Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           ------>ZmHOX2a(2)        <------ZmHOX2a(2)       <---------ARR14(2)                                                         --------->HSFC1(2)       --------->ARR14(2)                                                         <---------HSFB2a(1) <---------GLK1(1)                                                                <---------HSFC1(2) <---------HSFB2a(1)                       ----------->RAV1(1)      <---------WRKY12 ---------ARR14(2)                      --------->ANAC46           --------->WRKY18(1) -------->GLK1(2)                      --------->LBD16            <-----------HVH21 -------->ARR14(2)                    <---------ANAC46   --------->ANAC58        ----------->ARR10 ------->ARR14(2)                     <---------ANAC58   --------->ANAC58       <------ZmHOX2a(1) --------GLK1(2)                      <---------LBD16   --------->SPL7  ------->GAMYB ----->LBD16                          <---------ANAC58 <---------MYB52(1) --------->At4g35610 ---->HSFB2a(2)                      <---------LBD16  <---------RAP2.6(3) ----------->RAV1(2) -----HSFB2a(2)                 <---------GLK1(2)     <---------SPL7<---------WRKY38(1) ----LBD16             <-----------------AGL1        <---------ANAC46  --------->MYB46(3) <----------   agaatctccgatctgaacagcaacttcccatacaggttttccgggcaacaagttgccgtaagcaccaaggtcaaccatctgaggagtttcgccatcaccg  6652700                                                                                    <---------ARR11(3)                                                                                    --------->ARR11(3)                 --------->TOE2(3)                                                 <---------CCA1(2)   --------->TOE2(3)                            <------ZmHOX2a(2)        --------->ANAC46   <---------MYB59  ---------->DOF2            --------->ARR11(3)        --------->ANAC58         --- ------->TEIL    --------->TOE1(3)             <---------ARR11(3)   --------->GLK1(2)          <----- -HVH21      --------->WRKY12        ------->TEIL      --------->ATHB12  --------->ANAC58      ------   atgaaccttacttcgatgaccttagagccaaacttcatgaatttgagaagatcaaaatgtttggcataagattccaagtaatctaatatctcaaggtaag  6652800                                                                                                   --                                                                                               <-----                                                                                               ------                                                                                              -------                                                                                              -------                     --------->ATHB12                                                         <------                     -------->ATHB1                                                           <------                     --------->ATHB51                                                      --------->ZAT14  ---------->DOF2   <---------YAB1                                                         <---------ZAT14 ------>ALFIN1   <-----------------AGL3  <------NtERF2                                     <---------ZAT18 ----AtMYB61  --------->At4g35610 ---------->DOF2                   --------->YAB1         --------->ZAT18 --->DAG2 <-----------HVH21    --------->AtLEC2 --------->ANAC55(1) ----------->GT1 <---------ANAC55(2)   gtgggaaagttgtgtcatctctattattgggccatggaaagtcggagaactcgtaatcgactcgagccgattgtaatttagtcgtctcgtaagtgcagct  6652900                                                                              <---------At4g35610                                                                          <---------ARR14(2)                                                                          --------->ARR14(2)                                                                      --------->At4g35610                                <---------ARR14(2)                    <---------At4g35610   ---------     <---------ALFIN1    --------->HSFB2a(1)                       <---------At4g35610   <---------ALFIN1 ---->ZmHOX2a(1)         --------->HSFC1(2)                        --------->At4g35610  <---------ABI4(2) ----ARR14(2)            <---------HSFB2a(1)                      <---------RAP2.3(1)   --------->ZAT2 --->ARR14(2)         --------->LBD16                            <---------RAP2.6(2)   --------->ANAC58 -->At4g35610     <---------ARR14(2)                             <---------RAP2.3(2)   --------->ANAC58 -->ZAT2    ------>NtERF2<---------HSFC1(2)<--------P           <---------At4g35610--------->ZAT6 ---At4g35610     --------->ARR14(2) <-----------HVH21    --------->ARR11(3)  --------->LBD16  <----- ---ZAT2--------->DEAR3(1)      --------->ARR14(2)        <---------ARR11(3)  --------->At4g35610   cctccaaacacctccgactgaatccgaggcttcgaatacggtcgggttgtgatgaactaagttcttagcggctgctaatccgctaacaccagcaccgatg  6653000                                   --------->ANAC58   <---------YAB1                         --------->YAB1 <---------At4g35610       --------->HSFB2a(2)         --------->ANAC58--------->ARR14(2)       <---------HSFB2a(2)         --------->ANAC46<---------ARR14(2) >DEAR3(1)              <---------YAB1  --------->At4g35610                                <------ZmHOX2a(1) ----ATHB12        <---------At4g35610  ----------->RAV1(2)          *TSS             <------ZmHOX2a(1)   atggctactctcgaagaagtaagcttatcatagttagaagccatctgagagaggttatgctagagagaagagagattaatggttttgaggagaggaatgg  6653100                                                                               --------->ZAT14                                                                     <---------ANAC46                                                                   <-----------HVH21                                                                 <---------MYB46(3)                                              --------->YAB1     <---------DEAR3(2)      <-----------RAV1(2)                                  <---------AtLEC2  <---------ARR11(3)        <---------ANAC46                      <---------ANAC58        <---------AHL20(2)--------->ETT(1)       <-----------HVH21                      <---------ANAC46      <-----------TBP   <-----------HVH21<---------ZAT14                      <---------ANAC58 ------->TEIL --------->ARR11(3)      <---------ANAC46<------ZmHOX2a(1)   ttttgatgaagagtgttttgagttgtttgtgagtttgcatgaacatatttataagatgtttttgggtcgggtcgggtattgtgtagtcgggtcaggaatg  6653200               ------->MYC4               <-------PIF4               <-------PIF5               ------->MYC3                              <------ZmHOX2a(2)               <-------MYC3                              --------->CCA1(2)               <-------MYC4                             <---------AGP1               <-------MYC2                             <---------ARR11(3)               ------->PIF4                             <-----------ARR10               ------->PIF5                         ---------->DOF2               ------->MYC2                   <------MYB83------>ZmHOX2a(2)              --------->ANAC55(2)             <------MYB46(1)              <---------ANAC55(2)            --------->MYB59                                    <----             ------------>OsbHLH66          <--------P  --------->ARR11(3)                     <-----            <------------OsbHLH66        <---------HSFB2a(2)                                  <------ --------->AHL20(2)                      --------->HSFB2a(2)                                 <------- <---------AHL20(2)<----------DOF2      <---------ANAC46--------->AGP1                       --------   agttttattagggagcacgtgcttttgaatattagtttagtttcgagtaggtttgaaagatctaaactgttttttttttatcgctgagaaattttgtggt  6653300                              <---------AHL20(1)         <---------HSFB2a(1)  --------->AHL20(1)         <---------HSFC1(2)   --------->AHL20(2)      <------ZmHOX2a(1)       <---------AHL20(2)     ----------->GT1<---------ANAC58                                     --------------->AtSPL8 -----YAB1          <---------ANAC58           <---------ANAC46  <---------AHL20(2) --GAMYB --------->HSFC1(2)   --------->ARR11(3)             ----------->GT1                        - ---MYB46(3)  <---------HSFB2a(2)            <----------DOF2 <---------ZAT6                         < --TOE2(3)    --------->HSFB2a(2)  <---------AHL20(2)      <---------ANAC58                         < -->ID1  --------->HSFB2a(1)  <---------ARR11(3)           <---------ANAC58    <----------DOF2      -   tattgtgaggaaatttctgcaagcgtgagaaatatattaaaaattcgctttgtgtatttgttcgtgttaaatttctaagtactttcaagaagtctaatgg  6653400               <---------AHL20(2)               --------->AHL20(2)                                                       ------>MYB83           ----------->GT1        <---------ANAC58                                      ------>MYB46(1)        <----------DOF2     <-----------GT1                                             --------->MYB52(1)   <-----------GT1         <-----------GT1                                            <---------MYB59 -------->AHL20(1)   <------MYB83 <---------ANAC58                                    --------->MYB46(3) ---------ARR11(3)   <------MYB46(1)                                          --------->AHL20(2)----- ---------AHL20(1)  --------->MYB59<----------DOF2             <---------ARR11(3)    --------->ANAC46 -------->ARR11(3)  <---------TOE2(3)  ---------->ID1          --------->ARR11(3)  <-----------GT1   aatattttctcttttgttaaattaggtttttaacttgctttgtcttcttgaatatgaacaattaagagcttcttagtctataaattgacccaactgtatt  6653500                <---------AHL20(2)                                   <---------DOF5.7(2)             <---------GLK1(2)                                     --------->DOF5.7(2)   --------->AHL20(2)             --------->ARR11(3)                                   --------->TOE2(3)      <---------AHL20(2)             <---------ARR11(3)                              <---------YAB1<---------ARR11(3)           ----------->ARR10                 <---------GLK1(2) --------->ARR11(3)    ------>ZmHOX2a(1)       <-------TEIL               ----------->GT1           --------->AHL20(2)   ------>ZmHOX2a(1) ---->AHL20(2)<---------RVE1(1)  ----------->GT1            --------->YAB1<---------GLK1(1)      ----   atatacaaatgcatagatttttttatatcaaaaataggtttaaaacaaattcttggttccattaatatcgttatcgaaatctccttcctatttaaaatgt  6653600  Previous    Next  AGI:  At1g19250.1    Description:  FMO1 (FLAVIN-DEPENDENT MONOOXYGENASE 1); monooxygenase. Identical to Probable flavin-containing monooxygenase 1 (FMO1) [Arabidopsis Thaliana] (GB:Q9LMA1); similar to flavin-containing monooxygenase family protein / FMO family protein [Arabidopsis thaliana] (TAIR:AT5G45180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65196.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43915.1); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; (InterPro:IPR001327); contains InterPro domain Dimethylaniline monooxygenase, N-oxide-forming; (InterPro:IPR012143); contains InterPro domain Range:  from: 6650520    to: 6653069    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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