Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     <---------TOE2(3)                                  <---------DOF5.7(2)                                --------->DOF5.7(2)          <-----------GT1                           <---------DEAR3(1)             --------->TOE1(3)                         <---------ARR14(2)               --------->TOE2(3)          <---------ATHB12 ------>ZmHOX2a(2)           ----------->RAV1(1)            <-------TEIL   ----------->GT1       --------->ARR14(2)           --------->ANAC46     <-------TEIL --------YAB1  --------->YAB1  <----------DOF2      <-----------GT1  <-------TEIL--------->AHL20(2)   caagattgaaaaatcattcatcatatagatcggcgttaatgtaagtagttgaatatacaacattaaccatatacatatacatataaaatacatctcgatc  6496000                                                                  <----------DOF2                                         <----------DOF2         <---------ANAC58                              --------->ARR14(2)                 <---------ANAC58                              <---------ARR14(2)            <---------ANAC58              <------ZmHOX2a(2)   <----------DOF2           <---------ANAC58                        <      <---------ATHB12      --------->HSFC1(2)           <----------DOF2                            <    --------->WOX13(1)      <---------HSFB2a(1)         <---------DAG2                              <  <---------AHL20(2)        --------->HSFB2a(1)     <---------MYB52(1)        <-----------GT1     <--  --------->AHL20(2)  ---------->DOF2 <-----------GT1<-----------GT1      <----------DOF2        <---   taatataaatcaatagatcaaatccaaagcaggttccttttttctttgttttcagttacctttcttggcttttcttcttttttccatcttcgttcatcag  6496100                                                                                          ---------->DOF2                                                                                       <-----------HVH21                                                                                      --------->ANAC58                                                                                      --------->ANAC55(1)                                                                                      ===============bZIP_DOF                                                                                      --------->TGA1a                                                                                      --------->bZIP60(2)                                                                                      <---------TGA1a                                                                                      --------->ANAC46                                                                                      <---------O2                                      --------->REM1(2)                               --------->O2                                      <-----------HVH21                          --------->ZAT2                                    --------->LBD16                              <---------At4g35610                                   <---------ANAC46                              <------NtERF2                                --------->TOE2(2)                                <---------ZAT2                                ------->GAMYB                     ----------->HVH21   --------->ANAC58                               --------->MYB46(3)               <---------At4g35610 <---------ALFIN1                            --------->MYB46(3)              --------->GLK1(2)--------->ANAC46             <------ZmHOX2a(1)-------->P                   --------->KAN4(2) --------->ANAC58 ---------ANAC58          --------->ANAC46        <---------LBD16<-----------HVH21<---------ALFIN1 ---------ANAC58          --------->ANAC58--------->At4g35610   --------->LBD16  --------->At4g35610 ---------ANAC46          --------->ANAC58<---------At4g35610 <---------LBD16--------->ANAC58 -------MYB46(3) --------->ARR14(2)<---------ANAC58 ----------->GT1        <-----------RAV1(2) ------MYB52(1)  <---------ARR14(2)<---------ANAC58 --------->LBD16      ----------->RAV1(1)       --   ttgtttgcattcggaggagaatactcacaaacaacctccgtgtcaacttccctccggtgaaaattccggtgacagccacaggcagcacacgtcaaagcat  6496200                                              <---------RAP2.6(3)                                              ------>NtERF2                                              --------->LBD16                                             --------->ATERF1(2)                                             --------->DEAR3(1)                                             <---------ATERF1(2)                                             --------->ANAC46                                             --------->RAP2.6(2)                                             --------->RAP2.3(3)                                             --------->RAP2.3(2)                                             >>>>>>>>>AtERF-2                                             >>>>>>>>>AtERF-3                                             >>>>>>>>>AtERF-4                                             >>>>>>>>>AtERF-5                          ------->GAMYB                                             >>>>>>>>>AtERF-1                         <---------MYB52(2)                                            --------->MYB46(3)                        --------->MYB46(3)                                 <---------WRKY12                                   --------->MYB52(1)                               <-----------HVH21                                 --------->ANAC58                              ------->GAMYB --------->RAP2.3(1)                  --------->ANAC58       ------>NtERF2         <------------AtMYB77       --------->At4g35610    --------->MYB52(1)      --------->DEAR3(1)     --------->MYB46(3)<------NtERF2                --------->ANAC58     --------->RAP2.3(1) <------NtERF2      --------->ERF1 <------NtERF2  --------->ZAT6        <----    ------>NtERF2       --------->ANAC46    --------->ATERF1(1)        ----------->HVH21       <-----    <---------ATERF1(1) ------>NtERF2      <---------At4g35610       <---------At4g35610       <-----    --------->LBD16     --------->LBD16    --------->At4g35610       --------->At4g35610  <---------MYB46(3)   --------->ANAC46    --------->ANAC46    <---------ATERF1(1)       ----------->RAV1(2) ------->TEIL   --------->DEAR3(1)  --------->LBD16    <---------ARR14(2)  <---------YAB1--------->ANAC58   <-----  <---------LBD16     <---------LBD16------->GAMYB--------->ICU4<---------GLK1(2)--------->ANAC46 ------->At4g35610   --------->MYB52(1)   --------->ARR14(2)  --------->ICU4--------->ANAC46  <------   catctccgccgcttgccataaactcccggcaaccgtcaacagcgtagccgccaatattagcggcatgattcttctgacactcaacgtaacggacgttgct  6496300                                                                                         --------->TOE1(3)                                                                                         --------->TOE2(3)                                                                                       *TSS                                                                                    ---------->DOF2                                                                                  --------->LBD16                                                                                 --------->LBD16                                                                                --------->HSFB2a(2)                                                                                <---------HSFB2a(2)  >>>>>>>>>TBF1                                                                <---------LBD16      - -----------AGL15      <---------DAG2<-----------GT1                         ------>ZmHOX2a(2)     <- ----ANAC58            <----------DOF2                                      <---------GLK1(1)      -- ----ANAC46         <---------ARR11(3)    <---------ALFIN1                  --------->GLK1(1)      <- ----ANAC58         --------->ARR11(3) <-----------GT1                     <---------ARR11(3)      -- ---MYB46(3)  <---------ZAT6<-----------GT1                                --------->ARR11(3)--------   tgaagaagaagtcatagtgtaagagctttttctctgttttatcaccacttgcctcttcttcatcttcttcgtaaactgatctcccgaaaaaccctaaaag  6496400    <---------YAB1 -------->KAN4(2)                                                          --------->AHL20(2) --------HSFB2a(1)                                                        <---------ATHB12 ------->HSFC1(2)                                                 <---------ANAC58 --------HSFC1(2)           --------->ICU4            ----------->GT1 ------------>CBF ------->HSFB2a(1)  <---------ANAC46     <----------DOF2          <---------ANAC58                  < -->DOF2          <---------ANAC46    <-----------------AGL3 <---------------AtSPL8  <----------DOF2-   aaaattccgattaccttgttttgtggggaaatgatcaaacactctttttggatactaagtaaaatggtacttgccaatgaaatgcccctttgtagccctt  6496500                                                                              <---------AHL20(2)                    <---------ZAT6                                           --------->AHL20(2)                  <---------ANAC58                                          <---------YAB1              <-------GAMYB                                               --------->YAB1             --------->MYB111(2)      --------->ZAT14                     <---------ICU4             <---------MYB46(3) --------->ARR11(3)  <---------GLK1(1)    --------->AHL20(2)             --------->MYB55(2) <---------ARR11(3)  --------->GLK1(1)    <---------AHL20(2)            <--------P         <---------CCA1(2)   <---------ARR14(2)    --------->ICU4           <-------GAMYB >>>>>>>>>WRKY6            --------->ARR14(2)    <---------ATHB51   --------->AHL20(2)  --------->WRKY38(1) --------->ZAT14            <---------AHL20(2)   <---------AHL20(2)  --------->WRKY45--------->ZAT6             ----------->GT1 ---------AHL20(1)<---------ANAC58    <---------ZAT14  --------->At4g35610-------->ATHB1          --- -------->AHL20(1)<---------ANAC46--------->ZAT6   <---------GLK1(2)  --------->AHL20(2)         ----   aatatataaatagggttgttgagtgttgactatatatctctacactatagacggatttgctgaagcatttgttaaattattatatgactaagtatttgaa  6496600                                                <------MYB83                                                <------MYB46(1)                                         --------------->AGL15                                         <---------------AGL15                                        ----------------->AGL3                                        ----------------->AGL2                                        <-----------------AGL2                                        <-----------------AGL3                         ----------->GT1                                        <-----------------AG                 ----------->GT1                                      --------->ARR11(3)                     <------MYB83                                      <---------ARR11(3)                     <------MYB46(1)                                     <---------CCA1(2)                      --------->MYB59                                    <---------AHL20(1)                      <---------TOE2(3)                                    --------->AHL20(1)                    --------->ICU4                                    <---------ARR11(3)               ----------->GT1  ----------->GT1      --------->At4g35610      --------->AHL20(2)                    <---------ANAC55(2)            < ------>DAG2          --------->ICU4--------->ARR11(3)  ---------->DOF2--------->AHL20(2)        <--- ------>DOF2---------->DOF2   ----------->GT1  --------->MYB59       --------->ANAC55(2)        -----   aaagtcgcatcagaaaaagaagtcattgtgaaatgaaatatatctatatttggtaagacaaagacttcgacatgtaattaggtttataagggtaaaaata  6496700    ----------->HVH21  ----------->GT1  <---------ANAC46  --------->ANAC58  <---------ANAC55(1)  --------->ANAC58  <---------ANAC58  --------->bZIP60(1)  <---------bZIP60(1)  --------->ANAC46  --------->ANAC55(1)  <---------ANAC58            <---------ANAC46  <---------TGA2(1)           <---------REM1(1)                ------>ZmHOX2a(2)  --------->ANAC55(2)      <---------ATHB12                    <---------ICU4  <---------ANAC55(2)  --------->MYB46(3)                    <---------ARR11(3)  --------->TGA2(1)    <---------MYB52(2)             --------->STY1(2) <-----------------------TaNAC69(2)                   <---------STY1(2)            <-----------GT1 -----------GT1      ----------->RAV1(1)          <---------STY1(2)         <---------AHL20(1)  ----- ------------AtSPL8 <----------ID1                --------->STY1(2)      ----------->GT1     <------- ---->AHL20(1)     --------->ZAT18       <---------TOE2(3)   --------->ARR11(3)  <---------AHL20(2)   tgttacgtaacatggaagaagtgcaacaaatgatgtagaatataagattactagctagctagtgatcttgacatctagtatatttaaaccattttctttg  6496800                                                    <----------DOF2                                                  ------>MYB46(1)                                                  ------>MYB83                                                ------->GAMYB                                               <------------MYB.PH3(1)                                               --------->MYB46(3)                   <---------YAB1              --------->DEAR3(2)                  --------->AHL20(1)         <-----------GT1        <-----------GT1                  <---------AHL20(1)        <-----------GT1       --------->CCA1(2)                <---------AHL20(1)    <---------RVE1(1)          --------->ARR11(3)                <---------AHL20(2)    <---------CCA1(1)          <---------ARR11(3)      <---------AHL20(2)               --------->YAB1        --------->ARR11(3)     --------->YAB1          <---------ARR11(3) ---->YAB1  --------->YAB1           <---------ARR11(3)    <---------AHL20(2)       --------->AHL20(1) ---DOF2  ----------->GT1            <---------ARR14(2)--------->AHL20(2)   <-----------GT1         -   atagttagaatcgagtataatatttttgaaaatgttgaagatatttttaaccgacttttaaataatagatatactatttatctgtatatattatatgaac  6496900  Previous    Next  AGI:  At1g18835.1    Description:  MIF3 (MINI ZINC FINGER). similar to MIF1 (MINI ZINC FINGER 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G74660.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64551.1); contains InterPro domain ZF-HD homeobox protein Cys/His-rich dimerisation region (InterPro:IPR006456) Range:  from: 6496089    to: 6496387    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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