Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                <----------DOF2                                                           ----------->GT1   <---------DAG2      ------>MYB83                         <---------ANAC55(2)              --------->HSFB2a(1)      ------>MYB46(1)                      --------->ANAC55(2)              <---------HSFB2a(1) >ANAC58 <---------ICU4           ---------->DOF2    ---------->DOF2 ---------->DOF2              <-- >ANAC58<---------ATHB12 ----------->RAV1(1)  --------->AHL20(2) <---------AHL20(2)          --------   acaaaaccaaatcattttcagagacaacaacatttcaaaagtattacataatatacaaagagagtatataaaaaaggaaccttttcgagtttttcgaaag  6430300                                                                    <---------At4g35610                    <---------ATHB12                                --------->At4g35610                    --------->MYB46(3)                              --------->ZAT2                   ------>MYB46(1)                               --------->MYB46(3)                   ------>MYB83                        --------->ANAC58                   -------->P                     --------->ANAC58  <---------ZAT2                  ------>MYB46(1)                 --------->ANAC58  ----------->RAV1(2)                  ------>MYB83            <---------O2 --------->AtLEC2                       <------                <---------MYB59           <---------TGA1a       ------>MYB83                  <------                --------->MYB46(3)        <---------bZIP60(2)   -------->P               ------------     ------>ZmHOX2a(2)                    ===============================MYC_MYB     <----------DOF2    <------ZmHOX2a(2)                     --------->O2 --------->ANAC58            <---------At4g35610   --------->ARR14(2)  <---------YAB1  ----------->HVH21        ------>MYB46(1)    --------->ZAT2   <---------ARR14(2)--------->YAB1    --------->DEAR3(1)  --------->ANAC58        <---------ZAT2 <---------DEAR3(2)=================================MYC_MYB--------->ANAC58   --------->ZAT2 <-------TEIL ---------HVH21--------->ANAC58      --------->ANAC46  --------->ANAC46 ----------->HVH21<---------TOE2(3) -->DOF2       --------->ANAC58  --------->REM1(1)--------->ANAC46------->GAMYB    --------->At4g35610   cgtcggatcgaaatggaacccaaccatgaatagcttcaccagcgacgttgctaagccacgcaggccaaccagctgcgacctgctcagcttcaaggtactt  6430400                          ------>MYB46(1)                        --------->DREB2C(2)                                           <---------MYB59                        --------->DEAR3(1)                                            --------->MYB46(3)                        --------->MYB46(3)                                   --------->ARR14(2)                       --------->DEAR3(2)                             ------->GAMYB  --------->ANAC58                <---------ARR14(2)                                   <---------MYB52(2)    ------->GAMYB                --------->ARR14(2)                                  <---------At4g35610 ------>MYB46(1)      <---------At5g28300 ------>MYB83                          --------->ANAC46     --------->ANAC58 ---ANAC58     <------NtERF2                                    --------->ANAC58     --------->ANAC46 ---ANAC58    --------->LBD16                                   --------->ANAC58    -------->P --->AtSPL8  <---------ANAC46      ------>ZmHOX2a(1)<---------ETT(2)--------->At4g35610 ------>MYB83   gctcaaattaccgaggcggaaactcaccgactcactcctacaattcgaactcgctcgaccagactcactcaactcaccgaaatcgctacccaactcacta  6430500                                                                          <---------ARR11(3)                                                                          --------->ARR14(2)                                                                          <---------ARR14(2)                                                                          <---------ARR14(3)                                                                          --------->ARR14(3)                                                                          <---------GLK1(2)                                                                          --------->ARR11(3)                                                                         <---------HSFB2a(1)                                                                         --------->HSFB2a(1)                                                                        ----------->ARR10                                                                  --------->LBD16  --------->YAB1                                                 --------->HSFC1(2)   =============HOX2a_HOX2a   <---                                                 <---------HSFC1(2)   <------ZmHOX2a(1)       -------                                              ---------->DOF2   --------->At4g35610--------->TOE2(3)                                          ----------->RAV1(1)   <---------At4g35610------->GAMYB ----                                         --------->ANAC58    ----------->HVH21------>ZmHOX2a(1)------                                         --------->ANAC46   <-----------HVH21--------->TOE2(3)<------       <-----------GT1                   --------->ANAC58   <-----------TGA1------>ZmHOX2a(2)<-------   <----------DOF2                     <---------ALFIN1    --------->ANAC46<------ZmHOX2a(2)--------- <----------DOF2                    <---------ALFIN1<-------TEIL<---------LBD16   --------->MYB46(3)   ccgctctttttactactactcttcttcccgctcttgctccaccacgacaaaagcttcgtctccgtcaccggaggaagatcctcaaccacaattctaccgg  6430600     --------->MYB46(3)                            --------->HSFB2a(2) ------ARR14(2)                                    <---------HSFB2a(2)                  <---------HSFB2a(2) -->HSFB2a(2)                                 <---------ANAC58                 --------->ANAC58 ----->ARR14(2)                               <---------ANAC58                 --------->ANAC58 --->LBD16                                   <------NtERF2                 --------->ANAC46<---------GLK1(2) ---HSFB2a(2)                               ------>NtERF2               ----------->HVH21--------->LBD16 --LBD16                                ------>ZmHOX2a(2)      <---------At4g35610      --------->HSFB2a(2) >MYB52(1)        --------->LBD16   ------>ZmHOX2a(2)          --------->At4g35610     <---------LBD16   aaccagaacaaacattgtccctgaaaacaccagagtgatcgatcgctggcgttacagaaacagtctgcttcgagttgacacaacccattcccagaatttc  6430700                                                           <---------YAB1                                                       <------------CBF                                                    <-------GAMYB                                                    <---------MYB52(1)                                                   <---------DEAR3(2)                                                   --------->LBD16                                                  <---------ANAC46                                                  <---------DEAR3(1)                                                 --------->DEAR4(2)                                                 <------NtERF2                                                 --------->ATERF1(1)                                                <---------ATERF1(1)                                                ------>NtERF2                                                <---------ERF1                    <---------YAB1                                                ------------>AtMYB77            --------->YAB1                           --------->LBD16      <---------RAP2.3(1)            --------->ICU4                          <---------HSFB2a(2)   <---------RAP2.6(1)      --------->LBD16                          --------->HSFB2a(2)   <---------RRTF1(1)     <---------LBD16             ----------->RAV1(1)               <---------DEAR3(1)    ------>ZmHOX2a(2)            --------->MYB46(3)                 --------->DEAR3(1)   --------->GLK1(1)       <-----------HVH21 <---------LBD16      --------->ATERF1(1)   <------ZmHOX2a(2)              <-      --------->ANAC46  --------->MYB52(1)    --------->ERF1        <---------GLK1(1)              <-     --------->LBD16    ------->TEIL          --------->RRTF1(1)   <-----------ARR10               <-     ------>NtERF2    --------->ZAT18         --------->RAP2.6(1)  --------->ARR14(2)              <-    <---------ALFIN1<-------MYC3              --------->RAP2.3(1)  <---------ARR14(2)          <-----   <---------LBD16------->MYC3               <---------ATERF1(1)   --------->ARR11(3)         <------  ------>ZmHOX2a(1) ------->MYC3             <---------DEAR4(2)    <---------ARR11(3)    <----------- <---------ALFIN1 <-------MYC3             --------->DEAR3(2)     <---------CCA1(2)  ------->TEIL <--   gctcctccgcgtcaacaacacatgtgtaccggaactatctcttaaaccggcgccggttattgtgattcggatctccggtgaatgatgaaactattgctgt  6430800                                                                                    --------->LBD16                                                                                   <---------ANAC55(2)            --------->ARR11(3)                                                     <---------ANAC58  <----------DOF2                                                                  <---------ANAC46 --------RAP2.6(2)                                                                 <---------ANAC58 --------ANAC58                                                                   <---------LBD16 --------ANAC58                                                            --------->LBD16 --------ANAC46                                                           <---------ANAC58 --GAMYB<---------MYB52(1)                                                <---------ANAC46 -----RAV1(1)                                                             <---------ANAC58--------->ANAC58 -CBF  --------->TOE2(3)   ---------->DOF2           <----------DOF2<---------GLK1(1)     --------->ANAC58 -------LBD16--------->CCA1(2)                <------------------------ANAC81  <------------CBF   tgcggttttcgttagatatatacagagagaaaagtttagagaatgttgtttttttcttttagagtttttgatttctgcgtgaattgcggaagacgaaatc  6430900                                                                             <---------RVE1(1)      -                                                                             <---------CCA1(1)      <                                                                            <---------ARR11(3)    <--                                                                            <---------GLK1(2)     ---                               <---------ANAC46                             --------->ARR11(3)   ----                               <---------ANAC58                           ----------->ARR10 ---------                    ---------->DOF2    --------->YAB1                --------->ANAC46      ----------                 <------ZmHOX2a(2)    ----------------->AGL3    <---------ARR11(3)     ------>ZmHOX2a(2)   --------->AHL20(2)          <---------ANAC58                --------->GLK1(1)       --------->ETT(2)   <---------AHL20(2)   --------->AHL20(2)         --------->ICU4   <---------LBD16  --------->ARR14(2)   aaaaattaaacagagatagatcaaaagtaaatgtcgtgtaatcaaaaatagaaatgtttaaggcgaaatctacggcaagattttttggatcgacagtgaa  6431000         --------->ATHB12      <---------ANAC58 -------->HAHB4 <---------ICU4 --------->YAB1 -------->ICU4 ---------YAB1 -------ICU4                                                  <----------DOF2 ------>YAB1                            <---------ANAC55(2)   --------------->AGL15 ----->ICU4               <-----------GT1             <----------DOF2                               < >At5g28300<---------WOX13(1)<----------DOF2          <---------DAG2                             <--- ->GT1<---------ANAC58 <----------DOF2  --------->ANAC55(2)<-----------GT1               <---------ZAT6   taatgatgacttgattgatcactctcttttactttctgtgttaagtatttctacagctttttttctttgtatagttcaatttgatatagtagtgtttttt  6431100                                                                                          <---------ZAT6                                                                                          --------->ALFIN1                                                                                    ------>NtERF2                                                 <---------AHL20(2)                --------->DEAR3(1)                                                 --------->AHL20(2)                ----------->HVH21          ----------->GT1                 <------ZmHOX2a(1)                       --------->ATERF1(1)      <---------ANAC55(2)                 ----------->GT1                         <------NtERF2    <-    <---------AHL20(2)              <---------AHL20(2)                            --------->RAP2.3(1) ---------YAB1                      --------->AHL20(2)                           <---------RAP2.3(1) --------GT1                       --------->AHL20(2)                         --------->MYB52(1)   --   ttctaattaagtgagtaacattgttgagaaaatcgaaattaataggattaaaaaattatgcaatggaacgagagtttgactagcggcgaccagtgtgaga  6431200  Previous    Next  AGI:  At1g18670.1    Description:  IBS1 (IMPAIRED IN BABA-INDUCED STERILITY 1); kinase. similar to ATP binding / protein kinase [Arabidopsis thaliana] (TAIR:AT1G74330.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64505.1); similar to hypothetical protein OsJ_024011 [Oryza sativa (japonica cultivar-group)] (GB:EAZ40528.1); similar to hypothetical protein OsI_025812 [Oryza sativa (indica cultivar-group)] (GB:EAZ04580.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Seri Range:  from: 6426890    to: 6430688    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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