Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      <---------ZAT6                 <---------ICU4                 --------->YAB1                 -------->ATHB1                 <--------ATHB1                 --------->ATHB51                 --------->ATHB12                                       --------->ARR14(2)                <---------ATHB12                               ----------->RAV1(2)                <---------ATHB51                               <------NtERF2                --------->ICU4                                 <---------ANAC58              --------->WOX13(1)                               <---------ANAC58             ------------>ATHB5                               ------>NtERF2         <---------ZAT6                                      --------->ETT(2)   --------->ATHB12<---------YAB1                         =================RAV  --------->ICU4<---------YAB1                            <-----------RAV1(1)               ---------   tgtattgattagtgatcaattattgttagtattcgttatagtctgtttttctactagttattgtcgcctgtctaaatccccttgctatgggttatctcaa  6623500                                    <---------YAB1                                  --------->YAB1                                  --------->ATHB51                                  <---------ICU4                                          ------->TEIL             <-----------GT1      <--------ATHB1                                          -------->P<             ------->TEIL         <---------AHL20(1)                        <---------ARR11(3)    <--         <---------TOE2(2)        --------->AHL20(2)                        --------->ARR11(3)    ---      <---------ANAC46           --------->ICU4                            <---------CCA1(2)  ------>MYB46(1)      <---------ANAC58           <---------ATHB51                        --------->AHL20(2)   ------>MYB83      <---------ANAC58           <---------ATHB12             <---------ARR14(2)          <---------- >TOE2(3)<---------TOE1(2)     --------->YAB1    ------->TEIL --------->ARR14(2)<---------YAB1<------   aattagtttcgtatgtaactaattttgtaagaacaataatttttgttgacgaaccatactatcaaatactctaaattatatcttgataaatctacctatc  6623600                                                                                                  ---                                                                                                  <--                                                                                                 ----      <------MYB83                       ------>MYB46(1)                                      <------MYB83      <------MYB46(1)                    ------>MYB83                                        --------     --------->MYB111(2)               <---------MYB59                              <---------YAB1<--     --------->MYB111(1)               <---------MYB111(1)                        --------->YAB1 ---- --------P                            --------->ANAC55(2)                         <---------ICU4 ---- -------ANAC55(2)                   <-----------GT1                              --------->ICU4 <---- -------->GT1                  <---------ANAC58                             --------->LBD16  -------- -------AGL1                   <---------ANAC58           <---------YAB1   <---------ANAC55(2)<------MYB46(1) -----HVH21     <------------------------ANAC81        <---------AHL20(2)  ----------->GT1   --------   aggtaagtaggtgtgttttgttttcatttgtttacttgttacctactaatctcatattttatgattcaaattcaaacccgtgaattatgagttagtaggt  6623700   <-----------GT1 -------->GT1 ----MYB46(1) ----->MYB111(1) ->MYB46(2)                     ----------->HVH21                                                   < ----MYB83                     <-----------HVH21                                                    - ----->MYB59                  --------->O2       --------->AtMYB61                              ----- ----->MYB46(2)               <---------O2    ------>MYB83            --------->ZAT14      <------ZmHOX2a(2) ----P               ---------->DOF2          ------>MYB46(1)         <---------ZAT14     --------->ARR11(3) ->MYB59           <---------MYB52(2)       --------->AtMYB61    --------->ZAT14          <---------ARR11(3) ->MYB111(1)    --------->MYB46(3)          <---------MYB59      <---------ZAT14   <---------ANAC46 -   aggtttaacaacatgtcaacaactaaagaacaacgtgacatctaaaccaaaccaaaactatagagagttcagagtagtcgtagtctcgtagagatcattc  6623800                                                     <---------YAB1                                                    --------->TOE2(3)                                                   <--------HAHB4                                                   --------->ATHB12                                                   <---------ICU4                                                  <---------YAB1     ---------->DOF2                              --------->ICU4     <---------AHL20(2)                         <---------ICU4    --------->AHL20(2)                          --------->YAB1    <---------AHL20(2)                         --------->ICU4                                      <- ---------AHL20(2)                             <---------ATHB12                                 <---- -------->AHL20(2)                          ------>ZmHOX2a(1)                                   <---- ---->YAB1                                 <---------MYB59                --------->ARR14(2)   ------ ---------->TBP                        <----------DOF2                  --------->LBD16       <------   atataaataaatcgcataaacaccaaaatcaactcttaattctttcctaatcatcattaatctctaatggattccgaaatcgcattcgactattctccga  6623900                                                                                     <---------ARR14(2)                                                                                     --------->ARR14(2)                                                                                     <---------ARR11(1)                                                                                    <---------ARR14(1)                                         --------->LBD16                            <---------CCA1(2)                                        --------->ANAC58                          <---------ANAC46     <---------ARR14(2)                 --------->ANAC58  <-----------TGA1       <------NtERF2     --------->ARR14(2)                <---------HSFB2a(2)<-----------HVH21     ------>NtERF2    <---------CCA1(2)        --------->ANAC58            --------->DEAR3(1)     <-----------HVH21  <---------ANAC46           --------->ANAC58            --------->ANAC46      <---------DEAR3(1)  <---------ANAC58          --------->SPL7      <-------TEIL                   <---------ANAC46  <---------ANAC58        <---------SPL7--------->ANAC46 --------->DREB2C(2)   --------->DEAR3(1) --- --------ARR14(2)        <---------MYB52(2)  <---------HSFB2a(1)          --------->MYB52(1)      <-- -----TOE1(2)           <------NtERF2--------->SPL7   <---------ALFIN1   <---------ARR14(2)      <--- -----TOE2(2)        <------NtERF2 <---------SPL7 <-----------HVH21      --------->ARR14(2)      <--- --->LBD16          ------>NtERF2 --------->TOE1(1)  --------->MYB46(3)--------->LBD16   ---------->DOF2 ---TOE1(1)   --------->MYB52(1)  --------->TOE2(1) --------->SPL7    --------->LBD16------->TEIL<---   ggtttcgtatattcaagaacggtggcatcgaacgcctcgtacccgaaacattcgtcccaccgtcactaaatcccgaaaacggcgtcgtatctaaagatgc  6624000         --------->LBD16       <---------LBD16                                         --------->TOE2(2)     <-----------GT1                   ------>MYB83            --------->TOE1(2) --->NtERF2                            ------>MYB46(1)        --------->DEAR3(2) -------RAP2.6(3)                 <-----------GT1   --------->LBD16 ------ANAC58                --------->LBD16       <---------ANAC46 ------ANAC58               --------->ANAC46       <---------ANAC58                              <--- ------ANAC46              <---------LBD16         <---------ANAC58    ----------->GT1        <------   cgtctattcaccggagaaaaacctctctctccgcatttacctccctcaaaattccgtctatgaaaccggcgagaagaaaatcccactactcgtctacttt  6624100              <---------ICU4           --------->YAB1        <---------ARR14(2)                                              ------>NtERF2        --------->ARR14(2)                                             --------->DEAR3(1)       <------ZmHOX2a(1)                                              <---------MYB55(2)    <------NtERF2                                      <---------TGA1a--------->MYB46(3)   --------->LBD16                                 <-----------------AGL1  <---------DEAR3(1)                           <----------DOF2       <---------At4g35610  <---------ANAC58                             ==================bZIP_DOF  <---------ANAC58                      <---------At5g28300------------>AtMYB77  <---------ANAC46        =======================================bZIP_DOF<------NtERF2 <---------LBD16          <----------DOF2      <---------DAG2        --------->At4g35610 ------AtLEC2<---------YAB1            <-----------GT1 =================MYC_MYB ----DOF2 <-------TEIL  --------->At4g35610 <---------ALFIN1        --------->ANAC46   catggcggaggattcatcatggaaacagctttctctccaatttaccacacttttctcacatcggcagtttcagccaccgattgcatcgctgtctcagtag  6624200                                                                                                  ---                                                                                       ==============HOX2a_HOX2a                                                                                       ------>ZmHOX2a(2)                                                                                      --------->ARR14(1)                                                                                      <------ZmHOX2a(2)                                                                                      --------->CCA1(2)                  --------->GLK1(2)                                                   ===============HOX2a_HOX2a                  --------->ARR14(2)                                                 --------->ARR11(3)                  <---------ARR14(2)                                                 <---------ARR14(3)           <---------At4g35610                                                       <---------ARR14(2)           --------->At4g35610                                                       <---------ARR11(3)           <---------ZAT2                                          ==================================HOX2a_HOX2a           ----------->RAV1(2)                                   --------->ARR14(2)  --------->AGP1--          ------->TEIL                                           <---------ARR14(2)  <---------AGP1<-        <---------ZAT18                                          --------->ARR11(3)  --------->ARR14(3)        --------->ZAT18                             --------->ANAC58        <---------CCA1(2)    <---     <---------ANAC46            --------->TOE2(1)  --------->ANAC58      --------->YAB1      ------>ZmHOX2a(1)     <---------ANAC58        ------>MYB46(1)     ----------->HVH21 ------>ZmHOX2a(2) --------->ARR14(2)     <---------ANAC58        ------>MYB83    --------->ATHB12    ------->TEIL        <-----------ARR10   <-----------HVH21         -------->P     <-------TEIL         <---------ARR11(3)----------->ARR10   aataccgtcgtgcacctgagcatccgattccaaccttgtacgaagattcatgggacgcgattcaatggatcttcactcatatcacaagatctggtcctga  6624300                                                          --------->ZAT2                                                       --------->LBD16                                                      --------->DEAR3(1)                                                      <---------DEAR3(1)                                                     --------->ATERF1(1)                            --------->ZAT14          <------NtERF2               --------->ANAC58                      <---------LBD16               --------->ANAC46           --------->DEAR3(1) ------>ATHB12 --------->ANAC58          <---------LBD16<------NtERF2      <---------O2 ------->ARR14(2)           <---------ZAT14 <------NtERF2 --------->At4g35610 --------ARR14(2)           ---------->DOF2--------->LBD16<---------At4g35610 ------YAB1  <---------ALFIN1     <----------DOF2   <---------RAP2.3(1)<-----------HVH21      -------   agattggctaaacaaacacgccgatttcagtaaagtctttctcgccggagatagcgccggagctaacatcgcgcatcacatggcgattagagtagacaaa  6624400  Previous    Next  AGI:  At1g19180.1    Description:  JAZ1/TIFY10A (JASMONATE-ZIM-DOMAIN PROTEIN 1); protein binding. Identical to Protein TIFY 10A (TIFY10A) [Arabidopsis Thaliana] (GB:Q9LMA8;GB:Q8LAG5;GB:Q93Z09); similar to JAZ2/TIFY10B (JASMONATE-ZIM-DOMAIN PROTEIN 2) [Arabidopsis thaliana] (TAIR:AT1G74950.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65210.1); contains InterPro domain ZIM (InterPro:IPR010399) Range:  from: 6622085    to: 6623611    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g19190.1    Description:  hydrolase. similar to hydrolase [Arabidopsis thaliana] (TAIR:AT2G03550.1); similar to CXE carboxylesterase [Malus pumila] (GB:ABB89010.1); contains InterPro domain Alpha/beta hydrolase fold-3; (InterPro:IPR013094) Range:  from: 6623867    to: 6624968    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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