Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          --------->ARR11(3)                                        <---------ARR11(3)                                       <---------CCA1(2)                               <---------AHL20(2)                               <---------AHL20(1)                               --------->AHL20(1)                               --------->AHL20(2)                            <---------YAB1                              --------->AHL20(2)                            <-----------GT1                              <---------AHL20(2)                            --------->ARR11(3)                          <---------AHL20(2)                                <---------ARR11(3)   <-----------GT1        --------->AHL20(2)                               --------->YAB1 -------GT1              --------->AHL20(2)   <---------YAB1           <---------YAB1        <------ZmHOX2a(1) ----GT1        --------->ATHB12     --------->AHL20(2)              --------->YAB1<---------YAB1 -AHL20(2)     --------->MYB46(3)   <---------AHL20(2)         <-----------GT1 <----------DOF2   acatttcactagtcgtaaccattggcatttaattttattttaaatcttatgcttcacatatttagtcacaattctaattatctttatgtttcttaggaca  6376400                                                           --------->YAB1                                                          --------->ICU4                                               ----------->GT1                                              --------->DAG2                                             --------->DAG2-------->ATHB1                                         --------------->AGL15                                         <---------------AGL15          <-----------GT1                                        <---------------AGL15   <---------YAB1                                    <----------DOF2      --------->GLK1(2)                   ------>MYB46(1)                            <---------YAB1  ---------->DOF2<--------HAHB4                    ------>MYB83                       --------->YAB1   ----------------->AG --------->ICU4                 ---------                      <---------ATHB12  ----------------->AGL1<---------ICU4              -----------                     --------->ANAC58  <-----------------AGL1<---------YAB1          --------------->AtSPL8              <-----------GT1    <-----------GT1    ---------->DOF2------->TEIL      --------------->AtSPL3   --------->ICU4    --------->ANAC58  <-----------------AG<---------ICU4     ------------>CBF   atgtcatgtttttgtttcaccacaatcaatatgattttctttaccaaaaaggcaaaaagaatcattatgaattttcacatttcaatagcagtaccaatct  6376500                                                           ------>MYB83                                                           ------>MYB46(1)                                                          --------->MYB52(1)                                                         --------->TOE1(2)                                                         --------->TOE2(2)                                                        --------->MYB46(3)                                                    <---------MYB52(2)                                             --------->MYB46(3)                                             <---------ATHB12                                            -------->P  <---------MYB55(2)                                          --------->MYB46(3)         ---------->DOF2                                         <---------At4g35610    ---------->DOF2                                         --------->At4g35610 ------->GAMYB           --------->TOE2(3) >WOX13(1)                              --------->ANAC46<---------MYB52(2) --------->MYB46(3)     --- ->CBF      --------->AHL20(2)    <---------AHL20(2)--------->MYB46(3)  <----------ID1  --------->AHL20(2)   aactcaaacaaaaaaaaaatatgtggtcttatctatttttatcagcaaccattaacaaaccaacgaaaaagaaaagaacaaacaaaacattaaaacatag  6376600         --------->GLK1(1)      --------->LBD16                                                                  --------->YAB1     --------->HSFB2a(2)                                                          ------------>CBF     <---------HSFB2a(2)                                                         --------->YAB1   --------->CCA1(2)                                                           <---------WOX13(1)   <------ZmHOX2a(2)                                                  --------->ANAC58 <---------ICU4  --------->AGP1                                                 --------->HSFB2a(2)  <---------ATHB12  --------->ARR11(3)                                  <---------CCA1(2)       <------------CBF  <---------ARR11(3)               <----------ID1 --------->YAB1 <---------HSFB2a(2)--------->WOX13(1)  <---------ARR14(2)           ---------->DOF2    --------->TOE1(3)   <---------ALFIN1<<<<<<<<<ARR2  --------->ARR14(2)  <---------ANAC58            --------->TOE2(3)   --------->ANAC58<<<<<<<<<ARR1 ------->DOF2         <---------ANAC58       ------------>CBF<----------DOF2 --------->ATHB12      --   aaaagatccagaattctaaattctacgtgctcaaaaagaaacaaaacttcaatcttaaatctcctttctggcacacccttcattgacaatcataacctct  6376700                      ----------->RAV1(1)                      ------>NtERF2                   ------>NtERF2                                 ----------->GT1               <---------O2                                ---------->DOF2               ===================================================bZIP_DOF               <---------TGA1a <---------AHL20(2)     <---------------AGL15               --------->TGA1a<---------WOX13(1)      --------------->AGL15     <------ZmHOX2a(2)      --------->WOX13(1) <------------CBF <---------AHL20(2)   ---------->DOF2 --------->ARR14(2)   <    ------------>CBF<------NtERF2        <---------YAB1---------->DOF2         <---------ARR14(2)   - -------->ID1  --------->O2 --------->ATHB12    <-----------RAV1(1)           <------ZmHOX2a(1) -----   tgtctcatcaatctctctcgtcgccaacattgattaatcgatttttatttgtgttgctaaagaaagaaagaaaaaatggaggatcagataagacaactta  6376800                                             <<<<<<<<<ARR1                                       <---                                             <<<<<<<<<ARR2                                  ------>NtERF2                                     --------->TOE1(3)                                      ---------                               --------->ANAC58                       <-----------HVH21   --------->SPL7                ----------->HVH21   <---------At4g35610              --------->LBD16      <---------LBD16               --------->SPL7  --------->ANAC46            <------NtERF2                 --------->MYB52(1)       --------->ETT(2)        --------->ANAC58          --------->ANAC46                ------>MYB83 ---------ARR11(3)          --------->DEAR3(1)--------->YAB1<---------ALFIN1             ------>MYB46(1) -------->ARR11(3)         <-----------RAV1(2)--------->TOE2(3)    <---------LBD16    <---------HSFB2a(1) ----->DOF2   --------->ARR14(2)    --------->At4g35610 <---------LBD16               --------->HSFB2a(1)   aagacattttcgaccggttcgacatggacgcagacggaagcttaacaatcttagaactcgcggcacttctccggtcactcggtctcaaaccttccggcga  6376900                                 --------->ANAC58                  <------MYB83                     <---------AtLEC2                              <------MYB46(1)      --------->MYB52(1)                --------->At4g35610            ---------->ID1      <---------DEAR3(2)------>ZmHOX2a(2)                --------->STY1(2)--------->ANAC46                 <---------TOE1(2)  ================                <---------STY1(2)--------->ANAC58  <---------ARR14(2)              <---------ARR11(3) ---ZmHOX2a(2)  <---------At4g35610  --------->MYB52(1)         <-------GAMYB      --------->ARR11(3) >LBD16      <---------MYB52(1)--------->MYB52(1)  --------->ARR14(2)            ------>ZmHOX2a(1)  <   tcaaatccatgttttgttagctagcatggactcaaacggcaacggttttgtcgaattcgatgagctcgttggtacaattcttcctgatcttaacgaagag  6377000                                                                              <---------ANAC58                                                                              <---------ANAC58                                                                             --------->ZAT2                                                                             --------->At4g35610                                                                             <---------ZAT2             --------->ANAC58                                         <---------RAP2.3(2)             --------->ANAC58                                         <---------DEAR3(1)             --------->ANAC46                                       --------->ALFIN1            --------->LBD16                                      <---------ICU4      <------ZmHOX2a(1)           <---------ANAC58                                  <-------TEIL    <---------At4g35610           <---------ANAC58                           --------->MYB52(1)--------->At4g35610     <---------ICU4                   --------->TOE1(2) <---------ANAC46<---------At4g35610    <---------ATHB12                <---------ATHB12  <---------DOF5.7(2)<----------CDC5 ------>ZmHOX2a(1)         <---------GLK1(2)         ----------->HVH21<---------RAP2.6(2) =======HOX2a_HOX2a        --------->ARR11(3)       --------->DOF5.7(2) <---------ZAT2 ---------MYB59            <---------ARR11(3)       --------->At5g28300 ----------->RAV1(2)   -------   gtcctaatcaattccgagcaattactcgagattttcaaatcgttcgatagagacggtaacgggttcataagtgcggctgagcttgcaggagcaatggcca  6377100               <---------ANAC46              <---------TOE1(3)              <---------TOE2(3)             <---------DOF5.7(2)           --------->DOF5.7(2)        --------->MYB46(3)        <---------ATHB12                       --------->At4g35610                               ----     <---------WRKY12                    ---------->DOF2                                         <---     <---------WRKY38(1)          <---------At4g35610                        <----------DOF2     ----    --------->WRKY18(1)        ------->GAMYB   <---------At4g35610 <---------ZAT6               <----   <-----------HVH21        --------->MYB52(1)--------->GLK1(2)    ----------->GT1              ----- ---------->AGL1    ---------->DOF2    <---------YAB1           <---------AtMYB61               <----   agatgggtcaaccattaacgtataaagaattaacggagatgatcaaagaagctgatacaaatggtgatggtgttataagctttggagagtttgcttcaat  6377200          --------->At4g35610      --------->GLK1(2)      --------->ARR11(3)      <---------ARR11(3)                       <---------ICU4      <---------ARR14(2)                      --------->ICU4      --------->ARR14(2)                      <---------YAB1 ----->YAB1                                  <---------ARR11(3)                 <---------HSFB2a(2) ------ICU4                              <---------ANAC58                       --------->HSFB2a(2) ----->ATHB51         <----------DOF2    <---------ANAC58           <---------AHL20(2) -----ATHB12 <-------GAMYB          <---------AHL20(2)     <----------DOF2   <---------YAB1 ---->ICU4<---------At4g35610       --------->AHL20(2)     <---------DAG2   --------->AHL20(2)------- -----ATHB51<---------MYB46(3)     --------->AHL20(2)   <---------YAB1    <---------------AGL15    --   tatggcaaaatctgctgttgattactttggattaaaaattaattcgtgatcatttcttatgctttttcatttattcatttttatagaaaatcgaattcat  6377300  Previous    Next  AGI:  At1g18520.1    Description:  TET11 (TETRASPANIN11). similar to TET12 (TETRASPANIN12) [Arabidopsis thaliana] (TAIR:AT5G23030.1); similar to senescence-associated protein 5 [Hemerocallis hybrid cultivar] (GB:AAC34855.1); contains InterPro domain CD9/CD37/CD63 antigen; (InterPro:IPR000301) Range:  from: 6374925    to: 6376309    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g18530.1    Description:  calmodulin, putative. similar to calmodulin, putative [Arabidopsis thaliana] (TAIR:AT3G25600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67981.1); contains InterPro domain Flagellar calcium-binding protein (calflagin); (InterPro:IPR003299); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) Range:  from: 6376776    to: 6377249    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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