Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                                                   --                                                          --------->ATHB12                         --                                                  ------>ZmHOX2a(2)                       --------->ANAC58                        --------->ANAC58         <---------At4g35610                      --------->ANAC46                        --------->ANAC46        <---------ARR14(2)                        --------->ANAC55(2)                  ------>MYB83                  --------->ARR14(2)                        <---------ANAC55(2)                  ------>MYB46(1)           <---------At4g35610                           --------->ANAC58                <---------MYB59           ---------->ID1 <---------YAB1                   --------->ANAC55(1)    --------->ARR14(2)  --------->ANAC58<-----------RAV1(1) <---------WOX13(1)     --------->HSFB2a(2)    <---------ARR14(2)<-----------GT1------->TEIL--------->At4g35610            <----------DOF2    <-   attccgaattcgcctcgacctaattcacgacctaagatgtatttgtcgctgatctgagtttgattgctcatagggattacatctttgagaacacgtattg  6525600          ----------->GT1        ------>ZmHOX2a(2)       <------ZmHOX2a(2)      <---------ARR14(2)      --------->GLK1(2)      --------->ARR11(3)      <---------ARR14(3)      <---------ARR11(3)      --------->ARR14(3)      <---------AGP1      --------->ARR14(2)     <---------GLK1(1)  <---------LBD16                 <---------AHL20(2)       <-----------GT1 --------->ALFIN1             ----------->GT1   --------->ATHB12 --------ZAT2         --------->LBD16        ------>ZmHOX2a(2) ------->At4g35610    ------>NtERF2         <------ZmHOX2a(2)                  <---------YAB1 ------->ZAT2        <---------DEAR3(1)    <---------ARR14(2)    <----------DOF2               ------ --------At4g35610  <---------LBD16        --------->ARR14(2)<---------RAP2.6(2)     <----------DOF2   gagctggggatctggtgaaatctccggcgaatgggtttaatttccgatctcgattgggttttttcggctttgaagatggttttgattcttttgagtctgg  6525700                                                                           >>>>>>>>>TBF1                                                                  --------->ANAC58                                                                  --------->ANAC58                                                                  <---------TOE2(3)           ------------>AtMYB77                                ============================HOX2a_HOX2a        <---------ANAC58                                     --------->GLK1(1)>>>>>>>>>TBF1       ---        <---------ANAC58                               ---------->DOF2  >>>>>>>>>TBF1    <---------HSFB2a(2)    <-----------RAV1(2)                    <---------At4g35610 <------ZmHOX2a(2)      <---------YAB1 ------------>SPL14                        --------->At4g35610--------->ARR11(3)    <------ZmHOX2a(1)   ccttacacaggcgttacagttacccatggctgagttaagaaactcagcaaactcagagaaaggagatcaaggaagaagaagaagaaggattatagaagaa  6525800                                           <---------DREB2C(2)                                          --------->ATERF1(1)                                          <------NtERF2                                     <---------DREB2C(2)                                     <---------DEAR3(1)                                     <---------ANAC46                                   --------->MYB52(1)  ------>NtERF2                                  ----------->HVH21    --------->LBD16         --------->ALFIN1                                  ----------->TGA1   <---------LBD16        <------MYB83                              <------NtERF2<---------ANAC46                 <------MYB46(1)                             --------->LBD16 --------->At5g28300          <<<<<<<<<MYB98           <-                           <---------LBD16<---------ABI4(1)               <--------P            -----                           <------NtERF2<---------DEAR3(1)               <-------GAMYB        <------          <----------DOF2 ------>NtERF2 --------->ALFIN1                <---------ANAC46   ----------      <---------CCA1(2)   <---------ATERF1(1)<------NtERF2              <------MYB46(1)   <---------ARR14(2)    <---------CCA1(2)    --------->ANAC46------>NtERF2<---------LBD16   <------MYB83 ----------->GT1< ------->DOF2            <---------DEAR3(1)<---------DEAR3(1)          --------->MYB59    --------->ARR14(2)   aaaagcttatctctttagttcatatggacgccggaagtgacggtggcggtgattttccggcgaattggagagttgggttgggagggggagagaaaacgcg  6525900     --------->ALFIN1               <---------ARR14(2)   --------->At4g35610              <---------GLK1(2)   <---------At4g35610          <---------LBD16 <-----------RAV1(2)         --------->HSFB2a(1)     *TSS                                   <-------- ----------HVH21      <----------DOF2   <---------YAB1      --------->DAG2           ----------->GT1 ---->LBD16          <---------DAG2 --------->ARR14(2)     ---------->DOF2         <---------ZAT14 ---LBD16  ---------->DOF2   <---------HSFB2a(1)     --------->YAB1             <---------ANAC46 >DOF2   <------ZmHOX2a(1)   <---------HSFC1(2)      --------->AHL20(2)       <---------ANAC46 -------TEIL--------->DAG2   --------->HSFC1(2)   --------->WOX13(1) <----------DOF2 --------->YAB1   ggttcaggtgaggaaaagtcggacctttcgaaatttcggattttgtttgattcaattaaaaaaaagggagtctttgatttttgtgtatagtaatatacag  6526000                                             <---------ZAT18                       <---------AHL20(2)                                          <------------CBF                        <---------AHL20(2)                                         --------->ATHB12                         --------->AHL20(2)                              <---------ARR11(3)                            <-----------GT1                              <---------GLK1(2)                           <------------------------ANAC81                    --------->ARR11(3)   <---------ICU4                 <---------AHL20(2)                --------->AHL20(2)      --------->MYB46(3)             --------->AHL20(2)      <-----                <---------AHL20(2)    <-----------GT1                  <---------AHL20(2)      ------               --------->AHL20(2) <-----------GT1                      <---------AHL20(1)      ------             ------->TEIL     --------->ARR11(3)                      --------->ICU4           <----- ---GT1<---------YAB1        <---------RVE1(1)   <---------ALFIN1----------->GT1  <---------AHL20(1)   tattagtttatgatgcatttaataacttgagagatttttctaaccattgcaccatcttcttagaaacttgtaattttttttcaattttttttttcttcta  6526100 ----HSFC1(1)                                       <-------GAMYB --->HSFC1(1)                                  <---------AHL20(2) --->HSFB2a(2)                           <----------DOF2 ----HSFB2a(2)       <---------YAB1<-----------GT1 <---------MYB46(3)<-----------GT1    <---------MYB46(3)   gatggattttttggtccaagcttatgactaatagaattcacttctttattttttggttgaactcagtggattaactcttgcatttttcagtggttttata  6526200                                      --------->YAB1                                     <---------YAB1                                                 <                                   --------->YAB1                                                 ---                                   <---------ICU4                                          --------->DREB2C(2)                                  --------->ICU4                                           <---------ETT(1)                                  <---------YAB1                                           ------->GAMYB                                --------->YAB1                <---------YAB1              --------->MYB46(3)                                <---------ICU4              --------->YAB1                --------->DEAR3(2)             --------->ATHB12  <---------YAB1              <---------YAB1           <---------ATHB12<           <---------ARR11(3)  --------->ICU4          --------->YAB1      <---------ARR11(3)  ------       --------->YAB1       <---------MYB52(1)      --------->YAB1     --------->YAB1--------->YAB1 -   aacaaacaaacaaaatcatttgtattttcagttattattattataagtttatattgatcatattatagttctatcaagatgtacaaatgataaccgacaa  6526300                                                             <-----------GT1                                                       <------MYB83             <---------AHL20(2) <--------ATHB1                                      <--------P              ------>MYB46(1) --------->YAB1                                   <---------TOE2(3)          ------>MYB83 ---------YAB1                                    <---------TOE1(3)  --------->AHL20(2)     --------- ------>YAB1                         --------->At4g35610  <---------GLK1(1)--------->TOE2(3)<-------- ---------ATHB12                    ----------->RAV1(1)<------MYB46(1)     <---------MYB59 --------->ICU4 ----->RAV1(1)                   ------->GAMYB  ---------->DOF2   ------>MYB83  --------->AHL20(2)  - -------->ICU4                <-----------GT1  <---------AHL20(2) ------>MYB46(1) ---------->DOF2 ---   caatgattttagaaaattcaaactcttagatttaacagcatcagaaaatttaaaggttggatttcaccaaattaaaacctaattaaaagagcatttattg  6526400                                                                                       <---------AHL20(2)                                             --------->MYB52(1)               <------MYB46(1)                                  --------->MYB52(1)                          <------MYB83 --------->YAB1 >ATHB12                    <---------RAP2.6(2)    --------->ZAT14           <---------AtMYB61 -AHL20(2)                 --------->RAP2.6(3)     <---------ZAT14        <---------MYB46(3) ---------->GT1           --------->MYB52(1) <-----------GT1  <------ZmHOX2a(1) <---------ANAC46 ------->DOF2          <---------ICU4   <---------YAB1     <------ZmHOX2a(1)<---------MYB52(1)   aaaagaaatataggcagacttcaaaacattacggccaaacgtataattaacagtttagcgaggaggacaatgttagccgttggtgtgaattaatggtaat  6526500  Previous    Next  AGI:  At1g18890.1    Description:  ATCDPK1; calmodulin-dependent protein kinase/ kinase/ protein kinase. Identical to Calcium-dependent protein kinase 10 (CPK10) [Arabidopsis Thaliana] (GB:Q9M9V8;GB:Q39015;GB:Q84W07;GB:Q9LME1); similar to CPK30 (calcium-dependent protein kinase 30), calmodulin-dependent protein kinase/ kinase/ protein kinase [Arabidopsis thaliana] (TAIR:AT1G74740.1); similar to CPK13 (calcium-dependent protein kinase 13), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT3G51850.1); similar to CPK7 (CALMODULIN-DOMAIN PROTEIN KINASE 7), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT5G12480.1); similar to un Range:  from: 6522755    to: 6525953    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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