Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   <-----------GT1                                                              --------->YAB1                                                          ------>ZmHOX2a(1)            --------->At4g35610                          <---------MYB59            <---------At4g35610                         ------>ZmHOX2a(2)           --------->ANAC46                            <------ZmHOX2a(2)          <---------LBD16                             --------->ARR11(3) ---------->HVH21                                     --------->ARR14(3) ------>At4g35610                                     <---------ARR14(3) ----->ARR14(2)                                       <---------ARR11(3)                   <--------- ------ARR14(2)                                       <---------ARR14(2)      <---------MYB59 ----->GLK1(2)                       --------->ANAC46 --------->ARR14(2)      --------->TOE1(3) -----GLK1(2)            <---------ALFIN1       --------->ARR11(3)            --------->TOE2(3)     <   atctgacaattctccgctatcgactctccacctatatacacagaaacaaatatcaagatcctaattttaactactcaaaacctaaattcaaaatgtcaca  6433100           --------->YAB1                           --------->YAB1       <---------ICU4          <---------ZAT6                           <---------YAB1        --------->ATHB12 --HVH21----------->GT1                 <------ZmHOX2a(1)               --------->MYB46(3)     <----- ---------LBD16----------->GT1        <---------TOE2(3)   --------->ANAC46                     ------   tttggggaagcagtgataagaaaaatcaaacctttggaataaggaacaatgtgatcatactcgaaacagagacaaccattgcaatttccgaagcgtttgc  6433200                       --------->ANAC58                       --------->ANAC46                   <----------DOF2               ===============bZIP_DOF               --------->O2               --------->TGA1a               <---------O2               --------->bZIP60(2)               <---------TGA1a               <---------ANAC46             ------>NtERF2             <---------ATERF1(1)            --------->DEAR3(1)            <---------DEAR3(1)            ----------->HVH21           --------->RAP2.3(1)          ----------------------->TaNAC69(2)          --------->ANAC46          --------->LBD16         --------->ATERF1(2)                          --------->bZIP60(1)         <---------ATERF1(2) --------->AtMYB61     <---------TOE1(1)        <---------LBD16--------->ANAC58            <---------TOE2(1)        --------->DEAR3(2)  --------->O2 --------->ETT(2)  --------->ICU4       --------->MYB52(1) <---------ALFIN1        --------->SPL7       <---------At5g28300--------->DEAR3(1) <-----------RAV1(2)      <-----------GT1<-----------GT1     <---------ETT(2)  --------->At4g35610        <----------DOF2 ----At4g35610<------NtERF2------>NtERF2--------->DDF1<---------bZIP60(1)            <---------DAG2 --->At4g35610--------->ATERF1(1)<---------LBD16  <-------TEIL         <---------ALFIN1            --   agactatgttaccggcgacgtctttacgccacctctcgggatgtcgaccaggtacgatgtcagcattagcccagcacttgttcttcgcctttccatcgaa  6433300                                                                                      --------->ALFIN1                                                                                    --------->MYB55(2)                                                                                    <---------MYB46(3)                                                                                   --------->ALFIN1                                                                                   <---------DEAR3(1)                                                                                   <---------AtMYB61                                                                                  <-------GAMYB                                                                                  <------NtERF2                                                                                 <---------MYB46(3)                                                                                <---------DEAR3(1)                                                                                --------->ALFIN1                                                                                <---------AtMYB61                                                                                <---------DREB2C(2)                                                                                <---------ANAC46                                                                               --------->ATERF1(1)                                                                               <---------ABI4(1)                                                                               <------NtERF2                                                                              <---------RAP2.6(1)                                                                              <---------RAP2.3(1)                                                                              <---------RRTF1(1)                                                                              ------>NtERF2                                                                              <---------ATERF1(1)                                                                              <---------DEAR4(2)                                                                              <---------ERF1                                                                             <---------RRTF1(3)                                                                             <---------RAP2.6(2)                                                                             <---------RRTF1(2)                                                                             <---------ATERF1(2)                                                                             --------->DEAR3(1)                                                                             --------->ATERF1(2)                                                                             <---------RAP2.3(2)                                                                             <---------RAP2.3(3)                                                                             <---------ANAC46                                                                             <---------DEAR3(1)                                                                             --------->ALFIN1                                                                            <---------At4g35610                                                                            --------->DEAR4(2)                                                                            <---------ABI4(1)                                                                            --------->RAP2.3(1)                                                                            <------NtERF2                                                                            --------->DREB2C(1)                                                                            --------->ATERF1(1)                                                                           <---------DEAR4(2)                                                                           <---------RAP2.6(1)                                                                           <---------RRTF1(1)                                                                           <---------ERF1                                                                           <---------RAP2.3(1)                                                                           ------>NtERF2                                                                          <---------RAP2.6(2)                                                                          <---------DREB2C(2)                                             <---------DEAR3(1)           <---------DEAR3(1)                                            <------NtERF2  <------NtERF2  <---------RRTF1(3)                                           ------>NtERF2 --------->ETT(2) <---------RRTF1(2)                                           <---------RAP2.3(1)            <---------RAP2.3(3)                                          <---------RAP2.3(3)        <---------ARR14(2)                                          --------->ATERF1(2)        --------->ARR14(2)                                          <---------DEAR3(1)        <------ZmHOX2a(1) <---------ANAC46                                        --------->MYB52(1) --------->ATERF1(1)<---------ORA47(2)                                       ----------->TGA1  ----------->HVH21--------->DEAR3(1)                                       ----------->HVH21 <---------DEAR3(1)<---------ATERF1(1)                                     --------->ANAC55(2)--------->ATERF1(1)<---------ORA47(2)                           <-----------GT1<---------ANAC46------>NtERF2   <---------ATERF1(2)                           <<<<<<<<<<<<<<<<<LFY        <---------ATERF1(1)<---------RAP2.3(2)                       --------->ARR11(3) <---------RAP2.6(2)    <------ZmHOX2a(1)<---------ABI4(1)                   <---------MYB52(1)--------->TGA1a  <---------DEAR3(1) <---------ABI4(1)                  =============================MYC_MYB--------->ALFIN1 <---------DEAR3(1)     <---------ARR11(3)<---------ARR11(3)--------->RAP2.6(3)<---------ANAC46--------->At4g35610 ------->CCA1(2)  <-------GAMYB      <---------ANAC55(2)<------NtERF2--------->MYB52(1)         -----   gaaacgaggtctctcttctccgttagattttacattggaacgtgacggcgatgaaggtggcgacggaggaggaacggcggcggcggtggtggagttagta  6433400         ---------->DOF2      <------NtERF2                         --------->HSFB2a(2)               --------->AHL20(2)     --------->LBD16                        <---------HSFB2a(2)               <---------AHL20(2)    <---------ANAC46                ------>ZmHOX2a(1)                  <------MYB46(1)    <---------DEAR3(1)          ------>NtERF2                          <------MYB83   --------->ATERF1(1)          <---------SPL7                         ----------->GT1     --------->ANAC58   <------NtERF2                <---------RAP2.6(3)                  <--------P<---------AHL20(2) --------->ALFIN1              <---------ANAC58                   --------->LBD16          --------->ANAC58 <---------DEAR3(1)            <---------ANAC58<---------GLK1(2) <---------LBD16    --------->MYB59 ----->DOF2                   --------------->AtSPL3    *TSS    <---------LBD16--------->AHL20(2)   aaggaggcggagaaagatgaccccatcgcattgccgtcctctctctctagaattttgggtttttgaaccgggaaggtaaattaaattcggttcaagtaaa  6433500                 <---------ICU4                --------->ICU4                                    *TSS           ----------->GT1                                     <---------DAG2----------->HVH21          --------->LBD16                                      <----------DOF2      --------->MYB52(1)                                     --------------->AGL15      ------>MYB83    <---------ANAC58                       <---------------AGL15                  -      --------->ARR14(2)       --------->AHL20(2)           ----------------->AGL2        <---------ARR11(3)      <---------ARR14(2)       <---------AHL20(2)           <-----------------AGL2        --------->ARR11(3)      ------>MYB46(1) <---------ANAC58   --------->LBD16    <-----------------AG ------>NtERF2  <----    <---------MYB59  ---------->ID1    <---------LBD16      <-----------------AGL1        --------->GLK1(2)   ----------------->AGL1  ----------->GT1 <---------GLK1(2)<-----------------AGL3----------->RAV1(2)   catagaccgaaccgggtaattttggcttcttgttaaattagaccggaattttgcattttccttctctttttggcaactcttgacgcctgaaaaatctttt  6433600                              <---------HSFB2a(1)                              --------->HSFC1(2)                              <---------HSFC1(2)                            <---------GLK1(2)                              --------->LBD16                          --------->ANAC58                      <-----------GT1                          --------->ANAC58                     --------->ARR14(2)                     <---------------------WRI1                <---------ARR14(2)                     <------NtERF2                         --------->REM1(2)      ---------->ID1      <---------WOX13(1)---------->DOF2                  --------->LBD16  <---------ANAC46 ----->ZmHOX2a(2)  <---------DEAR3(1)            ----------->HVH21       <---------LBD16 -----YAB1        --------->SPL7    <---------MYB52(1)  <---------ANAC46<-----------RAV1(1)<-------GAMYB   gatcggagattgctaaatcagacggcgaaagaaactccgtcgtcttcgtccatgacctccgtgtatatactcttctgcgggtttgtcattttcggttgaa  6433700                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                               ------                                                                                           <---------ZAT6                                                --------->HSFB2a(2)                        <---------                                                <---------HSFB2a(2)                  <---------ARR14(2)                                    --------->ATHB12                                 --------->ARR14(2)                                   <---------YAB1                          <---------------AGL15<----                                  <---------TOE1(2)                        ------>ZmHOX2a(1) <------- <----------DOF2                  <---------TOE2(2)         --------->ANAC46    --------->ICU4 <-----   tttctttctgttttcatttgagtcttgtttcaatcgcatgattccaccttcgagtaacttatactccatagatagtcctgaaattagtatctactgttgg  6433800        <---------ANAC58    --------->ALFIN1    <---------ANAC58    <---------ANAC58 ---------ANAC58 ---------ANAC46 ---------ANAC58             --------->REM1(2) --MYB83<---------ANAC58  <---------ANAC58            --------->SPL7 -----ANAC46              <---------ANAC55(2)       <---------ZAT18 -----ANAC58              <---------ANAC46          --------->ZAT14 -----ANAC58              <---------ANAC58          <---------SPL7 --->MYB55(2)      <---------ANAC46                 <---------ZAT14 --RAV1(1)        --------->ALFIN1                --------->At4g35610 --MYB46(1)       <---------AtMYB61               --------------->AtSPL8 --MYB52(1)      <---------ZAT14                  <---------At4g35610 ----MYB46(3)   --------->ALFIN1                ---------->CDC5   <---------MYB52(1)<---------WOX13(1)   gtgagtgtgtgcgtctgtgtgtggtgtttcgtgaagagtcttggataaactcagcgtactctatttctgttagtataagtaggctaattgaattttagaa  6433900                              --------->ZAT14      <---------AtMYB61  <-------TEIL                                                          <<<<<<   <----------DOF2   <---------------AtSPL8                        ----------->HVH21    <---------YAB1   ctatactttaggtggtcttagttcaagtacattgcagacaaacttgaagaacgtttttcaaaatcgaccatgacatgaattcgttccatgatgcttcttc  6434000  Previous    Next  AGI:  At1g18680.1    Description:  HNH endonuclease domain-containing protein. similar to HNH endonuclease domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G47490.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64504.1); contains InterPro domain HNH nuclease (InterPro:IPR003615); contains InterPro domain HNH endonuclease; (InterPro:IPR002711) Range:  from: 6431930    to: 6433456    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g18690.1    Description:  transferase/ transferase, transferring glycosyl groups. Identical to Putative glycosyltransferase 4 (GT4) [Arabidopsis Thaliana] (GB:Q9M9U0); similar to galactosyl transferase GMA12/MNN10 family protein [Arabidopsis thaliana] (TAIR:AT1G74380.1); similar to galactosyl transferase GMA12/MNN10 family protein [Arabidopsis thaliana] (TAIR:AT5G07720.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64511.1); contains InterPro domain Galactosyl transferase; (InterPro:IPR008630) Range:  from: 6433566    to: 6436914    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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