Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                <---------YAB1                       <---------WRKY18(1)                                    --------->AHL20(2)                      --------->WRKY38(1)                                     <---------AHL20(2)                      --------->WRKY12                                       <---------AHL20(2)                    <-------GAMYB                                       --------->AHL20(2)                   <---------MYB46(3)                                   <---------AHL20(2)                  >>>>>>>>>>>>WRKY18                               --------->AHL20(2)        --------               ----------->HVH21                                   <---------AHL20(2)        <-------               --------->WRKY45                                 --------->ARR11(3)          <--------               --------->WRKY38(1)                   <---------AHL20(2) <---------AHL20(1)  ---------             <----------DOF2                <---------ANAC58    <---------ARR11(3)--------->YAB1  <-- --------->DOF2--------->WRKY12             <---------ANAC58---------->DOF2  --------->AHL20(2)   <--   gtgaaagagtttaggctttgactgttgactggttctaacgcgttttgcttcttatttatacaaaaagattttattttattttaattagaaatattaagta  6621700                           <---------ANAC58      --------->ANAC55(2)  <---------ANAC58      <---------ANAC58   --------->ARR11(3)      --------->O2   <---------AHL20(2)      <---------ANAC58   <---------AHL20(2)                                                       ---      <---------O2   --------->AHL20(2)                                                          <--- ->ANAC55(2) --------->MYB59                                                               <---------ANAC58 --ANAC55(2) <---------AtMYB61                                                             <---------ANAC46 -------AtSPL8      <---------WOX13(1)<---------ARR14(2)                                   <---------ANAC58 ------>AtSPL8   <-------TEIL         --------->ARR14(2)                                <---------MYB52(1) --------DOF2<---------TOE1(3)       --------->GLK1(1)    ----------->RAV1(1)         --------->ANAC46 -------DAG2 <---------TOE2(3)       <---------GLK1(1)  --------->At4g35610   <---------ICU4   ------   ctttttagacgtgtttaggttgattaatttcttgttaacatatccgataaaaaaaaacagcaccaaaatcacgacgagaattatgcctacgttacgttga  6621800                                                                                                -----                                                                                             --------                                                                                           --------->MYB46(3)                                                                                          <<<<<<<<<<<                                                                                          --------->ANAC58                                                                                          --------->ANAC58                                                                                      --------->ANAC46                                                                                    <---------MYB55(2)                                                                                    --------->MYB46(3)   --------->ICU4                                                                   <---------MYB111(2) ---------->DOF2                                                          <---------YAB1--------->MYB46(3) --------->YAB1                                    ------->TEIL       <---------DAG2<---------MYB52(2) ------>YAB1         <-----------GT1            --------->AtLEC2      <----------DOF2------->GAMYB ------YAB1   --------->AHL20(2)         <---------ICU4            <-----------GT1 ------>MYB46(1)  - --->YAB1 <---------ZAT6          <----------DOF2<-------TEIL<---------AHL20(2)    ------>MYB83<-----   taataaagattagagataaaatgtaacctctcttctctttacatcattacatgcatcttgtgttttatttgactttattcttaccaacaaacaaccaatg  6621900                                                                   <---------ZAT14                                                             --------->ALFIN1         <-------TEIL                               <-----------TGA1     --------->MYB59                        --------->ANAC58------->MYC2 ------>GT1                               --------->MYB52(1)<-------MYC2 ->MYB52(1)                 --------->ANAC55(1)---------->DOF2     --------->ZAT14                 -- <<<<<<LFY       <------ZmHOX2a(1)       --------->ARR11(1) ------->MYC3  ------->TEIL             == -------->AHL20(2)          ----------->GT1 --------->ANAC58<-------MYC3<---------ZAT14    <---------GLK1(2) ----ATHB12 ----------->HVH21        ---------->DOF2<-----------HVH21   --------->ZAT14  --------->LBD16   gataaattaggctcgtgaaggagggcaaactcgtaatttcaaagaaacggaaagcgtcagaacgtggagaacagtgaaccgagacacattcccgattttt  6622000                             <-----------GT1                         <-----------TBP                   <-------MYC2                   ------->MYC3                   <-------MYC3                   ------->MYC2                   ------->MYC4                   <-------MYC4                                     <---------AHL20(2)                  <---------O2                                      --------->AHL20(1)            >>>                  <---------TGA1a                                   <---------AHL20(1)        <------ZmHOX2a(1)                  --------->ANAC55(2)                               --------->ARR11(3)       <------MYB46(1)                  --------->O2                       <---------AHL20(2)                      <------MYB83                  --------->TGA1a                   --------->AHL20(2)     <----------DOF2  ---------            --------->AHL20(2)                      --------->ICU4 <-----------TBP          ---------   <----------ID1 ================================bZIP_DOF       <---------AHL20(2)  *TSS  <--------P -------->DOF2    <---------ANAC55(2)   --------->DAG2           --------->AHL20(2)<------------CBF ===========================bZIP_DOF   ---------->DOF2         <---------YAB1    <---------AHL20(2)   ctaaagaaacaaaataaaacacgtgttttttataccataagtaaagtagtagtatttattaaactattaatatatagctttgttatattggaggtaggaa  6622100                       ------>MYB46(1)                       ------>MYB83                       -------->P                     <---------MYB111(1)                     --------->MYB46(3)                     --------->AtMYB61                     ------->GAMYB                    <---------ATHB12                    --------->DEAR3(2)                    <---------MYB52(2)                    --------->MYB46(3)                    <---------MYB55(2)                   ------>MYB83                   --------->ANAC58                 --------->AtMYB61                --------->MYB46(3)                                              --------->ANAC58              ------>MYB83                                                      --------->ANAC58              ------>MYB46(1)                                                   --------->ANAC46            <---------MYB59                                              ----------->HVH21            ------->GAMYB------->GAMYB                                 ==============================          --------->ANAC58                                             <---------TGA1a  <---------GLK1(1)------>MYB46(1)                             <-----------GT1--------->MYB52(1)  --- --------->ARR11(3)-------->P         ---------->DOF2   ------>MYB83   --------->O2               --- <---------ARR11(3)--------->ANAC58   ===========================================bZIP_DOF      ------ >>>>>>TBF1 --------->AtMYB61 --------->ANAC58          ------>MYB46(1)--------->TGA1a         ------ >MYB111(2)--------->MYB46(3) --------->ANAC58      --------->ARR11(3) <---------O2          -------- >MYB59   --------->ANAC58  ---------->DOF2         <---------ARR11(3) ==============================   gaagaactctgcaaccaaaccaaccaaccccaaagccaaacaaagttttatagagaccttccatttctccctctcgtgacaaacgcaatttgcagagaag  6622200      --------->MYB46(3)      --------->REM1(1)    ----------->RAV1(1) ------->GAMYB ========MYC_MYB                                                            <---------MYB52(1) ------>MYB52(1)                                                          <---------ANAC58 -------->RAV1(1)           --------->ARR11(1)                            <---------ANAC58         -- --->ANAC58                 <---------ARR11(3)               --------->HSFB2a(2)                <---- --->ANAC58             ---------->DOF2 <----------DOF2      <---------HSFB2a(2)       <---------AHL20(2) -->DOF2           >>>>>>>>>TBF1 <---------TOE2(3)           <---------HSFC1(1)        <---------YAB1 ===bZIP_DOF    >>>>>>>>>TBF1--------->CCA1(2)       <-----------GT1      <---------ANAC46     ------   caacagcaacaacaagaagaagaagaaaaagatttgagattactttgtatcgatttagctattcgagaaactcttgccgtttgaaagttttaattgttaa  6622300                                                                              --------->ZAT14                                                                              --------->REM1(2)                                 <-------GAMYB                               --------->ALFIN1                                <---------MYB46(3)                         --------->O2                                <---------DEAR3(2)                         ==========================                               <---------DEAR3(1)                          <---------ANAC46                  --------->KAN4(2)                                        <---------ANAC55(1)                 --------->HSFC1(2)                                        <---------ANAC58                 --------->HSFB2a(1)                                       <---------ANAC58                 <---------HSFB2a(1)                                       <---------O2                 <---------HSFC1(2)     <------NtERF2                      ========================== ------->ARR11(3)<---------KAN4(1)     --------->LBD16                     <---------TGA1a -----TOE2(3)    --------->KAN4(1)   <---------LBD16                       --------->TGA1a      ----- ---->DOF2      <---------KAN4(2)<---------MYB52(1)             <---------GLK1(2)               <----   agatgtcgagttctatggaatgttctgagttcgtcggtagccggagatttactgggaagaagcctagcttctcacagacgtgtagtcgattgagtcagta  6622400                             --------->At4g35610                             <---------At4g35610                         ------>ZmHOX2a(2)                        --------->CCA1(2)                        ==================HOX2a_HOX2a                        <------ZmHOX2a(2)                       <---------AGP1                       --------->AGP1                       <-----------ARR10                       <---------ARR14(3)                       --------->ARR14(2)                                               <------ZmHOX2a(2)                       <---------ARR11(3)      --------->ANAC58                        --------->ARR14(2)            <--------P <---------ARR14(2)      --------->ANAC58                        --------->AGP1           --------->At5g28300             --------->ANAC58           --------->HSFB2a(1)           <           <---------MYB52(1)<---------ZAT2--------->ANAC58           <---------HSFB2a(1) <---------ALFIN1       --------->MYB52(1)=================HOX2a_HOX2a --------->bZIP60(1)              <---------ARR14(2) ---------->DOF2       --------->ARR11(3)<---------ANAC58        --------->ANAC58      <---------ARR11(3) ===========bZIP_DOF  --------->GLK1(1)  <---------ANAC58        --------->ANAC58   ------>ZmHOX2a(1) ====================MYC_MYB --------->ZAT2--------->AtLEC2  ----------->GT1        --------->HSFB2a(2) ---->GLK1(2)         <---------GLK1(1)  <---------ANAC46    --------->YAB1         <---------HSFB2a(2) -----ARR11(3)  <----------DOF2    <------ZmHOX2a(1)  <---------bZIP60(1)    <----------DOF2    <----   tctaaaagagaacggtagctttggagatctgagcttaggaatggcatgcaagcctgatgtcaatggtaagaaaccttctctttctcctagatccacttct  6622500                                  <---------ARR11(3)                              --------->YAB1                            ------->TEIL                           <---------CCA1(2)                       <---------ANAC58        <-----------GT1<---------ANAC58 ---------->ID1        <---------ANAC46                                                    --------->MYB52(2) -----------GT1  <---------AHL20(2) ------>ZmHOX2a(2)                                   ------------>MYB.PH3(2) ------DOF2  <---------MYB52(1)   --------->ARR11(3)                    ---------->DOF2<---------ZAT6   tttttcgttttctctgttttttatttcttgaatcttgatcttgaaaacttttcaagaaaattttgaatcgatttcaaagaaattagggagagttagtttg  6622600  Previous    Next  AGI:  At1g19180.1    Description:  JAZ1/TIFY10A (JASMONATE-ZIM-DOMAIN PROTEIN 1); protein binding. Identical to Protein TIFY 10A (TIFY10A) [Arabidopsis Thaliana] (GB:Q9LMA8;GB:Q8LAG5;GB:Q93Z09); similar to JAZ2/TIFY10B (JASMONATE-ZIM-DOMAIN PROTEIN 2) [Arabidopsis thaliana] (TAIR:AT1G74950.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65210.1); contains InterPro domain ZIM (InterPro:IPR010399) Range:  from: 6622085    to: 6623611    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version