ANAC58         --------->LBD16 --------->MYB52(1)      --------->YAB1                       --------->AtLEC2 ------->YAB1   --------->AHL20(2)    <---------ATHB12    <---------ARR14(2)          --------->ANAC58 ----ZmHOX2a(2) <---------AHL20(2)    --------------->AtSPL3 --------->ANAC58  --------->AHL20(2) ---GT1 <---------LBD16<---------MYB52(2)      <---------ARR11(3)   <----------ID1   --------->WOX13(1)   atcatatattcccgtgaataaaataactaacttatctccaatcgtacaaaatcataaacagaaacggaaaacgagaaacaaaaaaatcaagcaaaagagt  6677500                                                                              ---------->DOF2                                                                    --------->ANAC58                                                                    ------>ZmHOX2a(2)                                                                    --------->ANAC58                                                                   <------ZmHOX2a(2)                                                                <---------HSFB2a(1)                                                                <---------HSFC1(2)                <---------AHL20(2)                              --------->HSFB2a(1)              <---------AHL20(2)                                --------->MYB46(3)              --------->AHL20(2)                           --------->ANAC46 --------->LBD16        --------->LBD16                                    --------->ANAC58--------->ANAC58  --------->MYB46(3)                                  --------->ARR14(2)<---------ARR14(2)  --------->KAN4(1)                                   <---------ARR14(2)--------->ARR14(2)<---------MYB52(1)  <---------KAN4(1)                   <---------ARR14(2)   --------->ANAC58--------->ANAC46  <---------HSFB2a(1)  --------------->AGL15<---------DEAR3(1) <---------KAN4(2)     <---------ALFIN1  --------->HSFB2a(1)<---------At5g28300------>ZmHOX2a(2) <---------LBD16  --------->ANAC58    <----- <---------KAN4(2)  <-----------GT1   --------->ARR14(2)------>ZmHOX2a(2) <---------LBD16<---------SPL7   tggaacaatccgaaatataaatttaccgattagagatttagatcgggcgatgaagggatcgacggaacgatcgcaatccgcaaaggaacaccgttcgctt  6677600                                                           <---------TOE2(3)                                                          --------->AHL20(2)                                                          <---------AHL20(2)                                                          --------->YAB1                                                        <---------AHL20(2)                   <----------ID1                       <---------YAB1               <------NtERF2                            --------->AHL20(2)                        ---              <------NtERF2                         <---------GLK1(2)                            ----              --------->LBD16              <---------CCA1(1)                                    <----            <---------LBD16                <---------RVE1(1)                                    -----          <------MYB83                    --------->AHL20(1)                                 <-------        <--------P<------ZmHOX2a(1)       <---------AHL20(1)                             --------->AHL20(2)     <---------TOE1(3)                    --------->ARR11(3)                             <---------AHL20(2)     <---------TOE2(3)                ---------->DOF2  --------->YAB1               <---------AHL20(2) -----DOF2<------MYB46(1)   <-------TEIL  <---------ARR11(3)    *TSS   <-----------GT1  --------->AHL20(2)   aagggttaaggttggccggaggagacaagtttcatcgagagaaagatattttcagaatattaatatttgtattaaacctgttttgttttatttaattacc  6677700                                                          --------->MYB52(1)                                                         ----------->TGA1                                                         ----------->HVH21                                                        ------->MYC2                                                        <-------MYC3                                                        <-------PIF5                                                        ------->PIF5                                                        <-------PIF4                                                        <-------MYC4                                                        <-----------HVH21                                                        <-------MYC2                                      ------->MYC2      ------->PIF4                                      ------->MYC3      ------->MYC3       =================bZIP_DOF      <-------MYC3      ------->MYC4       <---------TGA1a                ------->PIF5     --------->TGA1a       <---------bZIP60(2)            <-------MYC2     --------->ANAC58       --------->O2                   <-------PIF5     --------->ANAC55(2)       <---------O2                   <-------MYC4     --------->O2       --------->TGA1a               --------->O2      <---------TGA1a       <---------ANAC58              --------->TGA1a   <---------O2       <---------ANAC46              <---------O2      --------->ANAC58       <---------ANAC58              <---------TGA1a--------->ZAT18       <---------ANAC55(1)           --------->ANAC46<------------OsbHLH66       --------->ANAC55(2)           <---------PIF3(3) --------->ANAC46    ----------->HVH21                --------->PIF3(3)------->TEIL  <------------CBF           <---------ALFIN1       <---------ZAT14 ------>LBD16               --------->LBD16     ------->MYC3 ----->ANAC46           ---------->ARF1--------->ALFIN1--------->bZIP60(2)                  <-------- -----LBD16             --------->PCF5------->MYC4  <---------ZAT18                         --------- ---->TOE1(2)<----------DOF2------------>CBF    <-------MYC3<---------ANAC46        >>>>>>>>>>WRKY63 ----GT1     ==================================bZIP_DOF<---------ANAC55(2) <---------MYB46(3)   cgcgaattgacgtgtcttttggactggtcccccaattccacgtgggaacatgtgtgcacgtgacggagaactagtggctgtttcaagtcaacaatatcgt  6677800                                                                                                    <                                                                                                    <                                                                                     <---------SPL7 <                                                                                     --------->TOE1(2)              <---------WOX13(1)                                                     --------->TOE2(2)              <--------P                                                           <---------------AtSPL3            <---------MYB46(3)           --------->MYB52(1)              --------->YAB1             <            <------MYB83                ------->GAMYB                   <---------AHL20(2)          <            <------MYB46(1)            <---------MYB52(2)        ------->TEIL      --------------->AtSPL8     <---------MYB52(1)    --------->ARR11(3)                 <---------YAB1       --------------->AtSPL3 -ARR11(3) <---------AtMYB61        --------->MYB46(3) ------->TEIL --------->AHL20(2)      <-------- >ARR11(3)<---------WOX13(1)   ----------->GT1    --------->MYB52(1)<---------AHL20(2) --------->SPL7   cttaaccgttggattggttgataacgagagataatgtaacaactaacaaatctaatggatgttgatgaatataaataatagtatcaacgtacgactttaa  6677900                                                                               <---------ANAC58                                                                               <---------ANAC58           ----------->HVH21                                   ----------->HVH21   --------->WRKY18(1)                                       <-----------------AGL1<---------ANAC58  <--------ZAP1                                          <-------TEIL       <---------ARR14(2)  --------->At5g28300                                  --------->ARR14(2)   --------->ARR14(2) <---------MYB46(3)                                    <---------GLK1(2)    <---------GLK1(2) ---------ANAC58                                       <---------ARR14(2) ----------->GT1 ---------DREB2C(2)                              --------->ANAC58       --------->SPL1(2) ---------ANAC58                                 --------->ANAC58       --------->SPL7 ---------RAP2.6(2)                              --------->ANAC46     <---------SPL7           <----- ---------ANAC46       ----------->GT1           ------>NtERF2--------->DEAR3(2)   <---------ANAC58 --DOF2  ----------->GT1                        --------->ATERF1(2) <---------------AtSPL3   <-------   tggcggtcaaaatgtgacattgagacggtttcattaagtcagtttcagtgccagccagattcgacccgactcggtacggatacttgctcgacgatttatc  6678000                                                                                 ---------->DOF2                                                                        -------->ATHB1                                                                        <---------AHL20(2)                                                                        -------->HAHB4                                                                        --------->ATHB12                                                                        --------->ATHB51                                                                        <---------ICU4                                            --------->MYB52(2)         <---------ATHB51                                ------>ZmHOX2a(1)   <---------TOE2(3)  <---------YAB1                     --------->DOF5.7(2)   <---------TOE1(2)           --------->ICU4    <------ZmHOX2a(1) ----YAB1           --------->TOE2(3)     <---------MYB52(1)     ------->TEIL<----------ID1  <------- ----GT1          <---------TOE1(2)<---------YAB1 <---------AHL20(2)--------->AHL20(2)  ----------->GT1   attcgtttatcgactaatccaacgtttactactccttattcttcgtttgtttttaatgttcttcatgaacttaattattgagacaaagtgaggaaaatat  6678100                                      <------MYB46(1)                                      ----------->GT1                                      <---------DEAR3(2)                                      <------MYB83                                     <---------DEAR4(1)                                     <---------MYB46(3)                                     --------->MYB46(2)                                     <---------DREB2C(2)                                     --------->MYB55(2)                                     <---------DEAR3(1)                       <----------DOF2                                    <---------ORA47(1)                        <---------DAG2        <----------DOF2           <------MYB83--------->ARR11(3)              =======================    <---------ZAT18               <------MYB46(1)                          <-----------GT1    --------->ZAT18              --------->MYB59                        --------->TOE2(3)    <---------ZAT14         <---------YAB1    <---------ARR11(3)<---------ARR11(3) --ARR14(2)         ------->TEIL <---------AtMYB61              --------->ARR11(3)        -----------   ggagagtgtgcttttgttcatgaacatgttctgatttggtcggtgataaatcttctgtatcaagaagatgtttacattaacttttcaaatgacaacatat  6678200  Previous    Next  AGI:  At1g19310.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT2G23780.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN79067.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 6676225    to: 6677664    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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