Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    --------->AHL20(1)                                                                  <---------AHL20(1)                                                                 --------->AHL20(2)          --------->ICU4                                       --------->AHL20(2)     --------->YAB1                                      <-------TEIL<---------AHL20(2)    ----------->GT1                                   <---------ANAC58 -------->AHL20(1)               <---------AHL20(2)   --------->ANAC55(2) ---------AHL20(1)               --------->AHL20(2)   <---------ANAC58 -------->ARR11(3)      --------->AHL20(2)            <---------ANAC46--------->YAB1 ------>AHL20(1)        <---------AHL20(2)            <---------ANAC55(1) -------AHL20(1)      <---------YAB1                  <---------ANAC55(2)<-----------GT1 --->AHL20(2)      <---------AHL20(2)                --------------->AtSPL8 -->AHL20(2)       <---------AHL20(1)                <---------------AtSPL8 ---AHL20(2)       --------->AHL20(2)                --------------->AtSPL3      <-----------GT1 ->AHL20(2)        --------->AHL20(1)--------->YAB1  <-----------------------TaNAC69(2)      --------   tatatattgataaatatgaaatttattaaaacaaatttatcaaaaatttcatggttacgtacaaaaaatatataatcaccaattcaccattttgtttata  6450200                                                                   --------->DAG2                                                         <---------ICU4                                         --------->AHL20(2)    --------->ANAC46                            ----------->GT1              <---------AHL20(2)                            <---------ANAC55(2)          <--------ATHB1                        ------                            <------MYB83 <---------AHL20(2)  <-----------GT1             <---------ZAT18                           --------->MYB59               --------->AHL20(2)              --------->ZAT18               <---------YAB1         --------->AHL20(2) --------->ATHB51                <---------ZAT14           --------->ARR11(3)        --------->AHL20(2) <---------ATHB51             --------------->AtSPL8    <---------YAB1     <---------YAB1<---------AHL20(2) --------->ICU4        <---------ZAT6   ------ ->AHL20(2)<---------GLK1(2)<------MYB46(1)        ----------->GT1---------->DOF2    <---------------AtSPL8   tatgttcttattagattttgatattttgataggtaaaaaataaataaatactggggtaataatttacgaaaagtttttaagtgttagatagtacaccttc  6450300              <---------ANAC46                           --------->DAG2       --------->AHL20(1)                               ---------->DOF2       <---------AHL20(2)                     --------->ANAC46                         <----------DOF2      --------->AHL20(2)                      <---------ANAC55(2)              <----------DOF2 --------->AHL20(2) <---------TOE1(3)         --------->ANAC58                <---------------------- <---------AHL20(2) <---------TOE2(3)         --------->ANAC58               <----------------------- >MYB83--------->AHL20(2)                     --------->ANAC55(2)         <----------DOF2       <---- >MYB46(1)   ---------->ID1                  <---------------------WRI1--------->ARR11(3) <----------   catttaaaattaattgtcgtttaaagttttttcacgagtataactaatacgaaacaaaaaaagtaatagatactatcttttcttttcttcttttacctct  6450400                                   ----------->GT1                              <------MYB46(1)                              <------MYB83                             --------->MYB59                          --------->ARR14(2)                   --------->CCA1(2)                                                           ------                  --------->ARR11(1)                                                         <------ZmHOX2a(1)                  --------->ARR14(2)                                                    ------->GAMYB  --------->ANAC46<---------ARR11(3)                                                  --------->RAP2.6(3) --ANAC81         --------->ARR11(3)         --------------->AGL15                   --------->MYB52(1) -ANAC81          <---------ARR14(2)         ======================================================== ------DOF2     ----------->ARR10  --------->YAB1                                <---------ARR11(3) -GT1--------->AHL20(2)   <---------ARR14(2) <---------------AGL15               --------->ARR11(3)   ttacacataaattttggcaagatttgggtatttggtatggtaatagactaatagtagaaatttgtgctcgataaaactttcgatatctaacggcaggaat  6450500                            --------->YAB1                            -------->HAHB4                            <---------ICU4                         --------->YAB1                        <---------YAB1                        <---------AHL20(2)                       --------->AHL20(2)                       <---------AHL20(1)            --------->AHL20(2)        --------->ANAC58                       --------->AHL20(1)            <---------AHL20(2)        --------->ANAC58                      --------->YAB1         <---------DEAR3(1)  --------------->AGL15                  <------NtERF2             --------->ATERF1(1)  <---------------AGL15                 --------->LBD16           --------->ALFIN1      --------->TOE2(3)               <---------LBD16            --------->ALFIN1       --------->TOE1(3)------->TEIL              ------->GAMYB<---------YAB1--------->ALFIN1       ----------------->AGL2           --------->MYB52(1)   ----------------->AGL1 <------------CBF   --------->YAB1 ----------->GT1<---------ANAC46----------------->AG <---------YAB1    --------->YAB1 *TSS --->GLK1(1) --------->MYB46(3) =================================================MADS_MADS  <-------- =================================================MADS_MADS   <-----------GT1--------->MYB52(1)   tcgaagtaaaatccaacggcggaaatataataataccaaaacaggggggggctatataattgtataaccctaattagaataacgcatcccactactcatt  6450600                                                                                 <---------ICU4                                                                                 -------->HAHB4                                                                                 --------->ATHB51                                                                                 --------->ATHB12                                                                                 <--------ATHB1                                                                                <---------ATHB51                                                                                <---------AHL20(2)                           --------->REM1(2)                                    --------->AHL20(2)                          --------->ALFIN1          --------->HSFB2a(2)      --------->AHL20(2)                         ------->MYC3               <---------HSFB2a(2)     --------->AHL20(2)                         <-------MYC3              <---------LBD16          <---------AHL20(2)                 ----------->GT1           <----------DOF2           <----------DOF2 -ATHB12    ------>ZmHOX2a(1)              <---------DAG2         <---------ALFIN1        -----------   ctctcgagagcatcctacagagtaaaacgtgtagagagagactcacttttttttctggagagagagacacactttcaaataaataattgaacttgtttaa  6450700                         ------->MYC3                         ----------->GT1                         <-------MYC3                      <---------ANAC46                        --------->TGA1a                   <---------MYB46(3)                        <---------TGA1a                   --------->MYB55(2)                        <---------O2                      <------MYB46(1)                        --------->O2                   <---------ANAC58                        =======================================MYC_MYB                        =========================================MYC_MYB                 ----------->GT1                       <-------GAMYB                             <---                <---------AtMYB61                      <---------ANAC58                          <---                --------->ALFIN1                      <---------MYB46(3)                       <-----                <---------DEAR3(1)                    <------MYB83                           <-------              <---------bZIP60(2)                     <------MYB46(1)                       <--------              <---------ANAC46                       --------->MYB59           --------->ANAC58<-----             <---------AtMYB61           <------MYB46(1)<--------P             --------->ANAC58------   ---------->ID1<---------MYB46(3)      <------MYB83<---------AtMYB61        --------->SPL7--------- >GT1     <-----------HVH21            <---------WOX13(1) <------MYB83       <------ZmHOX2a(1) ------   aatttgtcttctcgtgaggtggtgaaacgtggcaatattagattggttttttagtttggttggctggagaaaatggggaggacgacatggttcgacgtcg  6450800                             <------ZmHOX2a(1)                          <------NtERF2                          --------->At4g35610                     --------->ANAC58                     --------->ANAC58                     --------->ANAC46                     <---------DEAR3(1)                                          <---------SPL7 ------------------WRI1   <---------At4g35610                                   <---------ANAC58 ------LBD16         <---------ATERF1(2)             --------->TOE2(3)      <---------WOX13(1) ----ETT(2)         --------->RAP2.6(3)             --------->REM1(1)     --------->ATHB12 ----HVH21          --------->SPL7             ------>NtERF2         <-------GAMYB -O2                <---------ORA47(1)       <------NtERF2         <---------ANAC46 ----DEAR3(1)     --------->ZAT18          <---------DEAR3(1)      <---------ANAC58 --->DEAR3(1)     <---------ZAT14          ---------->CDC5         <---------ANAC58          -------- >O2    ---------->DOF2<------NtERF2    --------->ZAT2        <---------AtLEC2  <---------ANAC58 --->ETT(2)      --------->ALFIN1     <---------GLK1(2)    ------->GAMYB <---------YAB1   --------->LBD16   acgggatgaagaaaggagagtggacggcagaggaagaccagaagctcggcgcttacatcaacgagcatggcgtttgtgattggcgttccctccccaaaag  6450900                                <-------TEIL                                --------->ZAT18                           ---------->DOF2                       --------->YAB1                                                     --------->ANAC55(2)                    --------->WOX13(1)        <---------ZAT18                             <---------ANAC55(2) ----------->GT1 <-----------HVH21            <---------At4g35610                       --------->CCA1(2) -->DOF2      <---------ICU4    <---------ZAT18        <---------AHL20(2)   <----------DOF2  ------->TEIL   agctggtataatataaacatgtcattcataaaagtgcattttagtttgtgctcatatgaaattgtgtcttcttctactctttttcattagatatgtattt  6451000                                                   --------->CCA1(2)                                                  <---------ARR14(2)                          <------                                                  --------->ARR14(2)                          -------                                       ------>NtERF2                                    <---------AHL20(2)                                     <---------ANAC58                                   --------->AHL20(2)                                     <---------ANAC58  <---------ANAC46             <---------CCA1(1)                         --------->AHL20(2)   --------->YAB1                        <---------RVE1(1)                     ----------->GT1<---------At4g35610<---------ANAC58            --------->ARR11(3)          <---------MYB46(3)        --------->At4g35610<---------ANAC58            <---------ARR11(3)   ggaacaagggatttgttgaagtctagataaattctagttgctgccctatgaaaatatgcgtgtatatatgtagcaaaacacttgggatatttatatttat  6451100  Previous    Next  AGI:  At1g18710.1    Description:  AtMYB47 (myb domain protein 47); DNA binding / transcription factor. similar to MYB95 (myb domain protein 95), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G74430.1); similar to MYB1 [Dendrobium sp. XMW-2002-1] (GB:AAO49410.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15011.1); similar to transcription factor DcMYB2 [Daucus carota] (GB:BAF49441.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:I Range:  from: 6450586    to: 6453106    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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