Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           <-------MYC3                                                                                         ------->MYC2                                                                                         <-------MYC2                                                                                 <-----------GT1    -                                    ------>MYB46(1)                           XXXXXXXXXXXXXXXXXXXX>MIR2112-3P                                    ------>MYB83                      <---------At4g35610------->MYC3                                   --------->WOX13(1)     --------->MYB52(1)<----------DOF2 <--------                                -------->P                ------>NtERF2    <---------ANAC58--------->ZAT18              <------ZmHOX2a(1)<-----------GT1           --------->DEAR3(1)<---------ANAC58<-------TEIL         -------->P          <---------ANAC58         --------->ANAC58--------->At4g35610------->MYC4 --------->DOF2          <----------DOF2              --------->ANAC58--------->ZAT2   ------->MYC3 - ---ID1 --------->WOX13(1)   <---------ANAC58         --------->ANAC46<---------ZAT2   <-------MYC3 -   gagaaagaatcaaccaggaccgagtccctttacttaccaatctctctcttcaatacacgccaacgaagacttagctggctttttatccacatgtgcattg  6463600                                           --------->MYB46(3)                                          --------->ANAC58                                          --------->ANAC58                                     --------->ALFIN1                                    ------->MYC2                                    <-------MYC2                                    <-------MYC4                                    <-------PIF5                                    ------->MYC4                                    ------->MYC3                                    ------->PIF5                                    <-------MYC3                                   --------->PIF3(3)                                   <---------TGA1a                                   <---------PIF3(3)                                ----------->HVH21                                   --------->TGA1a                                 <-----------HVH21                                   <---------O2                                    --------->LBD16                                   --------->ANAC46                               --------->bZIP60(2)                   <---------ZAT2  >>>>>>>>>>HY5                                  --------->TGA1a              ----------->HVH21    --------->O2                                   <---------O2      - <---------WRKY18(1)           <-----------------PIF3(1)                          --------->O2------- -------->WRKY45   --------->At4g35610   ------>NtERF2                            <---------TGA1a   = -AtLEC2     <-----------HVH21<-----------GT1                                    <---------LBD16    = -------->WRKY12   --------->ZAT2<---------ALFIN1                            --------->DEAR3(1)    -- -------->WRKY38(1)<---------At4g35610  <---------PCF2                    --------->AtMYB61<---------ATHB12   cattgaccaagtctctgtcacagctcccattttctccacgtggcacccattaatgtctcattctcgacttcatataccacagccccgtgaccaatgaatt  6463700                                           <---------AHL20(1)                                           <---------AHL20(2)                                    ===============================bZIP_DOF                                    <----------DOF2                                  ------->TEIL                         --------->ZAT14                           --------->CCA1(2)                           <---------ZAT14                           <------ZmHOX2a(2)                        <---------ANAC58                          <---------AGP1   --------->AHL20(2)       <---------ANAC58                          --------->ARR11(3)                  <---------ZAT14                          --------->AGP1   --------->AHL20(1) --------->ZAT18                          <---------ARR14(2)             <---------ANAC58         ----------->GT1                          --------->ARR14(2)             <---------O2  --------->REM1(2)             <---------AHL20(2) <---------ZAT18          <---------TGA1a        <---------ANAC46             --------->AHL20(2) <---------ZAT14          --------->O2  --------->ZAT18 <-------------          --------->ARR11(3)    --------->ZAT14          --------->ANAC55(2)<---------ZAT14         - ----->ZmHOX2a(1)         <---------ARR11(3)             ============================================bZIP_DOF >TEIL    <---------ARR11(3)------>ZmHOX2a(2)            <---------ANAC58   <---------SPL7    ------- =================================HOX2a_HOX2a     --------->ZAT6    <---------ANAC46 ---------------- ==================================HOX2a_HOX2a <-----------GT1--------->ZAT14 ------->TEIL---------->DOF2 ------->TOE2(3)<---------YAB1--------------->AtSPL8     --------->TGA1a    --------->ZAT14--------->DAG2   tcctcaaactgagattttattacagacagatctgtgtacttttattttattaccactagacgtgtccactgcgtgtactgtaccgagtaacaaaaagaga  6463800                                                             <----------DOF2                                                         <----------DOF2    ---------->DOF2                                  <---------ALFIN1 --------->AHL20(2)                              <-----------HVH21           <------ZmHOX2a(1) --AGL15           --------->ANAC58              <-----------TGA1          <---------TOE1(3) -------->AHL20(2) --------->ANAC58             <---------ANAC58     <---------AHL20(2) ---->GT1   --------->YAB1        --------->YAB1<---------ANAC58 <---------AHL20(2) -------->ANAC81   --------->ANAC46     <----------DOF2 <---------DAG2     <---------TOE2(3)  -------   aaataaaaaaggaatgagaacacacaacaaatcaaattatagcttttatttcgtcacacctttctttttatttagttaaggaaaatgagaaaattatcca  6463900                                   --------->WRKY18(1)                                  --------->At5g28300                                  <--------ZAP1                                              --------                                 ----------->GT1                                             <-------                            --------->CCA1(2)                                             --------->YAB1                           --------->ARR14(2)                                             <---------ICU4                        <---------AHL20(2)                                             --------->YAB1                        --------->AHL20(2)                                             <---------ICU4                    <---------RVE1(1)                                                 <---------ATHB12                   <---------ARR11(3)                                                *TSS<---------YAB1                   <---------ARR14(2)             ----------->TBP                   --------->WOX13(1)                   --------->ARR14(2)           <---------DAG2                  --------->YAB1                   --------->ARR11(3)   <---------GLK1(2)                    <----------DOF2<-------- ----->CBF  ---------->DOF2<---------ARR14(2)   <----------DOF2     <<<<<<<<<TBF1 ------------>CBF   atattgaatgtttctaaagcagatattaaaatacgcggtcaaaattctcgctttataaacacatctcttcttcttctagctttcatcaatcatcatcatc  6464000                                                                                           <---------ALFIN1                                                                                        <-----------GT1                         ---------->DOF2                                               <-----------GT1                 ----------->GT1                         <---------HSFB2a(1)     <---------WOX13(1) ->YAB1        ---------->DOF2                           --------->HSFB2a(1)  <---------YAB1        < --ICU4     ----------->RAV1(1)      <----------DOF2    <---------KAN4(2)  <---------ARR11(3)      -- -YAB1  ------------------------>ANAC81    <-----------GT1                 --------->GLK1(2)  <------   actctctctcaatccaacaaagaaaaaaaaagtcttcttctttttttacaagtctgagaattttctacagaaacaaaaatctgattgtttttcccacttt  6464100                         --------->ARR14(2)                         <---------GLK1(2)                         <---------ARR14(2)                      --------->ANAC55(2)                  <---------At4g35610             <-------GAMYB                  --------->ZAT2                 --------->MYB52(2)                  --------->At4g35610            <---------MYB46(3)                  <---------ZAT2              <------MYB46(1)                                      --                 --------->ANAC58    --------->ATHB12                                             ---                 ------>NtERF2     <---------ARR11(3)                                             ---                 --------->ANAC58  --------->ARR11(3)                                             <--           ================================HOX2a_HOX2a        <---------At5g28300        ------->GAMYB ---------At4g35610  <---------LBD16<------ZmHOX2a(2)         <---------LBD16--------->WRKY12 ------- ----->TEIL<------ZmHOX2a(1)      --------->YAB1 <---------DEAR3(1)          --------->WRKY38(1) <--- ----DOF2<---------TOE2(3)--------->GLK1(1)   <------MYB83   --------->MYB52(1)         --------->MYB46(3)   gcatctgttttgaggatgccagctacggattttcaaggatcatttggaaggtcgttgctaagtttacggcgagaccaagttgactcatcaacagtcgtct  6464200                        --------->MYB46(3)                       --------->ANAC58                       --------->AtLEC2                       --------->ANAC58        <-------TEIL           --------->ANAC46                   --------->ARR14(1)           --------->RAP2.6(2)               --------->ARR14(2)          --------->MYB46(3)                 <---------GLK1(2) ------->LBD16    --------->ANAC58           <---------ARR14(2) ------>ANAC46    --------->ANAC58         ----------->ARR10 ------>HSFB2a(2)------->PIF5       --------->ALFIN1 -------HSFB2a(2)<-------PIF5      <-------GAMYB                 --------->At4g35610 -->ATERF1(1) <---------ALFIN1    <---------MYB46(3)         --------->O2          ------>ZmHOX2a(2) ------LBD16------>NtERF2        <---------TOE2(3)    ---------->DOF2      <-------TEIL   ccggaagtagtagccaccacgagccaagcaccatggaggttgagctagattcgtttcaaagacaagtcgctgagaaattcatcgatctcaacgcttcttc  6464300                                                                                                   --                                                                                                  <--                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                <----                                                                                            ------>ZmHOX2a(2)                              --------->HSFC1(2)                                        --------->DEAR3(1)                              <---------HSFC1(2)                                      --------->MYB52(1)                           ---------->DOF2                                           <---------ALFIN1                        ==============================HOX2a_HOX2a                    ------->GAMYB---                        ------>ZmHOX2a(2)         <-------GAMYB                      --------->AtMYB61                      --------->ARR14(2)         <-----------RAV1(1)       --------->YAB1  <------ZmHOX2a(2)                      <---------ARR14(2)       ------>ZmHOX2a(1)   <---------ANAC58 <---------MYB55(2)              --------->HSFB2a(2)     <---------GLK1(2)            <---------ANAC58 --------->MYB46(3)   aaacgaccttctctctctcgaatggatcggaaagcttcttgattctttcctctgttgtcaagaagagtttcgagctatcgtattcaaccaccgatctcag  6464400     <---------ARR11(3) ---->ZmHOX2a(2)                                                                                    < ----ZmHOX2a(2)                                                                  ------>NtERF2      - ------ARR14(2)                                                                 ----------->HVH21 <-- ------AGP1                                                                <---------SPL7         --- ----->AGP1                                                            --------->ANAC58          <--- ----->ARR14(2)                          --------->SPL7                --------->ANAC58         <---- ----->ARR11(3)               <---------At4g35610         <---------HSFB2a(2)  --------->LBD16  ----- ------ARR11(3)          <---------GLK1(1)                --------->HSFB2a(2) --------->ANAC46  ----- -----CCA1(2)       <---------MYB52(1) <---------SPL7  --------->ARR11(3) --------->DEAR3(1)    <---- ------>GLK1(1) ------->TEIL  --------->At4g35610  ---------->DOF2     --------->ANAC46       -------   atctctaaatctccgatggaccgtttgatttcagattacttcgaacggagcatcaaagctctagatgtctgtaacgccatccgcgacggtatcgaacaga  6464500  Previous    Next  AGI:  At1g18740.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G74450.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43630.1); contains InterPro domain Protein of unknown function DUF793 (InterPro:IPR008511) Range:  from: 6463985    to: 6466445    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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