Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           --------->HSFB2a(2)                                                                                         <---------HSFB2a(2)                                                                                      --------->ARR11(3)                                                                                      --------->GLK1(2)                                                                     --------->ARR11(3) <---------LBD16                                                     <---------GLK1(2)                <---------ARR14(2)                                                     <---------ARR14(2)       ----------->GT1              <-------TEIL                           --------->ARR14(2)  --------->AHL20(2)  -------- --------->AHL20(2)        --------->YAB1--------->YAB1     <---------------AGL15   <---------AHL20(2)   aaattgaataacaaaattcattttttcaatgagaaaatcacaaacatgaaatgcagaaactccttgatgaagaaattgaatagtataaaatctggaaaag  6632700                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                -----                                                                                                -----                                                                                                <----                                                                                       <---------AHL20(2)                              <---------TOE1(2)                                   --------->ANAC58                      ------->TEIL                                                ----------->GT1<---                    <---------ZAT18                                               <----------ID1-----               <---------ANAC58                                          --------->HSFB2a(2)    <----               <---------ANAC58                                          <---------HSFB2a(2)    -----  ----------->GT1  <---------ANAC58         --------->GLK1(1)   --------->YAB1    --------->ANAC58  < ----------->GT1   <---------ANAC58         <---------GLK1(1)<----------DOF2---------->DOF2     ----- -->DOF2   ---------->DOF2 --------->MYB52(2)              <---------At4g35610  --------->MYB52(1)  -   aagaagataaatataaagcttgtgtaccttcgttggaacttggaagaaatccatttgatggagctttcatggtttatagaaagaacgaaaaaattggttt  6632800       --------->ANAC58       --------->ANAC58 <-----------RAV1(2) ------ANAC58                                                                             <---------AHL20(1) ------ANAC46                                                                             <--------ATHB1 ---MYB46(1)                                                                              <---------AHL20(2) ------ANAC58                                                                             --------->AHL20(2) ---->MYB52(2)                                                                            --------->YAB1 ---->MYB46(2)                             ------->TEIL                                   <---------ICU4 -----AtMYB61                              <---------ARR14(2)                            <---------ATHB51 ---MYB83                     <---------At4g35610--------->ARR14(2)                      --------->ICU4 ---->MYB111(1)               --------->At4g35610<---------ARR14(2)                      <----------- -----MYB46(3)          <<<<<<<<<TBF1      --------->GLK1(2)                        ----------->GT1 ---->MYB111(2)      <<<<<<<<<TBF1         --------->ARR14(2)                  --------->AHL20(2) ---------ZAT14  --------->ARR11(3)    <---------TOE2(3)             --------->ANAC58   <------------ ---->MYB55(2)   <---------ARR11(3)   --------->MYB52(1)             --------->ANAC58  --------->YAB1 -------->ZAT14 --------->GLK1(1)     <-----------GT1             --------->ZAT18   --------->YAB1   ggtgcagggaagaaacagagttcttcttcttcagcaaaattaacgaatctgtatttgctcaagagaagagcacgagagaaactaaatagtaataattttg  6632900                              <----------ID1                     <---------TOE1(3)                 --------->At4g35610                 <---------At4g35610              <---------At4g35610        <---------ICU4    ---------->DOF2                                                       <----       <---------ATHB12<------ZmHOX2a(1)                                                     <-------     --------->YAB1  <---------TOE2(3)      <-----------GT1                       --------->ANAC58 ----AGL15    --------->At4g35610       <----------DOF2                           --------->ANAC58 -----AGL3   <-----------RAV1(1)   ---------->DOF2<----------DOF2               ---------->DOF2 -----   gaaacaaaaatcattctgctgctaaggaaaaagaaacaaaagcttttttcttctttttagttcataagaatatttgaagcttcaaagcaaatttttaagc  6633000                                             --------->GLK1(2)                                            <---------GLK1(2)                                            <---------ARR14(2)                                            --------->ARR14(2)                 --------->YAB1   ---------->DOF2                      <---------At4g35610                    --------->ATHB51 -----ARR11(3)       <----------DOF2--------->ARR14(2)                        *TSS           -------- ----GT1<----------DOF2             <---------ARR14(2)               --------->AHL20(2)   <---------TOE2(3) ---->ARR11(3)  <----------DOF2<---------ANAC46                  --------->AHL20(2)   <------------CBF   tcttaaaaagctttgaaacttttcttttttttctcgtgtttctgcagattctcaagtgttttttcaaaaaaataaaaacaataatcgatattgagattta  6633100                                                               <---------ALFIN1                                                            --------->ANAC58                                                            --------->ANAC46                                                            --------->ANAC58                                                           ------>NtERF2                                                          <---------ALFIN1                                                          <---------PCF2                                                       --------->ALFIN1                                                     <---------O2                                                     >>>>>>>>>>AtbZIP1                                                     --------->O2                                                     --------->TGA1a                                                     <---------ANAC58                                                     --------->bZIP60(1)                                                     <---------TGA1a                                                     <---------ANAC58                         --------->ICU4              <---------bZIP60(2)                          <--                       ---------->DOF2               <---------bZIP60(1)                      <------               <-------TEIL                          <---------ANAC46                        <-------             --------->ARR14(2)                 --------->At4g35610                       <---------ALFIN1             <---------ARR14(2)                 <---------At4g35610                    --------->PCF2        --------->ARR14(2)         <----------DOF2 <---------TGA2(2)                   <---------TCP20        <---------ARR14(2)      <---------ARR11(3)----------->TGA1                     <---------TCP15(1)  --------->ARR14(2)   ========================================bZIP_DOF               <-----------HVH21  <---------ARR14(2) --------->LBD16            ----------->RAV1(2)                  <---------DEAR3(2)  <------------CBF <---------LBD16 ============================bZIP_DOF             <---------DREB2C(2) ->CCA1(2)------>ZmHOX2a(2)     --------->ARR11(3)----------->HVH21                 --------->ETT(1)   agccgattgggatcggatacatgcggaaagatgaaatcttttcttatgccttctgacgtggcaccccacttgatgtcttcttcttgtcggtcccaccttt  6633200               <-----------GT1             <---------AHL20(2)          <---------MYB46(3)     <----------DOF2          <---------YAB1                                         <---------TOE1(2)    <------------------------ANAC81   <-----------RAV1(1)                      <----------DOF2    ---  <-----------GT1  <----------DOF2  <---------At5g28300                     <-----------GT1       --- -------AHL20(2)<-----------GT1    <-----------GT1                        <---------MYB52(1)   <----- ----DOF2  <---------YAB1    <---------AHL20(2)                      --------->GLK1(2)      --------- --DAG2  <---------AHL20(2) --------->YAB1                           --------->ARR11(3)    <---------YAB1   tttatttctttttatttttatcttttccgattataatttactgttgttggaaaaacagtccatggttttaaaatctgttaactttccctcgtttttataa  6633300                                                                                                    -                                                                                                    <                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                               <-----                                                                                              <------                               --------->GLK1(1)                   <---------ARR11(3)        --------                           --------->ANAC55(2)                     --------->AHL20(1)      <------MYB83                 <----------DOF2                                 <---------ARR14(2)        <------MYB46(1)          <---------AHL20(2)  --------->ARR14(2)                 --------->ARR14(2)       --------->MYB59      <---------AHL20(2)   <---------ANAC55(2)----------->GT1<---------LBD16          <------ZmHOX2a(1) ------>TOE2(3)  --------->TOE2(3)     <---------YAB1    ---------->DOF2            <---------TOE2(3) ------>YAB1  <-----------GT1 <---------GLK1(2)       --------->TOE2(3)            --------->MYB52(1) ------GT1--------->AHL20(2)  <---------ARR14(2)   <-----------GT1 --------->ARR11(3)--------->ICU4-- >YAB1--------->AHL20(2)  <---------LBD16    <---------TOE2(3) --------->LBD16   --------->TOE2(2) <-   ccatatttttaattttttactttagtaatacggattttcttatgaatgaggttataccataaacccggatatattgagaaaaacctaaggattaggttcg  6633400   ----------->GT1 --------->SPL7 ----->NtERF2 ------NtERF2                                                                        <----------DOF2 ------LBD16                      <---------AHL20(1)                                 <---------DAG2 ------At4g35610                  <---------ARR11(3)                              <---------ALFIN1 ----->At4g35610             --------->AHL20(2)                                --------->PCF2 ----DEAR3(1)   ----------------->AG <-----------GT1                        --------->ARR11(3) -TEIL        --------->ANAC46    --------->AHL20(1)                        <---------ARR11(3) ->ARR14(2)   --------->ANAC58    --------->ARR11(3)                    ---------->DOF2 --------->HVH21----------------->AGL1        ---------->DOF2       --------->HSFB2a(2)         ----- --------SPL7 --------->ANAC58   <---------AHL20(2)----------->GT1  <---------HSFB2a(2)      <-------   gcggaccgaaaattgcaagccaaatggggacttaaatattttctaatccaaagttgtaaactcttggttaccagaaaagatgtcccactttttttctttt  6633500                                                             ----------------->AGL1                                                             ----------------->AGL2                                                          <------MYB46(1)                                                          <------MYB83                                                         <---------AtMYB61                 --------->AHL20(2)                     <---------WOX13(1) <-------TEIL    --------->YAB1                       --------->ATHB12 ---->AHL20(2)  <---------YAB1                  <---------AHL20(2)                     <----------ID1 ---DOF2      --------->YAB1                    --------->AHL20(2)             --------->LBD16   atatacatattttctgttataatatagtagtagctaataagtttattcatttatatggattggtccaaattgagacatgtccgtataatgcgagaaaaaa  6633600  Previous    Next  AGI:  At1g19220.1    Description:  ARF19 (AUXIN RESPONSE FACTOR 11); transcription factor. Identical to Auxin response factor 19 (ARF19) [Arabidopsis Thaliana] (GB:Q8RYC8;GB:O49961;GB:Q9LMA4); similar to NPH4 (NON-PHOTOTROPHIC HYPOCOTYL), transcription factor [Arabidopsis thaliana] (TAIR:AT5G20730.2); similar to NPH4 (NON-PHOTOTROPHIC HYPOCOTYL), transcription factor [Arabidopsis thaliana] (TAIR:AT5G20730.3); similar to NPH4 (NON-PHOTOTROPHIC HYPOCOTYL), transcription factor [Arabidopsis thaliana] (TAIR:AT5G20730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65203.1); similar to auxin response factor 1 [Cucumis sativus] (GB:BAD19061.1); similar to Auxin respo Range:  from: 6628059    to: 6633078    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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