Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       ----------------                                                                                     <---------------AGL15                                                                                     --------------->AGL15                                                                                    ----------------- ---------AHL20(2)                                                                  ----------------- -----YAB1                                                                <---------AHL20(2) ---->ICU4                                                               --------->AHL20(2) -->YAB1                                <-----------GT1           ------>ZmHOX2a(1) ----------------- >ARR11(3)                         <---------YAB1          <---------CCA1(2)    <----------DOF2   gtttattttactcagagcctataaaacagagcattttctgattatccacctattagttctcttatctcctcgattttaaattctttacccaaatgagaaa  6567700              --------->GLK1(2)  <---------ARR14(2)  <---------GLK1(2)  --------->ARR14(2)                       <---------ANAC58 ->AG     --------->HSFB2a(2)              <---------ANAC58            --------->ANAC58 >AGL2    --------->HSFC1(1)             <---------YAB1                --------->ANAC58 >AGL1    <---------HSFC1(1)--------->AHL20(2)                         <<<<<<<<<<WRKY18 >AG      <---------HSFB2a(2)         <---------MYB52(1)           <-----------HVH21             ----   atcagatttgttcgagaaccttgagaaaaaaaaaatagtcgttatgcttgagtttctcaacttcagagtcgtcaagtcaaaacattgaagagtcttcgtc  6567800                                  ------->TEIL                                --------->ZAT18                                                     -                                <---------ZAT18                                                    <-                              --------------->AtSPL8                                               --                         ------>ZmHOX2a(1)                                                         <-                        --------->TOE2(3)                                                          <-     --------->LBD16   ----------------->AGL1                                        --------->GLK1(2)    <---------LBD16<---------HSFB2a(1)                                              <---------GLK1(2)   <---------LBD16 <---------HSFC1(2)                        <-----------GT1  --------->ANAC46     --  <---------LBD16  --------->HSFB2a(1)               ---------->DOF2          --------->O2   <------- ----->HSFB2a(2)   --------->HSFC1(2)         --------->AHL20(2)      --------->AHL20(2)<----------DOF2   tagactcggggaatttgaagaagtttcctcaatgtgtacttgattctataaaatataaagaatttacttcaattttttccacgagagattcttttaatgt  6567900              <---------ANAC58              <---------ANAC46        --------->AHL20(1)        <---------AHL20(2)        <---------AHL20(1)       --------->AHL20(2) -------->LBD16 --------->ALFIN1 --------HSFB2a(2)                                --------->ANAC58                                  - ------->HSFB2a(2)                        ---------->DOF2                                           - --------HSFC1(1)                     ----------->GT1                                               - ----------RAV1(2)                   --------->DAG2                                          <------- ------->HSFC1(1) ----------->HVH21 ---------->DOF2     <---------ATHB12                     <------- --TOE2(3)    <---------ANAC58 --------->AHL20(2) --------->ANAC58   --------->ICU4         ---------   tccagaagattatattgagtgtgacaattcatataaaataaagttaaagaagaagcaaatcaatagaagtcatatttgttcacgaacacaaggtttgacc  6568000   --------->MYB52(1) -------->YAB1 -------->ANAC55(2)                             <---------ARR14(2) -------->ANAC46                 <---------AHL20(2) --WRKY18(1)            ------->TEIL            --------->ARR14(2) ----GT1 <---------CCA1(2)     ----------->TBP <------ZmHOX2a(1)             --------------->AtSPL8 >WRKY38(1)          <---------YAB1     --------->MYB52(1)      *TSS        ---------->DOF2   atacataacgcgtctcttgaaatatgaatgtgtatataaacaaaacagaggaaccgagagaacatcacaaataaacttcaaagtacaaattccatttcga  6568100                                                                                                    <                                                                                                    <                                                                                                    -                                                                                                   --                                                                                =====================                                                                                ---------->DOF2    <-                                  --------->ANAC58                           ------>NtERF2         --                                  --------->ANAC58                       --------->ARR14(2)        <-                                  --------->ANAC46                     ------>NtERF2               <-                                 ------->TEIL                         --------->DEAR3(1)          <--                                --------->MYB52(1)                    <---------DEAR3(1)         <---                            --------->YAB1              --------->ALFIN1 <---------ARR14(2) <--------                            <---------ICU4       ----------->HVH21   --------->RAP2.3(1)    ---------                           --------->ICU4        --------->WRKY38(1) --------->ATERF1(1)    ---------                           <---------ATHB51      --------->WRKY12    <------NtERF2         <---------ARR14(2)                    --------->CCA1(2)          <---------At4g35610   <---------------------WRI1 -----      <----------DOF2      <---------ATHB12    --------->At4g35610  <---------RAP2.3(1)   <------NtERF2   ttttaaaacttttgagaagacgatatacaataatgaacggaacatcgtgggctgaccagtgggacaatagcggcgactctgccaaaggaggccgaatcgg  6568200         <---------TGA1a         --------->TGA1a         --------->O2         <---------O2        <------NtERF2       <---------RAP2.6(3)       ------>NtERF2       <-----------HVH21      --------->RAP2.3(3)      --------->DEAR3(1)      --------->RRTF1(3)      --------->RAP2.3(2)     <------NtERF2     --------->ATERF1(1)     --------->RAP2.6(1)     --------->ERF1     --------->DEAR4(2)     --------->RRTF1(1)     --------->ORA47(2)     --------->RAP2.3(1)    <---------ATERF1(1)    ------>NtERF2    <---------RAP2.3(1)    --------->ABI4(2)   --------->DEAR3(1)   <---------DEAR3(1)   --------->RRTF1(3)   --------->RAP2.3(2)  --------->RRTF1(1)  --------->ATERF1(1)  <---------ABI4(2)  --------->DEAR4(2)  <------NtERF2  --------->RAP2.6(1)  --------->ORA47(2)  --------->ERF1  --------->RAP2.3(1) <---------RAP2.6(1) <---------RAP2.3(1) <---------ORA47(2) <---------DEAR4(2) <---------ATERF1(1) <---------RRTF1(1) ---------RAP2.3(2) ---------DEAR3(1) -------->DEAR3(1) ------->At4g35610 ==================bZIP_DOF -----NtERF2 ------->ATERF1(1) --------At4g35610 --------ZAT2 -------ATERF1(1)                   --------->TOE2(3) ------DEAR3(1)     <---------At4g35610 -ARR14(2)          --------->At4g35610     --------->ANAC58                                     <--- >ARR14(2)          <---------LBD16--------->bZIP60(2)                                       <------- >GLK1(2)<---------ANAC46  --------->ALFIN1 --------->ANAC58       <----------ID1       ---------->DOF2 ---->At4g35610  --------->At4g35610<-----------HVH21    ----------->GT1               --------->AtMYB61   cagcggcgccgtcgtgagaagcagcggaagtggagcaacgtcaaacacgaccaagtacaaggagaaaatgggacaagggttagacaaaaccaaagctgta  6568300                                                             --------->ANAC58                                                             --------->ANAC55(2)                                                             --------->ANAC58                                                     <---------WRKY12                                                     <---------WRKY38(1)                     <-------                                                    --------->WRKY18(1)                      --------                                                   <-----------HVH21                    ---------->DOF2                                                  <------MYB46(1)                       --------->YAB1                                                  <---------ANAC46                --------->ANAC58                                                  <------MYB83 --------->YAB1 --------->ANAC58                                                 --------->MYB55(2)           --------->ANAC46                                              <-------GAMYB  <---------ANAC55(2)  --------->ANAC58                             <---------ARR14(2)  <---------MYB46(3)           --------->ANAC58      - ------At4g35610             --------->ARR14(2)<---------MYB52(1)           <---------ALFIN1<-------- --REM1(1)       --------->At4g35610     <<<<<<<<<MYB2   <------ZmHOX2a(1)--------->AtMYB61 ---------   gcttcttctggttttaagaagctcaagactggttctgctattggttttcgttgggtcaaggacaagtatcacaaaaccacacacaaacaataaagatttc  6568400                                            <---------ARR14(2)                                            --------->ARR14(2)                                         --------------->AGL15                                         <---------------AGL15                                        ----------------->AGL1                                        ----------------->AG       <----------DOF2            <-----------GT1 --GLK1(1)                    <---------AHL20(2) ->GLK1(1)                   --------->AHL20(2) -------->ZAT14              <---------AHL20(1)                ------>ZmHOX2a(2) -ARR11(3)                   --------->AHL20(1)                <XXXXXXXXXXXXXXXXXXXXMIR861-5P   <---- >ARR11(3)                   <---------AHL20(2)        <---------YAB1                --------->ATHB12   tgtaaactcctttgtatatgagtattagtaatttattcacttgccaaatactgtattatgtctgatctatatttttctaagcttgtttgatttgaatgct  6568500                                                                           -------->ATHB1                                                                           <---------ICU4                                          --------->AHL20(2)               --------->ATHB51                                          <---------AHL20(2)              <---------AHL20(2)                                  <-------TEIL                 --------->AHL20(2)      --------->YAB1                               <------MYB46(1)                 <---------AHL20(2)     <---------YAB1                               <------MYB83                  <----------DOF2  <-----------GT1                               <---------DEAR3(2)        ---------->ID1   --------->ICU4                              <---------MYB46(3)        <-----------GT1   --------->AHL20(2)         --------->At5g28300 --------->ALFIN1  --------->AHL20(1)         <---------ATHB51        ----------->GT1    <---------ANAC58    <---------AHL20(2)      --------->AHL20(2)   <---------At5g28300     <---------ANAC58    --------->AHL20(2)      <---------AHL20(2) <---------ZAT14           <---------ANAC46   --------->AHL20(2)      <---------AHL20(2)            - ------DOF2               <---------MYB46(3)  <---------AHL20(2)      --------->AHL20(2)  --------->YAB1   ttgtttactgtggtaaattgttcgagtttgggtgggttcatggattaattaaattgtttttctctttaatttttaaattattacatctataataacaacg  6568600  Previous    Next  AGI:  At1g19020.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G48180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40966.1) Range:  from: 6568064    to: 6568588    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version