Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               <------NtERF2                                                                             <---------LBD16                                                                             <---------At4g35610                                                                             --------->At4g35610                                                                            <---------ERF1  <------NtERF2                                                                            <---------DEAR3(2)                                                                            <---------RAP2.3(1)                                                                            <---------ORA47(2)                                                               --------->ANAC58    --------->At4g35610                                                           --------->ANAC58 ------>NtERF2  ------>NtERF2                                                           --------->ANAC58 <---------ATERF1(1)                                                         <---------ANAC58  <---------At1g77200                                                         <---------ANAC58  <---------DEAR4(1)                                                         <---------ANAC46  <---------RAP2.3(3)                                                        <------NtERF2      <---------DEAR3(1)                                                 --------->CCA1(2)         <---------DREB2C(2)                                                --------->ARR11(3)        --------->ATERF1(1)                                 --------->MYB52(1)<---------AtMYB61   --------->HSFC1(2) -----------                    --------->At5g28300         <---------ARR14(2)     <---------HSFB2a(1)<---------DEAR3(1)                   ----------->GT1              --------->ARR14(2)     <---------HSFC1(2) <----------ID1                  <---------DEAR3(1)  ---------->DOF2  <---------MYB46(3)<-----------HVH21--------->DEAR3(1) -----ZmHOX2a(1) <---------------------WRI1 <------ZmHOX2a(1)  --------->ANAC58 <------NtERF2 >CCA1(2)   <---------ANAC46 <---------TOE2(3) <------ZmHOX2a(1) <------ZmHOX2a(1) <---------At4g35610   aggagacgttgaagacgtagacggtgaaatcaaggtaagggaaagaggaggatatggtggctcgtaaggaagaagcgtcggcggaagcagaggcgacgaa  6672200                                                                              ------>NtERF2                                                                              <-----------HVH21 -----                                                                             <---------DEAR3(1) <----                                                                             --------->DEAR3(1) <----                                                                             <---------ANAC46   -----                                                                            --------->RAP2.3(1) -----                                                                            <------NtERF2       -----                                                                            --------->ATERF1(1) <----                                                                            --------->RRTF1(1)  <----                                                                           <---------ATERF1(1) ------                                                                --------->ANAC58               <-----                                                      ------>NtERF2        ------>NtERF2       <-----                                                     --------->DEAR3(1)    <---------ERF1 --------->ANAC46                                                    --------->ATERF1(1)    <---------DEAR4(2)  <-----                                                    <------NtERF2  ------->TEIL<------NtERF2   ======                                                    --------->RAP2.3(1)    <---------ORA47(2)  <-----                                                   <---------ATERF1(1)     <---------RAP2.3(1) ------                                                   <---------RAP2.3(1)    <---------DEAR3(1)   <<<<<<                                     <---------------------WRI1 --------->ANAC58     <-----------HVH21                                    <------ZmHOX2a(1)----------->HVH21    <---------RAP2.6(2)  ------                            --------->ALFIN1      <---------DEAR3(1)      <---------RAP2.3(2) ------>NtERF2                            <-----------RAV1(1)  --------->At4g35610      <---------RAP2.3(3)<------- >HVH21          <------ZmHOX2a(1) <---------SPL7<---------At4g35610     --------->ATERF1(1)---------   gtggaaaacaatgttttcaggacaagaagagtgttggaggacggagagaacagcggcgactgagccacgaatgtaggcggcgtcgagtgtcatcgccacg  6672300   --------->ZAT2   <---------At4g35610   <---------ZAT2   --------->At4g35610 -->PIF5                              <-----------TGA1 ---PIF5                              <-----------HVH21 ---MYC3                             <---------ANAC55(2) -->MYC2                             <---------O2 -->MYC4                             --------->O2 -->MYC3                             --------->ANAC55(2) ---MYC2                             --------->ANAC46 ---MYC4 <---------ANAC46            --------->ANAC58 --->O2  --------->O2                --------->ANAC58 ----O2  <---------TGA1a             --------->ANAC55(1) ----PIF3(3)                         <---------bZIP60(1) ----TGA1a                           --------->TGA1a ==================bZIP_bZIP    ------>NtERF2 ----ANAC46             <------MYB46(1)--------->TGA2(2) --->TGA1a    <---------At4g35610    --------->bZIP60(2)                             ----------->GT1 <<<<HY5 <---------O2   <------MYB83 --------->bZIP60(1)                      --------->At4g35610 --->PIF3(3)  --------->At4g35610  <---------ALFIN1                       --------->ARR14(2)      <-- --ALFIN1--------->TGA1a----------------------->TaNAC69(2)                <---------ARR14(2)   ------ ------->PIF3(2)    --------->ATHB12<-----------STF1                     --------->WOX13(1)  <-------   tggacagctcgacgtgagcagaagattggtttggcgaccacgtcatcgtcggactcggagtcatcgattaaggggcaatctgcagaattgtaaaactgtg  6672400                                <------NtERF2                               --------->LBD16                              <---------ANAC46                             <---------LBD16                           --------->ALFIN1                   --------->YAB1    <----------DOF2--------->ATHB51 <----------DOF2   <--------ATHB1--------->ARR14(2)                   --------->YAB1 -------PCF2       <---------ICU4<---------ARR14(2)       <---------ANAC58        --------->ARR11(3) --->ALFIN1       <---------ATHB51                        <---------ANAC58  >>>>>>>>>TBF1 ----RAV1(1)      <---------AHL20(2)             >>>>>>>>>TBF1  <------ZmHOX2a(1) <---------ARR11(3)<   gggcttctttgaatttttgaataattgtagtggcggaaatgggtttatgaagaagaagtagcgagaggagaatgagaagaagaagatgttgggacatggt  6672500                                                                                                  ---                                  <------MYB46(1)                                      <---------DAG2                                  <------MYB83                                         <----------DOF2     <<<<<<<<<TBF1                <---------HSFB2a(1)                   <---------At4g35610   ------- ----------DOF2                   --------->HSFB2a(1)                   --------->At4g35610<---------   ttctttcttcttcgtcgactctctggttgtattggaaggttttgtttctctcaaactgagaacaagaagagaagagctgtctctaaacactttttatcat  6672600                                                                               <---------YAB1                                                                           --------->ARR11(3)                                                                           --------->AHL20(1)                                                                           <---------AHL20(1)                                                                        <-----------TBP                                                                        --------->AHL20(2)                                                                        <---------AHL20(2)                                           --------->ARR11(3)         <-----------TBP                          --------->AHL20(2)                       --------->ARR11(3)                          <---------AHL20(2)*TSS   <---------GLK1(1)--------->AHL20(2)                      <---------AHL20(2)   <---------GLK1(2)       --------->AHL20(1)       ---------                      --------->AHL20(2) ----------->ARR10         <---------AHL20(1)       --------- ------>ALFIN1  <------ZmHOX2a(1)     <---------ANAC58             <---------ARR11(3)       --------- -->YAB1       ----------->GT1        <---------ANAC46        --------->AHL20(2)--------->ATHB12 --GT1        ----------->GT1         <---------ANAC58       --------->AHL20(2)--------->ICU4    <---   gtgtgtgtgtaagagagaggaaaattaaaaaaatggttttgcttagattttgggtttctctcattaaaaaatatttatatattgattagattccaagccc  6672700                                                    --------->ANAC55(2)                                                    --------->At4g35610                                                    ----------->GT1                                                    <---------ANAC55(2)                                                  <-----------RAV1(2)                                                 <---------MYB52(1)                                                <-----------TGA1                                                <-----------HVH21                                               <---------ANAC46     <---------ARR11(3)                        <---------ANAC58               <-----------GT1   <---------YAB1  --------->ARR11(3)      <------------CBF               <---------AHL20(2)   --------->ICU4 <---------CCA1(2)       --------->ATHB51                --------->AHL20(2) --------->YAB1 --------->AHL20(2)        --------->ATHB12               <---------AHL20(2) >ANAC46   <---------AHL20(2)            <---------YAB1                  --------->AHL20(2) >ANAC58  <---------AHL20(2)             <---------AHL20(2)  --------->AHL20(2) >ANAC58  --------->AHL20(2)  ----------->GT1  <---------ANAC58   ----------->GT1       <-----------GT1 -------DOF2    <---------AHL20(2)   --------->YAB1 <---------At4g35610  <---------AHL20(1)   ttttcatgatttttaaatttaaatcttgaaaactgaaaatcatattattgcgtcaggtaacaaaaaaatggtcaaattatttactgaatttttcgactta  6672800                                                                          --------->ANAC46                                                                          --------->bZIP60(2)                                                                          --------->ANAC58                                                                          --------->ANAC58                                                                      --------->CCA1(2)                                                                      <------ZmHOX2a(2)                                                --------->ATHB12     --------->AGP1                                                <---------ICU4       <---------ARR14(2)                                               <---------YAB1        --------->ARR11(3)                                        <---------ARR14(2)           <---------ARR11(3)                                        <-----------GT1              --------->ARR14(2)                                 <---------AHL20(2)                ----------->ARR10                                 <---------AHL20(1)              --------->ZAT14                   <-                                 --------->AHL20(1)              <---------ZAT14                  ---                                 --------->AHL20(2)      ---------->DOF2<---------ALFIN1      -------                          --------->ALFIN1     --------->ICU4    --------->REM1(2)         ----------                     <---------ARR14(2) --------->ARR14(2) --------->GLK1(2)            <---------AHL20(2)   aatgtgttgttttatcgaatgcagaaatgtgggaatttattgtatccacatgattaccgaaaatcagtgtagatccacgttataggctatataatgtata  6672900                                                   <---------MYB52(1)                                                 <---------ANAC58                     <---------YAB1           <-----------GT1               --------->AHL20(2)          <---------ICU4    ----------->GT1<---------AHL20(2)     <---------YAB1                               ---------->DOF2 --------AHL20(2) <---------AHL20(2)      <---------AHL20(2)                --------->ZAT18 ------>AHL20(2)  --------->AHL20(2)    --------->YAB1        <-----------GT1        --------->AHL20(2) >TEIL       --------->TOE2(3)         <---------YAB1      <---------AHL20(2)        <---------AHL20(2) ->GT1 <---------MYB46(3)     --------->CCA1(2)  <---------ANAC58         ------------------------>ANAC81   ttaaatgggtgattacattatttattaatgagatttgagtttttataatttccgtttgtatttttttcttactaaaaatgcacaaaattaaaagagacat  6673000                              --------->YAB1                             <---------YAB1                  <---------YAB1                    --------------->AtSPL8      --------->ANAC55(2)                    <---------ICU4              <---------ANAC55(2)                    <---------------AtSPL8      --------->ANAC46                 --------->YAB1                 --------->ANAC55(1)               <---------WOX13(1)               --------->ANAC58        --------->CCA1(2) --------->ICU4        --------->ANAC58              ----------->GT1   ggaagttgatatatgagattgataagtacttatcaaaaacaaattcacacacgtaatatcgctatgtttgtctgtgcatacagtacaaacaaatagtttt  6673100  Previous    Next  AGI:  At1g19300.1    Description:  GATL1/GLZ1/PARVUS (GALACTURONOSYLTRANSFERASE-LIKE 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups. similar to GATL2 (Galacturonosyltransferase-like 2), polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] (TAIR:AT3G50760.1); similar to unknown [Populus trichocarpa] (GB:ABK94510.1); contains InterPro domain Glycosyl transferase, family 8; (InterPro:IPR002495) Range:  from: 6671128    to: 6672644    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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