Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             --------->LBD16                                                                         ------>ZmHOX2a(2)                                                                        --------->CCA1(2)                                                                        <------ZmHOX2a(2)       <---------ARR11(3)                                               --------->ARR14(1)    <---------MYB59--------->ANAC46                                    --------->ARR14(2)   ----------->RAV1(2)        ------>ZmHOX2a(2)                        --------->ARR11(1)  ------->TEIL     --------->ZAT6   --------->ARR11(3)                 <---------ARR11(3) ------------>AtSPL3    ----------->RAV1(2)                            <---------ARR14(2)  ---------- ------------>AtSPL8   --------->MYB52(1)    ---------->DOF2           --------->ARR11(3)  <--------- --->AHL20(2) --------->ARR14(2)    --------->GLK1(2)            XXXXXXXXXXXXXXXXXXXX>MIR774B       < ->ANAC58     <---------ARR14(2)    <---------ARR11(3)        --------->AHL20(2)          ----------- ->ANAC58------>ZmHOX2a(2)  <---------ARR11(3)      --------->YAB1 ---------->DOF2        -----------   aatgtacctgatctcaaatccacactacctgatctcaaaatctacaataaagaatcatacaaaatgaaataaagatccgagtaatgtctgtctccaaata  6504000           <---------ARR14(2)           <---------AGP1           <-----------ARR10           --------->ARR14(2)          <---------CCA1(2)        --------->ETT(1)      <-----------HVH21 <---------ARR14(2) --------->GLK1(2) --------->ARR14(2) <-----------ARR10 ----->AGL15                <---------ETT(1) ------AGL15            <---------GLK1(1)                   --------->LBD16  <---------ANAC58 ---------GLK1(2)       --------->GLK1(1)                  --------->ANAC55(2)<----------DOF2 ------>AGL2 ------>ZmHOX2a(2)                             --------->ANAC46  <---------ANAC58   <---- ------>AGL3<------ZmHOX2a(2)                     ----------->RAV1(1) ---------->DOF2           -----   gagaatctggtcggatctaatgtctgatttccgacaaaaactaagacgaagacaacagtacccgtgattaccaaaagatgctttccatttgcagtctcta  6504100               <---------DEAR3(1)                                                            --------               --------->ALFIN1                                                              <-------        --------->ZAT18                                                                      --------     <---------ANAC46                                                                        <-------   <---------ZAT14                                                <-----------GT1        --------->ANAC58   --------->ZAT14                                             <---------AHL20(2)        --------->ANAC58   --------->ZAT18    --------->MYB52(2)                       --------->AHL20(2)        --------->ANAC46  --------->ALFIN1<---------ZAT6    --------->ANAC46          <---------AHL20(2)       --------->MYB52(1) -----ZAT14    <---------AtMYB61 --------->ZAT18         <---------DAG2              <---------MYB52(2) ---->ZAT14 <---------DEAR3(1) <---------ZAT18           <----------DOF2 <---------AHL20(2) ------->TEIL   cagagtgtagtgcatcggtggtgttagttccagtgtccacgaagagagagagagaacaactttatttatttctattttaaaactaaaacaaacgcatctc  6504200       <---------ARR11(3)       --------->GLK1(2)       <---------ARR14(3)       --------->ARR11(3)                      <---------DAG2       --------->ARR14(3)                      <----------DOF2 ->At4g35610                         <---------MYB46(3)                                 ----------->GT1 --GLK1(1)                         <---------MYB52(1)                             <----------DOF2 ->GLK1(1) <-----------RAV1(1)   <---------MYB46(3)                               --------->TOE2(3) --At4g35610         <---------MYB52(1) <------ZmHOX2a(2)              --------->AHL20(2)    <-------   cgaattcaaaatcttgttgcaccgttcttctacagccgttggatcaatactttttccatcaacaaaaaaccaaaaaaatgaaaactttaatggaaaaaat  6504300                                                    <------MYB46(1)                                                    <---------ANAC55(2)                                                    <------MYB83                                                    --------->ANAC55(2)                                           ----------->HVH21                                          <---------WOX13(1)                          <------MYB83                                        --------->ATHB12                              <---------ANAC58                                        <---------ICU4           ----------->GT1      <---------ANAC46                   <-----------------AG--------->ICU4     <---------AHL20(2)          <------MYB46(1)            <---------ANAC55(2)        <---------YAB1     --------->AHL20(2)          <---------ANAC58          --------->AHL20(2)         --------->YAB1 ----------->GT1                  <---------MYB46(3)         <---------ATHB12           <---------YAB1 --------->MYB59                   --------->MYB59       --------->WOX13(1)         --------->YAB1 --------->ARR14(2)             <------ZmHOX2a(1) --AHL20(2) --------->ANAC55(2)  --------->ICU4  <---------ARR14(2)     ---------->DOF2      XXXXXXXX   tgctactaccaattaagtatcaacacaattgggaaatgatgataattgacagataggtaatttaagaaggtgaagaaagttaggagttgggtagtcccca  6504400                                           --------->ICU4                                      --------->ANAC55(2)                                      <---------ANAC55(2)                                      <---------ANAC58    <---------At4g35610               <---------ANAC46    <---------ZAT2                    <---------ANAC58             <-----------GT1    --------->At4g35610           --------->At4g35610    --------->HSFB2a(2)    --------->ZAT2                <---------ZAT2         <---------HSFB2a(2)                    -----    *TSS  <----------DOF2         --------->ZAT2        <---------LBD16                 <<<<<<<<<TBF1 <---------ZAT14                  <---------At4g35610 <---------ARR14(2)             <<<<<<<<<TBF1--- <---------At4g35610  ----------->GT1<-------TEIL     --------->ARR14(2) <---------ANAC58       ----- XXXXXXXXXXXX>MIR2111A*         <-----------RAV1(2)  <---------GLK1(1)   <---------ANAC58       -----   gactgcagcttactttgtgaacaagtgtaataactcagctgcgtaactatgaagcatttctggatgtaattacattcttgccccttcttcttcttcaacc  6504500                                                             <---------O2                                                             --------->TGA1a                                                             --------->O2                                                             <---------TGA1a                    -----                                                             <---------ANAC58                  ------                                                             <---------ANAC58           <-----------GT1                                                             <---------ANAC46          <---------YAB1                                --------->TOE2(3)        <---------ARR11(3)    --------->MYB52(1) ---          <---------MYB59 <---------YAB1                 --------->ARR11(3) XXXXXXXXXXXXXXXXXXXX>MIR866-5P ---->TOE1(3)     <---------ANAC58                  <------NtERF2          --------->DAG2   <-------- ------->CDC5     <---------ANAC58                <---------RAP2.6(2)     ---------->DOF2 <---------YAB1 ---->AtMYB61     <---------ANAC46      <---------MYB52(1)   ========================bZIP_DOF <------ ---->TOE2(3)  <----------DOF2<-------TEIL       <---------LBD16   <---------ZAT6 ----------->GT1 <--   tcagcgagagtacctcactttcgtggtgatgatacattagccgtttgattttgcggcaaggtctcgtgagtgttcataaaggaacggtttttattatccg  6504600  <-----------HVH21 ---->LBD16                    <---------At4g35610 --->ANAC46            --------->MYB46(3) ------>ARR14(2)     ----------->RAV1(1)                                       <-----------GT1 ---GT1        <---------MYB52(1)                   <---------At4g35610     <----------DOF2 ---LBD16<---------HSFC1(2)    <---------ZAT18      --------->At4g35610 <-----------GT1    <---------REM1(1) -------ARR14(2)--------->WRKY38(1)          ---------->DOF2        --------->YAB1      ------>ZmHOX2a(1)   gctctgtgagacacttcgttgagcaacaacttgtgctcattcttcaacaaagtaagctgttgtattgcaaagataaaccttttactcttcctgttgtaac  6504700                                                                              <----------ID1                                                ------>ZmHOX2a(1)           <------MYB46(1)                                       <---------ANAC46                   <--------P                                      --------->ALFIN1                  <---------MYB46(3)                                      <-----------RAV1(1)              <---------AtMYB61                                     ------->MYC3                  --------->ZAT18                                     <-------MYC3                  <---------ZAT14                 --               ---------->DOF2 <-----------GT1 --------->TOE2(3)   --------->ZAT14                 <- ---------->DOF2           --------->YAB1 <-------TEIL   <---------WOX13(1) <------MYB83  ---------->DOF2   tgataaagaattcttggaaaagaaaacaattttaaaccatgtggtgcatcctaaatgagattggcaatgtgcagaggttggagacaaactctcaaagata  6504800                                                                         ----------->GT1                                                                       ---------->DOF2                                                                     <---------AHL20(2)                                                                     --------->AHL20(2)             <----------DOF2                                      --------->YAB1        --------->YAB1                ----------->GT1            <---------YAB1                     - ------->ZAT18               --------->At4g35610         --------->ZAT14--------->DAG2         <----- --------ZAT18          --------->CCA1(2)          <-----------HVH21 --------->YAB1            ------   gcgaacaaaattatactttagttaagagatgaactgaaactagaaaatacaaatgtcactggagaccataataaaaagtgaaaacagggttgcattaagc  6504900  Previous    Next  AGI:  At1g18840.1    Description:  IQD30; calmodulin binding. similar to IQD31 (IQ-domain 31), calmodulin binding [Arabidopsis thaliana] (TAIR:AT1G74690.1); similar to calmodulin binding protein IQ [Brassica rapa] (GB:BAF81526.1); contains InterPro domain IQ calmodulin-binding region (InterPro:IPR000048) Range:  from: 6500839    to: 6504404    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g18850.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN63140.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62515.1) Range:  from: 6504797    to: 6506415    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version