Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   ------>MYB46(1)                                          ----------->GT1                        -------->P                                       <---------ICU4                            ------>MYB83                                       --------->ATHB12                    <------MYB83                                       --------->ATHB51                    <------MYB46(1)                    ------>ZmHOX2a(1)  -------->ATHB1                    <--------P   xxxxxxxxxxxxxxx           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                       <-----------RAV1(1) --------->TOE2(3)       ---------->ID1         <----------DOF2                         ------->MYC3   ------>MYB46(1) --------->HVH21<---------ARR14(2)    <---------YAB1                  <-------MYC3   ------>MYB83 ---WOX13(1)    --------->ARR14(2)   <----------DOF2               <xxxxxxxxxxxxxxxxsmallRNA(i)   actgaccttgtctcatcaaatcctcacattttctttttgcattattgtgaaaactattcacatccaatcccacatgttggtccaacctatcagccttatt  6659200                                                                                  ---------->DOF2                                                                             --------->ANAC58                                                                      --------->ZAT6     xxxxxxxxxxxx                                                                    <-----------GT1--------->DAG2                                                                 --------->ANAC55(2)   <----------DOF2                                                        ------>ZmHOX2a(2)    --------->ANAC58                                                       <---------GLK1(1)     --------->AtLEC2      <-                                                      --------->ARR11(3)     --------->ANAC46<-------                             --------->ZAT6<---------GLK1(1)     <---------ANAC55(2)   <---------DAG2 xx>smallRNA(se3)    ---------->DOF2       --------->GLK1(1)     ----------->GT1  <xxxxxxxxxxxxxxxxxx   ccaactacaaaaaccagttgatagaaagctatcactccctccttgatttccagtttgatctctgaataagtaacaatacaagcaaaaagctttttctttc  6659300                   --------->YAB1                  <---------ATHB12              <---------ATHB12              --------->MYB46(3)              <---------MYB55(2)             -------->P             ------>MYB46(1)                                   <----------DOF2             ------>MYB83                                     <---------DAG2             --------->ANAC46                               <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        --------->ANAC46                                   <---------ALFIN1     <---------ZAT14                                    ----------->HVH21     --------->ZAT14    --------->AtLEC2               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) --------->ANAC46------>MYB83 <---------ATHB12        <---------ANAC58 xxxx>smallRNA(i)------>MYB46(1)                      <---------ANAC58 --------ALFIN1 --------->WOX13(1)               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) ---DOF2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxsmallRNA(se3)--------->MYB46(3)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                 xxxxx   tccacactatactccaaccaatcaccatacaaatcaaaccattttggattaaaacggcgtaacacctttccaattgctatttgtttaaacttatgaccac  6659400                                   --------->SPL7                                 <---------SPL7                                --------->TOE2(1)                                --------->TOE1(1)                                    --------->LBD16                               --------------->AtSPL8                               <---------ANAC46                             --------->O2                                           <---------LBD16                             <---------TGA1a                                        <---------ANAC58                             ===========================bZIP_DOF                    <---------ANAC58                             <---------O2                --------->YAB1            <---------LBD16                             --------->TGA1a            <---------YAB1          <----------DOF2                             --------->ANAC46         <------ZmHOX2a(1)       --------------->AGL15                   --------->AHL20(2)    <---------CCA1(2)                  ---------->ID1  <--------                  <---------ATHB12 ------->TEIL --------->ATHB12        <----------DOF2  <------ZmHOX2a(2) xxxxxxxxxxx>smallRNA(i)   <-----------GT1   <----------DOF2            <---------DAG2 <---------PCF5   gaggttgacaaggtcccctaatcaaatattcacgtcgtacctcatctctttgattaggatgataacttagaatgctttttctctttgcgggatcacttgg  6659500                                   <-----------GT1                                <---------GLK1(2)                                <---------ARR11(3)                                --------->ARR14(2)                                <---------ARR14(2)                           <---------ANAC58                           <---------ANAC58                           <---------ANAC46                          <---------LBD16                          --------->ATERF1(1)                          <------NtERF2                       --------->ATERF1(1)                      <---------MYB46(3)                     <---------DEAR3(1)                     <---------AtMYB61                                  <---------ANAC58                     --------->ALFIN1                                   <---------ANAC58                 <-----------RAV1(2)  <----------DOF2             <---------MYB46(3)           --------->AHL20(2)   --------->ARR11(3)                <-----------RAV1(1)           <---------AHL20(2) ----------->ARR10                <-----------RAV1(1)          <---------AHL20(2) <------NtERF2                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)          --------->AHL20(2)--------->LBD16                <---------YAB1   <---------ANAC58     ----      <---------AHL20(2)<---------DEAR3(1)                <---------AHL20(1)<---------ANAC58    ----- -O2  --------->AHL20(2)--------->ALFIN1             <-------TEIL <---------REM1(1)         ---------   caattcatttaaattaatatcaggtggtggcggagattttcttttcagaaaccgatacattatttttgttgttgccttgcctacatacaaaaaataagaa  6659600            <---------YAB1                                           --------->YAB1          <---------ICU4                                        <---------YAB1          --------->YAB1                                        --------->ICU4     <---------AHL20(2)                                       <---------ICU4                ---------   ----------->TBP                                            --------->YAB1    <---------AHL20(2)  --------->AHL20(2)                                --------->LBD16 <-------TEIL--------->AHL20(2)  < -------->CBF                           <------------CBF     <---------YAB1   --------->TOE2(3)    -- ---->GLK1(2)  --------->At4g35610   --------->AHL20(2)  <---------DAG2       <----------DOF2 ------- >YAB1  --------->ARR11(3)       --------->YAB1   <---------LBD16--------->ATHB12        <---------YAB1   tcaatataaaaatcatgagttgaaacttaaatcaaacataaaaattgttttctccgtggccttatcatgattcatgacaactttaatttttgtcattagt  6659700                                                                              xxxxxxxxxxxxxxxxxxxxxxx                                                                            <---------TOE1(3)       -    <---------At5g28300                                                     <---------TOE2(3)       < >ICU4<---------ZAT6                                                     <---------MYB52(2)      ---- ---------ICU4 <---------AHL20(2)                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ------->ICU4  --------->AHL20(2)      --------->TOE2(3)         <------------CBF  ---------->DOF2 -- ---->GT1     --------->AHL20(2)      --------->REM1(1)     ----------->GT1--------->MYB52(1)  <-----   aaaaattactgtgagattaaattagaaactaaaacaaactacatcaaaaattaagaagaaaacagtatattgacgactaacgttacaaagaaaactcatg  6659800        <------------CBF  ----------->TGA1                                                 ------->TEIL >smallRNA(se3)                                               --------->MYB52(1) -------->YAB1                    <-----------GT1         --------->YAB1 ---------ICU4                    --------->YAB1       --------->WOX13(1)    --------->ANAC55(2) ----->YAB1               >>>>>>>>>WRKY18             --------->AHL20(2)  <----------DOF2        <--- ------->ICU4     --------->AHL20(2)                  <---------AHL20(2) <---------ANAC58        <--- ----YAB1         <---------AHL20(2)                 --------->AHL20(2)  <---------ANAC58      <-----   aataatgacgaattgagtttttaatttttgacagaataacaacaccaaaaactaaattaatcacaaacgaattttgcttaagtgatcaaattgaaattgg  6659900                                           --------->AHL20(2)                                         --------->AHL20(2)                                         <---------AHL20(2)                                       --------->AHL20(2)                                     <---------AHL20(2)                                     --------->AHL20(2)                                   <---------AHL20(2)                                 --------->AHL20(2)                                 <---------AHL20(2)                                           <xxxxxx                               <---------AHL20(2)      ---------->DOF2                      <xxxxxxxx                               --------->AHL20(2)<---------AHL20(2)                       xxxxxxxxxxx           <-----------GT1--------->AHL20(1)     --------->AHL20(2)               xxxxxxxxxxxxxxxx>smallRNA(i)         <---------AHL20(2)  <---------AHL20(2)<---------AHL20(2)             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)     --------->AHL20(2)   <---------AHL20(1) --------->AHL20(2)            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     <---------AHL20(2)  --------->AHL20(2)<---------AHL20(2)           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  ----------->GT1    --------->AHL20(2)<---------AHL20(2)             xxxxxxxxxxxxxxxx>smallRNA(i) ------WOX13(1) --------->AHL20(2) --------->AHL20(2)<---------AHL20(2) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) -----P  --------->AHL20(2)--------->AHL20(2)<---------AHL20(2)   --------->TOE2(3)     --------->TOE2(3) ----MYB46(3) <----------DOF2--------->AHL20(2)--------->AHL20(2) --------->TOE1(3)     --------->TOE1(3)   ttgatagttaattaaactttatataaaatatatatatatatatatatatatatatataaaagagtttaccttgaaatctatagtctcgagccttaatctg  6660000                                                                               --------->ATHB51                                                                               <---------AHL20(2)                                                                               -------->ATHB1                                                                               <--------HAHB4                                                                               --------->AHL20(2)                                                                              --------->ICU4                                                                              <---------ATHB51                                                                      ------->MYC3                                                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                 ----------->RAV1(1)              --------->ATHB12                                  --------->ANAC58                  ---             <---------YAB1                                     --------->ANAC58            <--------             --------->ICU4                                     --------->bZIP60(2) --------->MYB59    <---------TOE2(3)                     --------->At4g35610   --------->ANAC46    <---------TOE2(3) xxxxxxxxxxxxxxxxxsmallRNA(si3)           ----------->GT1       --------->O2  <---------ATHB12    --- xxxxxxxxxxxxxxsmallRNA(se3)        <------ZmHOX2a(1)       -------->P<-------MYC3  <---------TOE1(3) xxxxxxxxxxxx>smallRNA(fl3)   ---------->DOF2              <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  <-----   attttcaaggatgtgatgattgtataaaaaacaaaagaggaagaagctaaattgtttttggctaccacgacacatgttcaattatttaggttttttactt  6660100  Previous    Next  AGI:  At1g19260.1    Description:  hAT dimerisation domain-containing protein. similar to hAT dimerisation domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G29765.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G29763.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G09660.1); similar to H1005F08.16 [Oryza sativa (indica cultivar-group)] (GB:CAH65987.1); similar to Putative hAT family dimerisation domain containing protein, identical [Solanum demissum] (GB:AAT38794.1); similar to putative transposase [Oryza sativa (japonica cultivar-group)] (GB:AAL86479.1); contains InterPro domain Zinc finger, TTF-type (InterPro:IPR006580); contains Inter Range:  from: 6657251    to: 6659560    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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